Trimin1|172711|e_gw1.95.22.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|172711
Unique Name	Trimin1\|172711\|e_gw1.95.22.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	197

Homology

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BLAST of jgi.p|Trimin1|172711 vs. uniprot
Match: A0A835YGW4_9STRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGW4_9STRA)

HSP 1 Score: 381 bits (978), Expect = 1.380e-133
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0

Query:    1 MPIRVTWARARAQGACTAHSCSQIPLPPVHSAHACSTPHILVPLSHPPSPLSPLSSCLSPFPCHLFPPPSPVPSLPFLSSPPRRPPFSPSLPPPPFTAQGTLPCVSAQGATILAGGARVATAPDGNGGVYTALAASGALRAMAQRGVRYVHAFSIDNALARPGDAAFVGACVGAGAQCGAQCIWKRDAGTGGLVVP 196
            MPIRVTWARARAQGACTAHSCSQIPLPPVHSAHACSTPHILVPLSHPPSPLSPLSSCLSPFPCHLFPPPSPVPSLPFLSSPPRRPPFSPSLPPPPFTAQGTLPCVSAQGATILAGGARVATAPDGNGGVYTALAASGALRAMAQRGVRYVHAFSIDNALARPGDAAFVGACVGAGAQCGAQCIWKRDAGTGGLVVP
Sbjct:    1 MPIRVTWARARAQGACTAHSCSQIPLPPVHSAHACSTPHILVPLSHPPSPLSPLSSCLSPFPCHLFPPPSPVPSLPFLSSPPRRPPFSPSLPPPPFTAQGTLPCVSAQGATILAGGARVATAPDGNGGVYTALAASGALRAMAQRGVRYVHAFSIDNALARPGDAAFVGACVGAGAQCGAQCIWKRDAGTGGLVVP 196

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BLAST of jgi.p|Trimin1|172711 vs. uniprot
Match: A0A835YRE5_9STRA (Udp-n-acetylglucosamine pyrophosphorylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRE5_9STRA)

HSP 1 Score: 170 bits (431), Expect = 8.070e-47
Identity = 87/94 (92.55%), Postives = 90/94 (95.74%), Query Frame = 0

Query:   96 FTAQGTLPCVSAQGATILAGGARVATAPDGNGGVYTALAASGALRAMAQRGVRYVHAFSIDNALARPGDAAFVGACVGAGAQCGAQCIWKRDAG 189
            F +QGTLPCVSAQGA ILAGGARVATAPDGNGGVYTALA SGALRAMA RGVRYVHAFS+DNALARPGDAAFVGACVGAGAQCGAQC+WKRDAG
Sbjct:  210 FFSQGTLPCVSAQGAMILAGGARVATAPDGNGGVYTALAFSGALRAMAARGVRYVHAFSVDNALARPGDAAFVGACVGAGAQCGAQCVWKRDAG 303

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BLAST of jgi.p|Trimin1|172711 vs. uniprot
Match: A0A836C6R7_9STRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6R7_9STRA)

HSP 1 Score: 120 bits (301), Expect = 2.990e-30
Identity = 64/91 (70.33%), Postives = 69/91 (75.82%), Query Frame = 0

Query:   99 QGTLPCVSAQGATILAGGARVATAPDGNGGVYTALAASGALRAMAQRGVRYVHAFSIDNALARPGDAAFVGACVGAGAQCGAQCIWKRDAG 189
            +GTLPCVSAQGA +LAGGARVA APDGNGG                RGVRYVHAF++DNALARPGDAAFVGAC  A A CGAQC+WKRDAG
Sbjct:   68 RGTLPCVSAQGAMLLAGGARVAAAPDGNGG----------------RGVRYVHAFTVDNALARPGDAAFVGACSRAWAACGAQCVWKRDAG 142

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BLAST of jgi.p|Trimin1|172711 vs. uniprot
Match: A0A7S2FHR1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2FHR1_9DINO)

HSP 1 Score: 103 bits (256), Expect = 1.590e-24
Identity = 49/92 (53.26%), Postives = 62/92 (67.39%), Query Frame = 0

Query:   96 FTAQGTLPCVSAQGATILAGGARVATAPDGNGGVYTALAASGALRAMAQRGVRYVHAFSIDNALARPGDAAFVGACVGAGAQCGAQCIWKRD 187
            F  QGTLPC++++G  I+     VATAPDGNGG+Y AL  SG L+ +   GV+Y+H FS+DNAL RP D  FVG C   GA CG +C+WK  
Sbjct:    9 FFEQGTLPCLTSEGKIIMESAGVVATAPDGNGGLYPALHGSGCLQRLQTEGVKYLHVFSVDNALCRPADPRFVGYCTSRGADCGNKCVWKAS 100

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BLAST of jgi.p|Trimin1|172711 vs. uniprot
Match: A0A7S4UPE1_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UPE1_9DINO)

HSP 1 Score: 103 bits (257), Expect = 2.080e-22
Identity = 49/92 (53.26%), Postives = 61/92 (66.30%), Query Frame = 0

Query:   96 FTAQGTLPCVSAQGATILAGGARVATAPDGNGGVYTALAASGALRAMAQRGVRYVHAFSIDNALARPGDAAFVGACVGAGAQCGAQCIWKRD 187
            F AQGTLPC++ +G  I+     VATAPDGNGG+Y AL  SG +  M   GV+Y+H FS+DNAL RP D  FVG C+   A CG +C+WK  
Sbjct:  194 FFAQGTLPCMTTEGKLIMESAGMVATAPDGNGGLYPALQGSGCMARMQAAGVKYLHVFSVDNALCRPADPRFVGYCISKDADCGNKCVWKAS 285

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BLAST of jgi.p|Trimin1|172711 vs. uniprot
Match: A0A7S0VSA0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VSA0_9CRYP)

HSP 1 Score: 100 bits (248), Expect = 3.810e-21
Identity = 53/93 (56.99%), Postives = 64/93 (68.82%), Query Frame = 0

Query:   96 FTAQGTLPCVSAQGATILAGGARVATAPDGNGGVYTALAASGALRAMAQRGVRYVHAFSIDNALARPGDAAFVGACVGAGAQCGAQCIWKRDA 188
            F  QGTLPC+S  G  ++ G   VATAPDGNGG+Y ALA SG+L  M +RGV+YVHA S+DNAL  P D  F+G C+ AGA CGA+   K  A
Sbjct:  239 FFQQGTLPCLSTGGDVLMEGKGTVATAPDGNGGIYRALAESGSLEDMRKRGVKYVHASSVDNALVLPCDPLFLGCCIEAGADCGAKVCPKASA 331

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BLAST of jgi.p|Trimin1|172711 vs. uniprot
Match: A0A7S0UEU0_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UEU0_HEMAN)

HSP 1 Score: 97.1 bits (240), Expect = 9.780e-21
Identity = 52/93 (55.91%), Postives = 63/93 (67.74%), Query Frame = 0

Query:   96 FTAQGTLPCVSAQGATILAGGARVATAPDGNGGVYTALAASGALRAMAQRGVRYVHAFSIDNALARPGDAAFVGACVGAGAQCGAQCIWKRDA 188
            F  QGTLPC+S  G  ++    +VATAPDGNGG+Y ALA SG L  M +RGV+YVHA S+DNAL  P D  F+G CV +GA CGA+   K  A
Sbjct:   50 FFEQGTLPCLSMGGDVLMEAQGKVATAPDGNGGIYRALAESGCLADMKKRGVKYVHASSVDNALVLPCDPLFLGCCVESGADCGAKVCPKASA 142

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BLAST of jgi.p|Trimin1|172711 vs. uniprot
Match: A0A3F2RM09_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RM09_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.500e-20
Identity = 47/90 (52.22%), Postives = 63/90 (70.00%), Query Frame = 0

Query:   96 FTAQGTLPCVSAQGATILAGGARVATAPDGNGGVYTALAASGALRAMAQRGVRYVHAFSIDNALARPGDAAFVGACVGAGAQCGAQCIWK 185
            F  QGTLPC + +G  +L  G ++ATAPDGNGG+Y ALA+SGAL  +  RGV+Y+H FS+DNAL +  D  F+G C+   A CG + +WK
Sbjct:  217 FFPQGTLPCFTTEGKLMLESGHKLATAPDGNGGIYKALASSGALDQLQTRGVKYLHVFSVDNALCKAADPTFIGYCIDKQADCGNKVVWK 306

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BLAST of jgi.p|Trimin1|172711 vs. uniprot
Match: B8LBN3_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LBN3_THAPS)

HSP 1 Score: 96.3 bits (238), Expect = 4.330e-20
Identity = 44/92 (47.83%), Postives = 60/92 (65.22%), Query Frame = 0

Query:   96 FTAQGTLPCVSAQGATILAGGARVATAPDGNGGVYTALAASGALRAMAQRGVRYVHAFSIDNALARPGDAAFVGACVGAGAQCGAQCIWKRD 187
            F  QGTLP V+ +G  IL     +A APDGNGG+Y A+   G L++M +RG++Y+HAF +DNAL +P D  FVG C+   A CG + +WK  
Sbjct:   96 FFPQGTLPAVTPEGKMILETATSLAVAPDGNGGIYPAMVKHGVLKSMVERGIKYIHAFGVDNALVKPADPTFVGYCISQNADCGNKVLWKSS 187

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BLAST of jgi.p|Trimin1|172711 vs. uniprot
Match: A0A1Z5KQN2_FISSO (UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQN2_FISSO)

HSP 1 Score: 97.1 bits (240), Expect = 4.370e-20
Identity = 47/93 (50.54%), Postives = 62/93 (66.67%), Query Frame = 0

Query:   96 FTAQGTLPCVSAQGATILAGGARVATAPDGNGGVYTALAASGALRAMAQRGVRYVHAFSIDNALARPGDAAFVGACVGAGAQCGAQCIWKRDA 188
            F +QG LPC+   G  I+     VA APDGNGG+Y ++ +SGAL  M +RGV+Y+H FSIDNAL +P D  F+G C+  G+ CG +  WK DA
Sbjct:  185 FFSQGMLPCMKDDGKIIMETAGEVAMAPDGNGGIYPSMVSSGALADMEKRGVKYLHVFSIDNALIKPADPVFMGYCINQGSDCGNKVCWKVDA 277

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|172711 vs. uniprot

BLAST of jgi.p|Trimin1|172711 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YGW4_9STRA	1.380e-133	100.00	Nucleotide-diphospho-sugar transferase n=1 Tax=Tri...	[more]
A0A835YRE5_9STRA	8.070e-47	92.55	Udp-n-acetylglucosamine pyrophosphorylase n=1 Tax=...	[more]
A0A836C6R7_9STRA	2.990e-30	70.33	Nucleotide-diphospho-sugar transferase n=1 Tax=Tri...	[more]
A0A7S2FHR1_9DINO	1.590e-24	53.26	Hypothetical protein (Fragment) n=1 Tax=Alexandriu...	[more]
A0A7S4UPE1_9DINO	2.080e-22	53.26	Hypothetical protein n=1 Tax=Alexandrium monilatum...	[more]
A0A7S0VSA0_9CRYP	3.810e-21	56.99	Hypothetical protein (Fragment) n=1 Tax=Hemiselmis...	[more]
A0A7S0UEU0_HEMAN	9.780e-21	55.91	Hypothetical protein (Fragment) n=1 Tax=Hemiselmis...	[more]
A0A3F2RM09_9STRA	1.500e-20	52.22	Uncharacterized protein n=4 Tax=Phytophthora kerno...	[more]
B8LBN3_THAPS	4.330e-20	47.83	Predicted protein (Fragment) n=1 Tax=Thalassiosira...	[more]
A0A1Z5KQN2_FISSO	4.370e-20	50.54	UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029044	Nucleotide-diphospho-sugar transferases	GENE3D	3.90.550.10	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	coord: 95..196 e-value: 4.7E-29 score: 103.4
IPR029044	Nucleotide-diphospho-sugar transferases	SUPERFAMILY	53448	Nucleotide-diphospho-sugar transferases	coord: 97..190
IPR002618	UDPGP family	PFAM	PF01704	UDPGP	coord: 98..189 e-value: 4.9E-12 score: 45.2
IPR039741	UDP-sugar pyrophosphorylase	PANTHER	PTHR11952	UDP- GLUCOSE PYROPHOSPHORYLASE	coord: 96..188
None	No IPR available	PANTHER	PTHR11952:SF2	LD24639P	coord: 96..188

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_95	contig	Contig_95:134863..135453 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|172711	mRNA_14638	Tribonema minus UTEX_B_3156	mRNA	Contig_95 134863..135453 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|172711|e_gw1.95.22.1 ID=Trimin1|172711|e_gw1.95.22.1|Name=jgi.p|Trimin1|172711|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=197bp
MPIRVTWARARAQGACTAHSCSQIPLPPVHSAHACSTPHILVPLSHPPSP
LSPLSSCLSPFPCHLFPPPSPVPSLPFLSSPPRRPPFSPSLPPPPFTAQG
TLPCVSAQGATILAGGARVATAPDGNGGVYTALAASGALRAMAQRGVRYV
HAFSIDNALARPGDAAFVGACVGAGAQCGAQCIWKRDAGTGGLVVP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029044	Nucleotide-diphossugar_trans
IPR002618	UDPGP_fam
IPR039741	UDP-sugar_pyrophosphorylase