Trimin1|171978|e_gw1.88.5.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|171978
Unique NameTrimin1|171978|e_gw1.88.5.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length259
Homology
BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: A0A835YL30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL30_9STRA)

HSP 1 Score: 424 bits (1090), Expect = 1.310e-148
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
Query:    1 MAAHQQHAVLSCEAHIVAMMRKFPDSASVQKWGARASSCSMHDMAHLAAERKLSRAGACEAMIAALVQHSLDASVQEAAISVAISLLCGSASNGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLCAVTSLAPVFTRRDALKFSTTGGARALVAVMNAHVFDGSVQQASAQVLMDLANKDDTNAISMQFVAAGAGAALATAIRLVHRYHQGPLDAVACLACMVRCRGAAGSGRCSRGSAGGCVRQHPLAHCCKHVF 258
            MAAHQQHAVLSCEAHIVAMMRKFPDSASVQKWGARASSCSMHDMAHLAAERKLSRAGACEAMIAALVQHSLDASVQEAAISVAISLLCGSASNGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLCAVTSLAPVFTRRDALKFSTTGGARALVAVMNAHVFDGSVQQASAQVLMDLANKDDTNAISMQFVAAGAGAALATAIRLVHRYHQGPLDAVACLACMVRCRGAAGSGRCSRGSAGGCVRQHPLAHCCKHVF
Sbjct:    1 MAAHQQHAVLSCEAHIVAMMRKFPDSASVQKWGARASSCSMHDMAHLAAERKLSRAGACEAMIAALVQHSLDASVQEAAISVAISLLCGSASNGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLCAVTSLAPVFTRRDALKFSTTGGARALVAVMNAHVFDGSVQQASAQVLMDLANKDDTNAISMQFVAAGAGAALATAIRLVHRYHQGPLDAVACLACMVRCRGAAGSGRCSRGSAGGCVRQHPLAHCCKHVF 258          
BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: A0A836C8J6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8J6_9STRA)

HSP 1 Score: 140 bits (352), Expect = 7.610e-35
Identity = 113/296 (38.18%), Postives = 138/296 (46.62%), Query Frame = 0
Query:    1 MAAHQQHAVLSCEAHIVAMMRKFPDSASVQKWGARASSCSMH------DMAHLAAERKLSRAGAC----------EAMIAALVQHSLDASVQEAAISVAISLLCGSASN----------------------------------------------------------GRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLCAVTSLAPVFTRRDALKFSTTGGARALVAVMNAHVFDGSVQQASAQVLMDLANKDDTNAISMQFVAAGAGAALATAIRLVHRYHQGPLDAVACLA 222
            MAAHQQHAVLSCEA +VAMMR+FP SASVQ+WGA    C+M        MA L     L RAGAC          EA++AAL+ H L+  VQEAA++ A +L+CGS SN                                                                                          +L A+ SL   FTRRDALKF + GGA  LVAVMNAH F G VQQA+A+VL+ LA    T+AI+ +F+AAGA AA+      V ++    LDAVACLA
Sbjct:    1 MAAHQQHAVLSCEAKMVAMMRQFPQSASVQRWGA----CAMVRRVQRLPMARLTIVHNLGRAGACVXXXXXXXXXEAIVAALLAHRLNVRVQEAALAAAGTLVCGSRSNWLKLKAXXXXXXXXXXXXXXXXXXXXXXYAAGVIAEIAEATRSFDVATASRAAHSSEHAATKEALMAAGVNTALVRALQTHCGSHKMVWRILYALISLTSAFTRRDALKFCSAGGANTLVAVMNAHPFHGYVQQAAARVLIQLAGTGGTDAIANKFIAAGASAAVTAVFHNVPQFAS--LDAVACLA 290          
BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: A0A835Z964_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z964_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.450e-12
Identity = 50/96 (52.08%), Postives = 59/96 (61.46%), Query Frame = 0
Query:    1 MAAHQQHAVLSCEAHIVAMMRKFPDSASVQKWGARASSCSMHDMAHLA-AERKLSRAGACEAMIAALVQHSLDASVQEAAISVAISLLCGSASNGR 95
            MAAHQQHA   C  H+V MM+ FP  AS Q+WGARA +  + D      A R+L RAGACEA+ AAL  H   ASVQ AA+  A  L+  SA N R
Sbjct:    1 MAAHQQHAPQRCHVHVVQMMQTFPGCASAQRWGARAIARIIRDDGTQDFAARELGRAGACEAVAAALAAHLAVASVQGAALHAASKLVRESARNWR 96          
BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: A0A835ZA66_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA66_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.750e-12
Identity = 79/244 (32.38%), Postives = 106/244 (43.44%), Query Frame = 0
Query:   19 MMRKFPDSASVQKWGARASSCSMHDMAH---LAAERKLSRAGACEAMIAALVQHSLDASVQEAAISVAISL----------------------------------LCGS----------ASNGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--VLCA----VTSLAPVFTRRDALKFSTTGGARALVAVMNAHVFDGSVQQASAQVLMDLANKD--DTNAISMQFVAAGAGAALATAIRLV 207
            MM+KFPDSA VQ WGARA    +H+        A R+L RAGACEA+ AA   +   ASVQ+AA+  A +L                                  LCG+          AS G                                 ++CA    V SLA  +T  +AL F T GGA+A+VA ++AH FD +V+  S   L  L + D    NA++ QF+AAGA AA+   +R +
Sbjct:    1 MMQKFPDSARVQLWGARAIDRIIHNAGFGGFQIAARELGRAGACEAVAAASDAYRQVASVQQAALEAAGALVYKLACNWQRFNAAGLCPSVVASMREHAFNSDIQLCGACIIEYILDLTASVGEATEHVAAKNSLMSARADSVLLRALQNHRRDPLIVCARLDAVESLAGAWTAAEALAFCTAGGAQAVVAFLDAHSFDRNVRTQSLSALTTLIDGDVCGGNAVTAQFLAAGAIAAVTALLRTI 244          
BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: A0A835YKL3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKL3_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 3.390e-8
Identity = 63/212 (29.72%), Postives = 98/212 (46.23%), Query Frame = 0
Query:    2 AAHQQHAVLSCEAHIVAMMRKFPDSASVQKWGARA-SSCSMHDMAHLAAERKLSRAGACEAMIAALVQHSLDASVQEAAISVAISLLCGSASNGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLCAVTSLAPVFTRRDALKFSTTGGARALVAVMNAHVFDGSVQQASAQVLMDLA--NKDDTNAISMQFVAAGAGAALATAIRLVHRY 210
            A  Q HA ++CE  +  MMR FP+ AS+Q W ARA S+ ++ +    A +R L +AGAC A+++ALV+H  +A+VQ A      +LL    +  R                             +V     + A +  RR A +       +A+VA M   V    +Q A+A  +  +   N +   AI+ Q + AGAG AL  A+ +  R+
Sbjct:    3 AGRQLHATVACEEQVARMMRSFPNDASIQVWAARAISALTVDEPNDSAIQRSLGQAGACAALVSALVKHRPNATVQFATAGATDALLAAVRARLRYSTVPRQALYALGAM--------------AVRPNEPADATLLLRRHAAQV-----VQAIVAAMRIDVTHQDLQAAAATAIERIMEHNNNGGAAIAQQLLDAGAGNALMEALAVSTRH 195          
BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: A0A835YNT0_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNT0_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 6.880e-8
Identity = 72/177 (40.68%), Postives = 93/177 (52.54%), Query Frame = 0
Query:    5 QQHAVLSCEAHIVAMMRKFPDSASVQKWGARASSCSMHDMAH--LAAERKLSRAGACEAMIAALVQHSLDASVQEAAISVAISLLCGSASNGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLCAVTSLAPVFTRRDALKFSTTGGARALVAVMNAHVFDGSVQQASAQVLMDLA 179
            Q H  L CEA +V MMR FP+ A +Q W ARA      D ++      R L +AGAC A++ ALV H  +A+VQ  A+    SL  G  +N           XXXXXXXXXXXXXXXXXXXX     + S A       A++ +T G   ALVA + AH+    V + +   +  LA
Sbjct:    6 QLHPTLMCEAQVVRMMRTFPEDAGIQVWAARAIEKLSADESYGDRTTRRSLGQAGACAALVTALVTHCHNAAVQTTALRAVCSLAKGCPANCGIFQDADIATXXXXXXXXXXXXXXXXXXXXXXXXXLVSAASSAGVNCAVQLATVGATDALVAAVRAHIQHAMVPKQALYAMYTLA 182          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171978 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A835YL30_9STRA1.310e-148100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C8J6_9STRA7.610e-3538.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z964_9STRA1.450e-1252.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZA66_9STRA2.750e-1232.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YKL3_9STRA3.390e-829.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YNT0_9STRA6.880e-840.68Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 3..239
e-value: 1.9E-8
score: 35.3
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 52..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_88contigContig_88:155313..156251 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171978mRNA_11026Tribonema minus UTEX_B_3156 mRNAContig_88 155313..156251 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|171978|e_gw1.88.5.1 ID=Trimin1|171978|e_gw1.88.5.1|Name=jgi.p|Trimin1|171978|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=259bp
MAAHQQHAVLSCEAHIVAMMRKFPDSASVQKWGARASSCSMHDMAHLAAE
RKLSRAGACEAMIAALVQHSLDASVQEAAISVAISLLCGSASNGRKMKAA
GLCHLVVAAMRAHAAHSGVQKTVCSVLCAVTSLAPVFTRRDALKFSTTGG
ARALVAVMNAHVFDGSVQQASAQVLMDLANKDDTNAISMQFVAAGAGAAL
ATAIRLVHRYHQGPLDAVACLACMVRCRGAAGSGRCSRGSAGGCVRQHPL
AHCCKHVF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold