Trimin1|173448|e_gw1.102.11.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|173448
Unique Name	Trimin1\|173448\|e_gw1.102.11.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	234

Homology

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BLAST of jgi.p|Trimin1|173448 vs. uniprot
Match: A0A835ZHY7_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHY7_9STRA)

HSP 1 Score: 477 bits (1227), Expect = 2.640e-170
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0

Query:    1 MLSSLTLFEGQSAAKRRLLEVQQWIEGQSKDKTAALSSKMRARNALLLTSVIAIQRALRGHQARLRVHQYMQEIAAASCIQRMWRGHKGRVVAQDLFWSRVQVAPTQYSLALMMQRSRRVQTISGWTEYFDTDVNCFWYMDNATRRSTWDAPEAFREALTCNWDPWPHPYRGAGEEPCRQAFKTHEEFQTHRATAHRWQCLACEAINAALSFPRCALCGSGSAMNARDNITAAD 234
            MLSSLTLFEGQSAAKRRLLEVQQWIEGQSKDKTAALSSKMRARNALLLTSVIAIQRALRGHQARLRVHQYMQEIAAASCIQRMWRGHKGRVVAQDLFWSRVQVAPTQYSLALMMQRSRRVQTISGWTEYFDTDVNCFWYMDNATRRSTWDAPEAFREALTCNWDPWPHPYRGAGEEPCRQAFKTHEEFQTHRATAHRWQCLACEAINAALSFPRCALCGSGSAMNARDNITAAD
Sbjct:    1 MLSSLTLFEGQSAAKRRLLEVQQWIEGQSKDKTAALSSKMRARNALLLTSVIAIQRALRGHQARLRVHQYMQEIAAASCIQRMWRGHKGRVVAQDLFWSRVQVAPTQYSLALMMQRSRRVQTISGWTEYFDTDVNCFWYMDNATRRSTWDAPEAFREALTCNWDPWPHPYRGAGEEPCRQAFKTHEEFQTHRATAHRWQCLACEAINAALSFPRCALCGSGSAMNARDNITAAD 234

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BLAST of jgi.p|Trimin1|173448 vs. uniprot
Match: D7FWY6_ECTSI (MORN repeat variant family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWY6_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 1.900e-39
Identity = 82/230 (35.65%), Postives = 119/230 (51.74%), Query Frame = 0

Query:   14 AKRRLLEVQQWIEGQSKDKTAALSSKMRARNALLLTSVIAIQRALRGHQARLRVHQYMQEIAAASCIQRMWRGHKGRVVAQDLF--------------------------WSRVQVAPTQYSLALMMQRSRRVQTISGWTEYFDTDVNCFWYMDNATRRSTWDAPEAFREALTCNWDPWPHPYRGAGEEPCRQAFKTHEEFQTHRATAHRWQCLACEAINAALSFPRCAL 217
            A RRL + ++W++G S       S+KM                   G+   L+  +  +   AA+ +Q  +RG +GR +A D                            W ++QV  T YSL L+ QRSR+VQ + GW EYFD D + FWY++N+T+ STW+AP+ F +++TC WDPWP PY    ++PCR+ F    EFQ HR  AH WQC +    N+ ++FPRC L
Sbjct:   14 ASRRLQQAREWVDGCS-------STKM-------------------GYWEDLKAAEADRREQAATAMQAAYRGWEGRQIAADRRAXXXXXXXXXXXXXXXXXXXXXTEERWKQLQVVRTSYSLKLLTQRSRQVQEVGGWVEYFDPDTSAFWYLENSTKHSTWNAPKDFSDSMTCVWDPWPVPYSSPLDKPCRKVFTNMAEFQAHRLNAHPWQCASWGQRNSGMTFPRCEL 217

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|173448 vs. uniprot

BLAST of jgi.p|Trimin1|173448 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835ZHY7_9STRA	2.640e-170	100.00	WW domain-containing protein n=1 Tax=Tribonema min...	[more]
D7FWY6_ECTSI	1.900e-39	35.65	MORN repeat variant family protein n=1 Tax=Ectocar...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000048	IQ motif, EF-hand binding site	SMART	SM00015	iq_5	coord: 72..94 e-value: 0.7 score: 18.9 coord: 46..68 e-value: 5.6 score: 15.8
IPR000048	IQ motif, EF-hand binding site	PFAM	PF00612	IQ	coord: 50..67 e-value: 0.0097 score: 15.6 coord: 75..90 e-value: 0.011 score: 15.5
IPR000048	IQ motif, EF-hand binding site	PROSITE	PS50096	IQ	coord: 47..76 score: 7.9129
None	No IPR available	GENE3D	1.20.5.190		coord: 49..92 e-value: 9.2E-9 score: 37.0
None	No IPR available	GENE3D	2.20.70.10		coord: 122..161 e-value: 3.3E-5 score: 25.1
IPR001202	WW domain	PROSITE	PS50020	WW_DOMAIN_2	coord: 120..154 score: 10.462501
IPR001202	WW domain	CDD	cd00201	WW	coord: 124..153 e-value: 0.00792429 score: 31.3442
IPR036020	WW domain superfamily	SUPERFAMILY	51045	WW domain	coord: 119..153
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 33..97

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_102	contig	Contig_102:520963..522128 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|173448	mRNA_11852	Tribonema minus UTEX_B_3156	mRNA	Contig_102 520963..522128 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|173448|e_gw1.102.11.1 ID=Trimin1|173448|e_gw1.102.11.1|Name=jgi.p|Trimin1|173448|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=234bp
MLSSLTLFEGQSAAKRRLLEVQQWIEGQSKDKTAALSSKMRARNALLLTS
VIAIQRALRGHQARLRVHQYMQEIAAASCIQRMWRGHKGRVVAQDLFWSR
VQVAPTQYSLALMMQRSRRVQTISGWTEYFDTDVNCFWYMDNATRRSTWD
APEAFREALTCNWDPWPHPYRGAGEEPCRQAFKTHEEFQTHRATAHRWQC
LACEAINAALSFPRCALCGSGSAMNARDNITAAD

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000048	IQ_motif_EF-hand-BS
IPR001202	WW_dom
IPR036020	WW_dom_sf
IPR027417	P-loop_NTPase