Trimin1|172383|e_gw1.92.85.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|172383
Unique NameTrimin1|172383|e_gw1.92.85.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length210
Homology
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BLAST of jgi.p|Trimin1|172383 vs. uniprot
Match: A0A836C7D2_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7D2_9STRA)

HSP 1 Score: 251 bits (642), Expect = 5.350e-82
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0 
Query:    1 MSQFQQKQLAAAQSTVARSFQETNVHLFCEQGDLAEVRKAIEEKGEIVDKRDTRLQTPLHCACTGGHAQAMQVASYLLSXXXXXXXXXXXXXXXXXXXXXXXXAECCKMLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPMDVIGELCYVRHDIAKAIKTKVCVVRRGVYMRHTSMWVLHTVLVFPSIH 209
            MSQFQQKQLAAAQSTVARSFQETNVHLFCEQGDLAEVRKAIEEKGEIVDKRDTRLQTPLHCACTGGHAQAMQVASYLLSXXXXXXXXXXXXXXXXXXXXXXXXAECCKMLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPMDVIGELCYVRHDIAKAIKTKVCVVRRGVYMRHTSMWVLHTVLVFPSIH
Sbjct:    1 MSQFQQKQLAAAQSTVARSFQETNVHLFCEQGDLAEVRKAIEEKGEIVDKRDTRLQTPLHCACTGGHAQAMQVASYLLSXXXXXXXXXXXXXXXXXXXXXXXXAECCKMLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPMDVIGELCYVRHDIAKAIKTKVCVVRRGVYMRHTSMWVLHTVLVFPSIH 209
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BLAST of jgi.p|Trimin1|172383 vs. uniprot
Match: D8LNE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNE6_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 3.500e-13
Identity = 37/73 (50.68%), Postives = 52/73 (71.23%), Query Frame = 0 
Query:    1 MSQFQQKQLAAAQSTVARSFQETNVHLFCEQGDLAEVRKAIEEKGEIVDKRDTRLQTPLHCACTGGHAQAMQV 73
            MSQ+Q  +   A S V +++QETN+HLF E G+LAEV++ + + GE+VDKR+TR QT LH AC GGH +   +
Sbjct:    1 MSQWQLHKTEIASSEVQQTYQETNLHLFAENGNLAEVQRCLAD-GEMVDKRNTRRQTALHSACLGGHHEVADI 72
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|172383 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836C7D2_9STRA5.350e-82100.00Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
D8LNE6_ECTSI3.500e-1350.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 123..152
e-value: 2.0E-5
score: 34.0
coord: 54..86
e-value: 0.61
score: 19.1
coord: 90..119
e-value: 5.2E-5
score: 32.6
coord: 20..49
e-value: 3400.0
score: 1.0
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 76..150
e-value: 9.8E-15
score: 54.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 90..122
score: 11.70115
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 123..155
score: 13.14349
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 54..89
score: 11.48747
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..188
e-value: 6.6E-43
score: 149.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 20..163
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 4..162
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 90..122
score: 10.338512
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 54..88
score: 10.205854
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 123..154
score: 11.771206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_92contigContig_92:517833..520416 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|172383mRNA_14618Tribonema minus UTEX_B_3156 mRNAContig_92 517833..520416 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|172383|e_gw1.92.85.1 ID=Trimin1|172383|e_gw1.92.85.1|Name=jgi.p|Trimin1|172383|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=210bp
MSQFQQKQLAAAQSTVARSFQETNVHLFCEQGDLAEVRKAIEEKGEIVDK
RDTRLQTPLHCACTGGHAQAMQVASYLLSKGADAEAKDGQLVTPLHCAAA
GGNAECCKMLIAKGAVVNARDDKSATPLHWACQRGHMDCVTLLLAHGANT
SAVNSKKQAPMDVIGELCYVRHDIAKAIKTKVCVVRRGVYMRHTSMWVLH
TVLVFPSIH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf