Trimin1|173335|e_gw1.101.111.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|173335
Unique NameTrimin1|173335|e_gw1.101.111.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length137
Homology
[Close]
BLAST of jgi.p|Trimin1|173335 vs. uniprot
Match: A0A835ZI45_9STRA (Histone H3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI45_9STRA)

HSP 1 Score: 253 bits (647), Expect = 4.420e-85
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 
Query:    1 IARTKQVARKSTGGKAPRKQLATKAAMKRAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKADLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRNETS 136
            IARTKQVARKSTGGKAPRKQLATKAAMKRAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKADLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRNETS
Sbjct:    1 IARTKQVARKSTGGKAPRKQLATKAAMKRAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKADLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRNETS 136
[Close]
BLAST of jgi.p|Trimin1|173335 vs. uniprot
Match: W4GZ05_9STRA (Histone H3 n=38 Tax=Oomycota TaxID=4762 RepID=W4GZ05_9STRA)

HSP 1 Score: 240 bits (612), Expect = 9.610e-80
Identity = 129/136 (94.85%), Postives = 130/136 (95.59%), Query Frame = 0 
Query:    1 IARTKQVARKSTGGKAPRKQLATKAAMKRAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKADLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRNETS 136
            +ARTKQ ARKSTGGKAPRKQLATKAA K APATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK DLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR E S
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
[Close]
BLAST of jgi.p|Trimin1|173335 vs. uniprot
Match: A0A6V1P6C6_HETAK (Histone H3 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P6C6_HETAK)

HSP 1 Score: 239 bits (609), Expect = 3.370e-79
Identity = 128/136 (94.12%), Postives = 130/136 (95.59%), Query Frame = 0 
Query:    1 IARTKQVARKSTGGKAPRKQLATKAAMKRAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKADLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRNETS 136
            +ARTKQ ARKSTGGKAPRKQLATKAA K APATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK DLR+QGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR E S
Sbjct:    7 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRYQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 142
[Close]
BLAST of jgi.p|Trimin1|173335 vs. uniprot
Match: A0A7S1BJN3_9STRA (Histone H3 n=22 Tax=Eukaryota TaxID=2759 RepID=A0A7S1BJN3_9STRA)

HSP 1 Score: 239 bits (609), Expect = 4.400e-79
Identity = 128/136 (94.12%), Postives = 130/136 (95.59%), Query Frame = 0 
Query:    1 IARTKQVARKSTGGKAPRKQLATKAAMKRAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKADLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRNETS 136
            +ARTKQ ARKSTGGKAPRKQLATKAA K APATGGVKKPHRYRPGTVALREIRRYQKST+LLIRKLPFQRLVREIAQDFK DLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR E S
Sbjct:   15 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 150
[Close]
BLAST of jgi.p|Trimin1|173335 vs. uniprot
Match: A0A1Z5K8H0_FISSO (Histone H3 n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A1Z5K8H0_FISSO)

HSP 1 Score: 238 bits (606), Expect = 7.900e-79
Identity = 127/136 (93.38%), Postives = 130/136 (95.59%), Query Frame = 0 
Query:    1 IARTKQVARKSTGGKAPRKQLATKAAMKRAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKADLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRNETS 136
            +ARTKQ ARKSTGGKAPRKQLATKAA K AP TGGVKKPHRYRPGTVALREIRRYQKST+LLIRKLPFQRLVREIAQDFK+DLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR E S
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
[Close]
BLAST of jgi.p|Trimin1|173335 vs. uniprot
Match: A0A7K4KKY2_9AVES (Histone H3 (Fragment) n=3 Tax=Bilateria TaxID=33213 RepID=A0A7K4KKY2_9AVES)

HSP 1 Score: 237 bits (604), Expect = 1.590e-78
Identity = 126/134 (94.03%), Postives = 129/134 (96.27%), Query Frame = 0 
Query:    1 IARTKQVARKSTGGKAPRKQLATKAAMKRAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKADLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRNE 134
            +ARTKQ ARKSTGGKAPRKQLATKAA KRAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR E
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKRAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
[Close]
BLAST of jgi.p|Trimin1|173335 vs. uniprot
Match: K0S7I6_THAOC (Histone domain-containing protein n=8 Tax=Bacillariophyta TaxID=2836 RepID=K0S7I6_THAOC)

HSP 1 Score: 239 bits (610), Expect = 2.220e-78
Identity = 128/136 (94.12%), Postives = 131/136 (96.32%), Query Frame = 0 
Query:    1 IARTKQVARKSTGGKAPRKQLATKAAMKRAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKADLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRNETS 136
            +ARTKQ ARKSTGGKAPRKQLATKAA K APATGGVKKPHRYRPGTVALREIRRYQKST+LLIRKLPFQRLVREIAQDFK+DLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR E S
Sbjct:   74 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 209
[Close]
BLAST of jgi.p|Trimin1|173335 vs. uniprot
Match: A7RJG4_NEMVE (Predicted protein n=6 Tax=Eumetazoa TaxID=6072 RepID=A7RJG4_NEMVE)

HSP 1 Score: 236 bits (602), Expect = 3.220e-78
Identity = 126/134 (94.03%), Postives = 128/134 (95.52%), Query Frame = 0 
Query:    1 IARTKQVARKSTGGKAPRKQLATKAAMKRAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKADLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRNE 134
            +ARTKQ ARKSTGGKAPRKQLATKAA K APATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRL+REIAQDFK DLRFQ SAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR E
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLIREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
[Close]
BLAST of jgi.p|Trimin1|173335 vs. uniprot
Match: D7G4I9_ECTSI (Similar to histone H3.2 n=2 Tax=PX clade TaxID=569578 RepID=D7G4I9_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 4.570e-78
Identity = 127/136 (93.38%), Postives = 130/136 (95.59%), Query Frame = 0 
Query:    1 IARTKQVARKSTGGKAPRKQLATKAAMKRAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKADLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRNETS 136
            +ARTKQ ARKSTG +APRKQLATKAA K APATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR E S
Sbjct:    1 MARTKQTARKSTGRQAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
[Close]
BLAST of jgi.p|Trimin1|173335 vs. uniprot
Match: E1ZFV1_CHLVA (Histone H3 n=11 Tax=Eukaryota TaxID=2759 RepID=E1ZFV1_CHLVA)

HSP 1 Score: 235 bits (600), Expect = 6.490e-78
Identity = 126/134 (94.03%), Postives = 128/134 (95.52%), Query Frame = 0 
Query:    1 IARTKQVARKSTGGKAPRKQLATKAAMKRAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKADLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRNE 134
            +ARTKQ ARKSTGGKAPRKQLATKAA K APATGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK DLRFQ SAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR E
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|173335 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZI45_9STRA4.420e-85100.00Histone H3 n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
W4GZ05_9STRA9.610e-8094.85Histone H3 n=38 Tax=Oomycota TaxID=4762 RepID=W4GZ... [more]
A0A6V1P6C6_HETAK3.370e-7994.12Histone H3 n=1 Tax=Heterosigma akashiwo TaxID=2829... [more]
A0A7S1BJN3_9STRA4.400e-7994.12Histone H3 n=22 Tax=Eukaryota TaxID=2759 RepID=A0A... [more]
A0A1Z5K8H0_FISSO7.900e-7993.38Histone H3 n=2 Tax=Bacillariophyta TaxID=2836 RepI... [more]
A0A7K4KKY2_9AVES1.590e-7894.03Histone H3 (Fragment) n=3 Tax=Bilateria TaxID=3321... [more]
K0S7I6_THAOC2.220e-7894.12Histone domain-containing protein n=8 Tax=Bacillar... [more]
A7RJG4_NEMVE3.220e-7894.03Predicted protein n=6 Tax=Eumetazoa TaxID=6072 Rep... [more]
D7G4I9_ECTSI4.570e-7893.38Similar to histone H3.2 n=2 Tax=PX clade TaxID=569... [more]
E1ZFV1_CHLVA6.490e-7894.03Histone H3 n=11 Tax=Eukaryota TaxID=2759 RepID=E1Z... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 3..17
score: 90.43
coord: 34..55
score: 93.58
coord: 114..135
score: 85.77
coord: 98..114
score: 96.93
coord: 17..31
score: 81.16
coord: 80..98
score: 76.54
coord: 58..75
score: 97.46
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 34..136
e-value: 9.5E-71
score: 251.0
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 1..134
IPR000164Histone H3/CENP-APROSITEPS00959HISTONE_H3_2coord: 67..75
IPR000164Histone H3/CENP-APROSITEPS00322HISTONE_H3_1coord: 15..21
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 2..136
e-value: 4.6E-73
score: 245.4
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..132
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 2..132
e-value: 2.2E-51
score: 173.6
NoneNo IPR availablePANTHERPTHR11426:SF198SUBFAMILY NOT NAMEDcoord: 1..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_101contigContig_101:507923..508333 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|173335mRNA_10834Tribonema minus UTEX_B_3156 mRNAContig_101 507923..508333 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|173335|e_gw1.101.111.1 ID=Trimin1|173335|e_gw1.101.111.1|Name=jgi.p|Trimin1|173335|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=137bp
IARTKQVARKSTGGKAPRKQLATKAAMKRAPATGGVKKPHRYRPGTVALR
EIRRYQKSTELLIRKLPFQRLVREIAQDFKADLRFQGSAVLALQEAAEAY
LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRNETS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000164Histone_H3/CENP-A
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3