Trimin1|172453|e_gw1.93.60.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|172453
Unique NameTrimin1|172453|e_gw1.93.60.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length235
Homology
BLAST of jgi.p|Trimin1|172453 vs. uniprot
Match: A0A835YQF0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF0_9STRA)

HSP 1 Score: 431 bits (1107), Expect = 5.420e-152
Identity = 233/234 (99.57%), Postives = 233/234 (99.57%), Query Frame = 0
Query:    1 MCALATCAAVQAQWDGGLNPREDEYFGARMRQGQGRNLYQEPAKGPGVLPYLGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELRIEELQQAAVDAGMDLGETQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQRKEDAXXXXXXXXXXXXXXSAQYNINQQRR 234
            MCALATCAAVQAQWDGGLNPREDEYFGARMRQGQGRNLYQEPAKGPGVLPYLGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELRIEELQQAAVDAGMDLGETQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQRKEDAXXXXXXXXXXXXX SAQYNINQQRR
Sbjct:    1 MCALATCAAVQAQWDGGLNPREDEYFGARMRQGQGRNLYQEPAKGPGVLPYLGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELRIEELQQAAVDAGMDLGETQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQRKEDAXXXXXXXXXXXXXGSAQYNINQQRR 234          
BLAST of jgi.p|Trimin1|172453 vs. uniprot
Match: A0A836CPR7_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPR7_9STRA)

HSP 1 Score: 257 bits (657), Expect = 2.560e-83
Identity = 148/232 (63.79%), Postives = 183/232 (78.88%), Query Frame = 0
Query:    4 LATCAAVQAQWDGGLNPREDEYFGARMRQGQGRN-LYQEPAKGPGVLPYLGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELRIEELQQAAVDAGMDLGETQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQRKEDAXXXXXXXXXXXXXXSAQYNINQQRR 234
            L   A V++QWDGG++PRE+EYF ARMRQ Q +  LYQEP +   +LP +GG++GG+L+D  LT++A +K    ++ D+KAL  +L + R+ E+ K+L  L NLE  V+DAELRIEELQQAAVDAGMD+  TQ EVDY EFKQPDAN+D+RI+RAEF+AYIA+YL+QYPHLRREDMP+FEDFD + DG V FKEWQ YL+RQRKEDAXXXXXXXXXXXXXX      NQ RR
Sbjct:   15 LLALAVVRSQWDGGMDPREEEYFAARMRQPQRQGGLYQEPQRKQSMLPLVGGLVGGWLLDMQLTRKADRKRKLSHEHDKKALAQRLQKHRNAEVNKKLVNLANLEALVEDAELRIEELQQAAVDAGMDISATQAEVDYEEFKQPDANHDNRISRAEFNAYIADYLRQYPHLRREDMPKFEDFDSSRDGSVNFKEWQMYLERQRKEDAXXXXXXXXXXXXXXXXXXXANQYRR 246          
BLAST of jgi.p|Trimin1|172453 vs. uniprot
Match: D7FR63_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR63_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 3.520e-33
Identity = 86/224 (38.39%), Postives = 124/224 (55.36%), Query Frame = 0
Query:    3 ALATCAAVQAQWDGGLNPREDEYFGARMRQG-QGRNLYQEPAKGPGVLPYLGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELRIEELQQAAVDAGMDLGE-----------------TQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQRKED 208
            +LAT   V    D  +N  EDEYFGARM++  QG  LYQEP +G   L  L G + G  ++   + R+AKK  K  + +  A  A+  + RD  + +R   +  L  +V++A++++ +L  AA DAG+DLG                   Q  ++Y EFKQPD + D+ I++ EF  YI +YL  YP     D+P FEDFD   DG+V F EWQ YLDR +++D
Sbjct:   12 SLATSVMVAGYDDRPMN--EDEYFGARMQEHHQGAGLYQEP-QGSNKLVLLAGAIAGASIEWWWSARSAKKGNKLLEQESAAFIAEWNKERDALMARRTYPIKLLAHEVEEADVQLMQLVAAAEDAGVDLGAGGSGLGGGATRPKARSIQQDNMEYEEFKQPDTDGDNVISKTEFYQYIRKYLSLYPDTAEMDIPHFEDFDLNNDGVVSFDEWQMYLDRHQQQD 232          
BLAST of jgi.p|Trimin1|172453 vs. uniprot
Match: A0A7S2SJ01_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJ01_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.900e-19
Identity = 42/67 (62.69%), Postives = 51/67 (76.12%), Query Frame = 0
Query:  139 DYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQR 205
            DY EFKQPDAN DD I+RAEFS YI  Y+K YPH+  E+ P FEDFD   DG+V F+EWQ+YL +Q+
Sbjct:  131 DYEEFKQPDANGDDVISRAEFSQYIRNYMKAYPHIAPEEYPTFEDFDVNRDGLVTFQEWQEYLYQQQ 197          
BLAST of jgi.p|Trimin1|172453 vs. uniprot
Match: A0A482SNT9_9ARCH (EF-hand domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SNT9_9ARCH)

HSP 1 Score: 91.7 bits (226), Expect = 2.060e-19
Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 0
Query:  130 DLGETQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQRKEDA 209
            +L +   E DY EFK PD NNDD I+RAEF+AY+ +YL  +P L   D P+F+DFD   DG+V F EWQK+L +Q+ ++A
Sbjct:   50 ELEKETVERDYEEFKAPDTNNDDMISRAEFNAYVTKYLSSFPELSEADFPKFDDFDQDEDGLVSFDEWQKFLVQQKLQEA 129          
BLAST of jgi.p|Trimin1|172453 vs. uniprot
Match: A0A7S2VWM5_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VWM5_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 3.600e-16
Identity = 54/159 (33.96%), Postives = 80/159 (50.31%), Query Frame = 0
Query:   43 AKGPGVLPYLGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELRIEELQQAAVDAGMDLGETQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYL 201
            A G G+  +L   LGGF+V +  + R  + L K +  ++K L            T+    +  ++ Q+ +   + E  +  AV           + DY EFKQPD + DDRI+RAEF+ Y+  YL  YP L  +D PRFEDFD   DG V F E+ + +
Sbjct:   47 AGGGGMRTWLFAGLGGFVVGKLHSGRKVRSLKKQHAKEQKKL-----------YTQYYNDVYKMQEQINEYAYQAEHYKSVAVQVQESAELDAMQRDYDEFKQPDIDGDDRISRAEFNMYVKNYLSNYPGLAEKDYPRFEDFDHDHDGYVSFSEYSQQM 194          
BLAST of jgi.p|Trimin1|172453 vs. uniprot
Match: A0A7S2LGL3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGL3_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.110e-15
Identity = 56/157 (35.67%), Postives = 79/157 (50.32%), Query Frame = 0
Query:   52 LGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELRI--EELQQAAVDAGMDLGETQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQRK 206
            +GG LG     +  + R   KL K +  ++KAL  +                   ++Q Q+AEL    E+L+  A +          + DY EFKQPD + DDRI+RAEF+ Y+  YL  YP L  +DMP+FEDFD   DG V F E+ + +  Q K
Sbjct:   70 IGGALGWLAGGKFHSNRTKTKLNKKHKKEQKALYTQYYN-------------DVYQLQTQNAELAYLAEQLKTHARNVEEQAELDALQRDYDEFKQPDVDGDDRISRAEFNHYVKNYLSNYPGLTEKDMPKFEDFDHDNDGSVSFSEYAEQMALQTK 213          
BLAST of jgi.p|Trimin1|172453 vs. uniprot
Match: A0A1E7FKY8_9STRA (EF-hand domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKY8_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.590e-15
Identity = 59/190 (31.05%), Postives = 100/190 (52.63%), Query Frame = 0
Query:   25 YFGARMRQGQGRNLYQEPAKGPGVLPYLG-GILGGFLVDRHLTKRAAKKLAKGYDADRKALEAK----LVRIRDDE--ITKRLKILTNLEVQVQDAELRIEELQQAAVDAGMDLGETQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQRKE 207
            Y+    ++G    +   P  G G +  +  GI    L  +    RA K+L + + +++K L ++    + ++ D    + ++++ LT L VQ  +++  +E LQ+                DY EFKQPD ++DDRI+RAEFS Y+ +YL  YP L  +D P+FEDFD  G+G V F+E+   +  Q ++
Sbjct:   62 YYEYAEKKGDAAAMPGGPGGGAGAMKLVATGITAWVLGAKFHVGRATKELKRKHKSEQKKLYSQYYNDVYKLGDQNSLLQEQIEDLTEL-VQKTESKAELEALQR----------------DYDEFKQPDLDSDDRISRAEFSMYVKDYLSNYPGLTEKDYPKFEDFDHDGNGFVSFEEYSTQMAVQAEQ 234          
BLAST of jgi.p|Trimin1|172453 vs. uniprot
Match: A0A6U3WRH6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3WRH6_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 7.500e-15
Identity = 50/140 (35.71%), Postives = 72/140 (51.43%), Query Frame = 0
Query:   68 RAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELRIEELQQAAVDAGMDLGETQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQRKE 207
            R AKKL K +  D+K L            T+    +  LE Q  + +L I++L    +D          + +Y EFKQPD + DDRI+R EF  Y+  YL  YP L  +D P+FE+FD   DG V F+E+ + +  Q +E
Sbjct:   38 RVAKKLTKKHKQDQKTL-----------YTQYYNDVYKLEEQKAEQQLIIDQLNNKLLDTSEQHEMENLQREYDEFKQPDIDGDDRISRTEFHMYVKNYLSNYPGLTEKDYPKFEEFDHDKDGYVSFQEYAQQMAVQAQE 166          
BLAST of jgi.p|Trimin1|172453 vs. uniprot
Match: A0A7S3Q1R5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q1R5_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 4.640e-14
Identity = 70/221 (31.67%), Postives = 106/221 (47.96%), Query Frame = 0
Query:    1 MCALATCAAVQAQWDGGLNPREDEYFGARMRQGQGRNLY----------QEPAKGPGV--LPYLGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELR--IEELQQAAVDAGMDLGETQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQRKE 207
            + AL T A+ Q   D G+ P   ++       GQ  NLY          Q+ A G G+  +   GG+ G     ++ + +A K L K +  + K L ++      +++ K         +Q Q+AEL   +++LQ        +      + DY EFKQPD + DDRI+RAEF  Y+  YL  YP L  +D PRFE+FD   DG V F E+ + +  Q K+
Sbjct:   14 LAALLTLASAQ---DYGMQPDYTDFADG----GQEDNLYADYAMKQAEKQDGASGGGMVKMAIFGGV-GWVAGAKYHSAKATKNLKKKHMKEAKTLYSQYY----NDVYK---------LQEQNAELAEAVKKLQGMLNSVESEREMEVMQRDYDEFKQPDVDGDDRISRAEFQMYVKNYLANYPGLTEKDYPRFEEFDHDHDGYVSFTEYSQQMALQAKK 213          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|172453 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A835YQF0_9STRA5.420e-15299.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CPR7_9STRA2.560e-8363.79EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
D7FR63_ECTSI3.520e-3338.39EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
A0A7S2SJ01_9STRA1.900e-1962.69Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A482SNT9_9ARCH2.060e-1951.25EF-hand domain-containing protein n=1 Tax=archaeon... [more]
A0A7S2VWM5_9STRA3.600e-1633.96Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]
A0A7S2LGL3_9STRA1.110e-1535.67Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A1E7FKY8_9STRA2.590e-1531.05EF-hand domain-containing protein n=1 Tax=Fragilar... [more]
A0A6U3WRH6_9STRA7.500e-1535.71Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S3Q1R5_9STRA4.640e-1431.67Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 103..130
NoneNo IPR availableGENE3D1.10.238.10coord: 135..208
e-value: 3.2E-8
score: 34.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..234
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 147..159
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 93..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_93contigContig_93:11219..15749 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|172453mRNA_12008Tribonema minus UTEX_B_3156 mRNAContig_93 11219..15749 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|172453|e_gw1.93.60.1 ID=Trimin1|172453|e_gw1.93.60.1|Name=jgi.p|Trimin1|172453|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=235bp
MCALATCAAVQAQWDGGLNPREDEYFGARMRQGQGRNLYQEPAKGPGVLP
YLGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRL
KILTNLEVQVQDAELRIEELQQAAVDAGMDLGETQTEVDYAEFKQPDANN
DDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKY
LDRQRKEDAAAAAAEAKKQAAGGSAQYNINQQRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair