Trimin1|172457|e_gw1.93.33.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|172457
Unique NameTrimin1|172457|e_gw1.93.33.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length106
Homology
BLAST of jgi.p|Trimin1|172457 vs. uniprot
Match: A0A835YIT2_9STRA (G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIT2_9STRA)

HSP 1 Score: 220 bits (561), Expect = 5.840e-73
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
Query:    1 MGKSSLLNTLLGRRRVSTSATPGHTKHLQTMHVTKDLVLCDSPGVVHPQVGVPRALQVIFGLYPIAQVREPFTHVRFIAEHCWPPLPAAFGLLHVARQVRARVWC 105
            MGKSSLLNTLLGRRRVSTSATPGHTKHLQTMHVTKDLVLCDSPGVVHPQVGVPRALQVIFGLYPIAQVREPFTHVRFIAEHCWPPLPAAFGLLHVARQVRARVWC
Sbjct:    1 MGKSSLLNTLLGRRRVSTSATPGHTKHLQTMHVTKDLVLCDSPGVVHPQVGVPRALQVIFGLYPIAQVREPFTHVRFIAEHCWPPLPAAFGLLHVARQVRARVWC 105          
BLAST of jgi.p|Trimin1|172457 vs. uniprot
Match: A0A7S0YTR8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YTR8_9CRYP)

HSP 1 Score: 119 bits (298), Expect = 8.050e-32
Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 0
Query:    1 MGKSSLLNTLLGRRRVSTSATPGHTKHLQTMHVTKDLVLCDSPGVVHPQVGVPRALQVIFGLYPIAQVREPFTHVRFIAEHCWPPLPAAFGL 92
            MGKSS++N++ GR+ VS+S +PGHTKH+QT  +   +  CDSPG+V PQVGVPRA QV+FG +PIAQ+REP++ VR +AE C P +PA F L
Sbjct:   23 MGKSSVMNSIFGRKVVSSSRSPGHTKHIQTNFLNPGVCFCDSPGIVSPQVGVPRAYQVLFGSFPIAQLREPYSAVRIVAESCEPSIPALFRL 114          
BLAST of jgi.p|Trimin1|172457 vs. uniprot
Match: A0A813DWA4_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DWA4_POLGL)

HSP 1 Score: 123 bits (309), Expect = 6.980e-31
Identity = 58/92 (63.04%), Postives = 73/92 (79.35%), Query Frame = 0
Query:    1 MGKSSLLNTLLGRRRVSTSATPGHTKHLQTMHVTKDLVLCDSPGVVHPQVGVPRALQVIFGLYPIAQVREPFTHVRFIAEHCWPPLPAAFGL 92
            MGKSS++N + GR+ VS+SATPGHTKH QT+ +++ +  CDSPGVV P++ VP+ALQV+FG Y IAQVREPF  VRFIAEHC PPL +   L
Sbjct:  298 MGKSSIINAVFGRKLVSSSATPGHTKHFQTLFLSRGVCFCDSPGVVCPKLAVPKALQVVFGSYRIAQVREPFHIVRFIAEHCHPPLASILKL 389          
BLAST of jgi.p|Trimin1|172457 vs. uniprot
Match: A0A7S0Y0A9_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y0A9_HEMAN)

HSP 1 Score: 116 bits (291), Expect = 2.560e-30
Identity = 52/92 (56.52%), Postives = 71/92 (77.17%), Query Frame = 0
Query:    1 MGKSSLLNTLLGRRRVSTSATPGHTKHLQTMHVTKDLVLCDSPGVVHPQVGVPRALQVIFGLYPIAQVREPFTHVRFIAEHCWPPLPAAFGL 92
            MGKSS++N++ G++ VS+S TPGHTKH+QT  +T+ +  CDSPG+V PQ GVP++ Q +FG YPIAQ+REP++ VR IAE C PPL   + L
Sbjct:   52 MGKSSVMNSIFGQKMVSSSRTPGHTKHIQTHFLTQSVCFCDSPGIVSPQTGVPKSYQALFGSYPIAQLREPYSAVRHIAEACQPPLQDLYRL 143          
BLAST of jgi.p|Trimin1|172457 vs. uniprot
Match: A0A7S4NPW6_GUITH (Hypothetical protein (Fragment) n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NPW6_GUITH)

HSP 1 Score: 119 bits (298), Expect = 4.220e-29
Identity = 55/92 (59.78%), Postives = 73/92 (79.35%), Query Frame = 0
Query:    1 MGKSSLLNTLLGRRRVSTSATPGHTKHLQTMHVTKDLVLCDSPGVVHPQVGVPRALQVIFGLYPIAQVREPFTHVRFIAEHCWPPLPAAFGL 92
            MGKSS++N++ G++ VS+S+TPGHTKH QT+ +TK +  CDSPGVV P++ +PR LQVIFG Y IAQVREP++ +RFIAE C PPL   + L
Sbjct:  343 MGKSSVINSIFGKKVVSSSSTPGHTKHFQTLFLTKRVCFCDSPGVVCPKLKIPRTLQVIFGSYRIAQVREPYSIIRFIAEKCDPPLSEVYAL 434          
BLAST of jgi.p|Trimin1|172457 vs. uniprot
Match: A0A7S1B1N0_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1B1N0_NOCSC)

HSP 1 Score: 114 bits (285), Expect = 4.900e-28
Identity = 52/86 (60.47%), Postives = 70/86 (81.40%), Query Frame = 0
Query:    1 MGKSSLLNTLLGRRRVSTSATPGHTKHLQTMHVTKDLVLCDSPGVVHPQVGVPRALQVIFGLYPIAQVREPFTHVRFIAEHCWPPL 86
            MGKSS++N + G + VS+SATPGHTKH QT+ +++ +  CDSPG+V P++ VP+A+QVIFG + IAQVREP+  VRFIAE C+PPL
Sbjct:  139 MGKSSVINAVFGEKLVSSSATPGHTKHFQTLFLSRGVCFCDSPGIVCPKLHVPKAVQVIFGSFRIAQVREPYHVVRFIAERCYPPL 224          
BLAST of jgi.p|Trimin1|172457 vs. uniprot
Match: A0A5D6XG31_9STRA (CP-type G domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XG31_9STRA)

HSP 1 Score: 112 bits (281), Expect = 3.930e-27
Identity = 60/103 (58.25%), Postives = 70/103 (67.96%), Query Frame = 0
Query:    1 MGKSSLLNTLLGRRRVSTSATPGHTKHLQTMHVTKD-----------LVLCDSPGVVHPQVGVPRALQVIFGLYPIAQVREPFTHVRFIAEHCWPPLPAAFGL 92
            +GKSSLLN L GR+ VS SATPGHTKHLQT    +            +VLCD PGVV P+ GVP ALQ +FG +PIAQ REPF+ VRFIAE+C PPL   + L
Sbjct:  304 VGKSSLLNALFGRKLVSVSATPGHTKHLQTHFFERAELLERGDAFRRVVLCDCPGVVFPRFGVPVALQTLFGSFPIAQTREPFSAVRFIAENCVPPLHELYKL 406          
BLAST of jgi.p|Trimin1|172457 vs. uniprot
Match: A0A3M6VTC7_9STRA (G domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VTC7_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.300e-26
Identity = 59/117 (50.43%), Postives = 75/117 (64.10%), Query Frame = 0
Query:    1 MGKSSLLNTLLGRRRVSTSATPGHTKHLQTMHVTK------------DLVLCDSPGVVHPQVGVPRALQVIFGLYPIAQVREPFTHVRFIAEHCWPPLPAAFGLLHVARQVRARVWC 105
            +GKSSLLN+L GR+ VS SATPGHTKH+QT +  +             +++CD PGVV P+  VP  LQ++FG +PIAQ REPF+ VRFIAE+C P L   + L HV       VWC
Sbjct:  286 VGKSSLLNSLFGRKLVSVSATPGHTKHMQTHYFDRVEMLERNDNTYSRILMCDCPGVVFPRFNVPVLLQILFGSFPIAQTREPFSVVRFIAENCVPHLHEVYKLKHVEED-DDDVWC 401          
BLAST of jgi.p|Trimin1|172457 vs. uniprot
Match: F4PMX1_CAVFA (Guanine nucleotide binding protein 1 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PMX1_CAVFA)

HSP 1 Score: 111 bits (278), Expect = 2.240e-26
Identity = 52/94 (55.32%), Postives = 73/94 (77.66%), Query Frame = 0
Query:    1 MGKSSLLNTLLGRRRVSTSATPGHTKHLQTMHVTKDLVLCDSPGVVHPQVGVPRALQVIFGLYPIAQVREPFTHVRFIAEHCWPPLPAAFGLLH 94
            +GKSSL+N L+G++ VSTS TPGHTKH QT+ +TK +VLCD PG+V P +  P++LQV+ GLYPIAQVREP++ +R++A+    P+   +GL H
Sbjct:  439 VGKSSLINGLMGKKVVSTSRTPGHTKHFQTIFLTKGIVLCDCPGLVFPALDRPKSLQVLCGLYPIAQVREPYSAIRYLADRV--PIEKVYGLQH 530          
BLAST of jgi.p|Trimin1|172457 vs. uniprot
Match: A0A7S0UNJ5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0UNJ5_9CHLO)

HSP 1 Score: 103 bits (257), Expect = 7.720e-26
Identity = 47/98 (47.96%), Postives = 67/98 (68.37%), Query Frame = 0
Query:    1 MGKSSLLNTLLGRRRVSTSATPGHTKHLQTMHVTKDLVLCDSPGVVHPQVGVPRALQVIFGLYPIAQVREPFTHVRFIAEHCWPPLPAAFGLLHVARQ 98
            +GKS+ +N LLG  RV+ S+ PG TKH QT  +   L+LCD PG+V P++GVP A+QV++G +PIA+  +P+  VR++AE  WP L    GL  VA +
Sbjct:   74 VGKSTTVNALLGAHRVAVSSHPGRTKHYQTHRMASRLLLCDCPGLVFPRIGVPVAVQVLYGSFPIAKASDPYAVVRYLAERIWPRLHVTLGLRRVAEE 171          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|172457 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YIT2_9STRA5.840e-73100.00G domain-containing protein n=1 Tax=Tribonema minu... [more]
A0A7S0YTR8_9CRYP8.050e-3258.70Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A813DWA4_POLGL6.980e-3163.04Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7S0Y0A9_HEMAN2.560e-3056.52Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S4NPW6_GUITH4.220e-2959.78Hypothetical protein (Fragment) n=2 Tax=Guillardia... [more]
A0A7S1B1N0_NOCSC4.900e-2860.47Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A5D6XG31_9STRA3.930e-2758.25CP-type G domain-containing protein n=1 Tax=Pythiu... [more]
A0A3M6VTC7_9STRA1.300e-2650.43G domain-containing protein n=1 Tax=Peronospora ef... [more]
F4PMX1_CAVFA2.240e-2655.32Guanine nucleotide binding protein 1 n=1 Tax=Caven... [more]
A0A7S0UNJ5_9CHLO7.720e-2647.96Hypothetical protein (Fragment) n=1 Tax=Polytomell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 2..47
e-value: 2.6E-10
score: 40.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..49
e-value: 7.7E-16
score: 60.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..53
NoneNo IPR availablePIRSRPIRSR006230-1PIRSR006230-1coord: 2..53
e-value: 1.7E-13
score: 48.3
NoneNo IPR availablePANTHERPTHR45709:SF3GUANINE NUCLEOTIDE-BINDING PROTEIN-LIKE 1coord: 2..97
IPR043358Ras GTPase GNL1-likePANTHERPTHR45709LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATEDcoord: 2..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_93contigContig_93:265403..266493 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|172457mRNA_12043Tribonema minus UTEX_B_3156 mRNAContig_93 265403..266493 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|172457|e_gw1.93.33.1 ID=Trimin1|172457|e_gw1.93.33.1|Name=jgi.p|Trimin1|172457|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=106bp
MGKSSLLNTLLGRRRVSTSATPGHTKHLQTMHVTKDLVLCDSPGVVHPQV
GVPRALQVIFGLYPIAQVREPFTHVRFIAEHCWPPLPAAFGLLHVARQVR
ARVWC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP-bd
IPR027417P-loop_NTPase
IPR043358GNL1-like