Trimin1|171771|e_gw1.85.92.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|171771
Unique NameTrimin1|171771|e_gw1.85.92.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length168
Homology
BLAST of jgi.p|Trimin1|171771 vs. uniprot
Match: A0A835YK87_9STRA (Homeodomain-like protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK87_9STRA)

HSP 1 Score: 347 bits (889), Expect = 5.840e-121
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
Query:    1 MQCNAAAAGVKLASSRAPAQRWSPEEDGRLTRAVETFDEKNWRRISAVVGTKKAVQCMQRWRRSLRPDLKKGRWTHEEDALLIELITQGRKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFAPEEDWLIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 168
            MQCNAAAAGVKLASSRAPAQRWSPEEDGRLTRAVETFDEKNWRRISAVVGTKKAVQCMQRWRRSLRPDLKKGRWTHEEDALLIELITQGRKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFAPEEDWLIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR
Sbjct:    1 MQCNAAAAGVKLASSRAPAQRWSPEEDGRLTRAVETFDEKNWRRISAVVGTKKAVQCMQRWRRSLRPDLKKGRWTHEEDALLIELITQGRKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFAPEEDWLIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 168          
BLAST of jgi.p|Trimin1|171771 vs. uniprot
Match: A0A835Z4C0_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4C0_9STRA)

HSP 1 Score: 283 bits (723), Expect = 8.200e-96
Identity = 133/156 (85.26%), Postives = 141/156 (90.38%), Query Frame = 0
Query:   13 ASSRAPAQRWSPEEDGRLTRAVETFDEKNWRRISAVVGTKKAVQCMQRWRRSLRPDLKKGRWTHEEDALLIELITQGRKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFAPEEDWLIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 168
            A  RAP +RWSPEED RL R V+ F  +NWRRISAVVGTKKAVQCMQRW+RSLRPDLKKGRWT EEDALLIELITQG KTW ELSNRI GRSAKQCRERWTHHL+PAVNKDVF PEEDW I+STQAA+GNRWSHIAAMLPGRTENAVK+RWKTCHR
Sbjct:    2 APRRAPVERWSPEEDDRLRRGVDMFAARNWRRISAVVGTKKAVQCMQRWKRSLRPDLKKGRWTQEEDALLIELITQGYKTWAELSNRIAGRSAKQCRERWTHHLNPAVNKDVFTPEEDWTIVSTQAAIGNRWSHIAAMLPGRTENAVKIRWKTCHR 157          
BLAST of jgi.p|Trimin1|171771 vs. uniprot
Match: A0A836C964_9STRA (Ternary protein-Dna Complex3 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C964_9STRA)

HSP 1 Score: 239 bits (611), Expect = 3.070e-79
Identity = 115/123 (93.50%), Postives = 118/123 (95.93%), Query Frame = 0
Query:   48 VVGTKKAVQCMQRWRRSLRPDLKKGRWTHEEDALLIELITQGRKTWPELSNRITGRSAKQ--CRERWTHHLDPAVNKDVFAPEEDWLIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 168
            +VGTKKAVQCMQRWRRSLRPDLKKGRWTHEEDALLIELITQGRKTWPELSNRITGRSAKQ  CRERWTHHLDPAV+KD F  EEDWLI+STQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR
Sbjct:    1 LVGTKKAVQCMQRWRRSLRPDLKKGRWTHEEDALLIELITQGRKTWPELSNRITGRSAKQIECRERWTHHLDPAVSKDSFTLEEDWLIVSTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 123          
BLAST of jgi.p|Trimin1|171771 vs. uniprot
Match: A0A835Z2Q0_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Q0_9STRA)

HSP 1 Score: 189 bits (480), Expect = 5.420e-59
Identity = 87/142 (61.27%), Postives = 108/142 (76.06%), Query Frame = 0
Query:   22 WSPEEDGRLTRAVETFDEKNWRRISAVVGTKKAVQCMQRWRRSLRPDLKKGRWTHEEDALLIELITQGRKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFAPEEDWLIISTQAAVGNRWSHIAAMLPGRTENAVKVRW 163
            W+ +ED RL  AV TF  K+W R +A VGTK A QCMQRWRR+L+PD++KGRW  EEDALL++L+T+G  +W E +  I GRSAKQCRERW HHLDPAV++  F P ED ++++ QAA GN W+ IAA LPGRTEN VK RW
Sbjct:    1 WNEDEDERLRCAVATFGGKSWPRAAAAVGTKTATQCMQRWRRALQPDMRKGRWRDEEDALLLDLMTRGHDSWSEFARHIPGRSAKQCRERWRHHLDPAVSRARFTPAEDAVVVAMQAARGNAWARIAARLPGRTENTVKTRW 142          
BLAST of jgi.p|Trimin1|171771 vs. uniprot
Match: D0NJN5_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0NJN5_PHYIT)

HSP 1 Score: 175 bits (443), Expect = 4.700e-52
Identity = 80/156 (51.28%), Postives = 110/156 (70.51%), Query Frame = 0
Query:   10 VKLASSRAPAQRWSPEEDGRLTRAVETFDEKNWRRISAVVGTKKAVQCMQRWRRSLRPDLKKGRWTHEEDALLIELITQGRKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFAPEEDWLIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKT 165
            +     +A  +RW+PEED +L  AV    E+NW+ I+  V  +   QC+QRW + L P L KG W  EED LL EL+ +GRK W +++ RI GR++KQCRERW +HLDP++ +  ++PEED +I+  QA +GNRWS IAAMLPGRTE+AVK+RWK+
Sbjct:   73 IMKTKDKAVPKRWTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKS 228          
BLAST of jgi.p|Trimin1|171771 vs. uniprot
Match: D8LM16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM16_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 6.590e-52
Identity = 86/158 (54.43%), Postives = 113/158 (71.52%), Query Frame = 0
Query:   11 KLASSRAPAQRWSPEEDGRLTRAVETFDEKNWRRISAVVGTKKAVQCMQRWRRSLRPDLKKGRWTHEEDALLIELITQGRKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFAPEEDWLIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 168
            K AS+R   +RW P ED +LT AV+   EK+W+ I+  VG++  VQC+QRW++ LRP L KG+W  EEDA L++L T   K W  LS  ++GR++KQCRERW HHLDP++NK  +  EED +II TQA +GNRWS IAA LPGRTEN++K+R K   R
Sbjct:  100 KKASTRP--RRWQPAEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDNIIIETQAELGNRWSQIAARLPGRTENSIKIRCKALQR 255          
BLAST of jgi.p|Trimin1|171771 vs. uniprot
Match: H3G911_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G911_PHYRM)

HSP 1 Score: 171 bits (432), Expect = 2.290e-51
Identity = 78/150 (52.00%), Postives = 108/150 (72.00%), Query Frame = 0
Query:   16 RAPAQRWSPEEDGRLTRAVETFDEKNWRRISAVVGTKKAVQCMQRWRRSLRPDLKKGRWTHEEDALLIELITQGRKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFAPEEDWLIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKT 165
            +A  +RW+PEED +L  AV    E+NW+ I+  V  +   QC+QRW + L P L KG W  +ED LL EL+ +GRK W +++ RI GR++KQCRERW +HLDP++ +  ++ EED +I+  QA +GNRWS IAAMLPGRTE+AVK+RWK+
Sbjct:    6 KAVPKRWTPEEDEKLREAVNRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSAEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKS 155          
BLAST of jgi.p|Trimin1|171771 vs. uniprot
Match: A0A0W8DM41_PHYNI (Gamma-soluble NSF attachment protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DM41_PHYNI)

HSP 1 Score: 175 bits (444), Expect = 5.350e-50
Identity = 80/156 (51.28%), Postives = 110/156 (70.51%), Query Frame = 0
Query:   10 VKLASSRAPAQRWSPEEDGRLTRAVETFDEKNWRRISAVVGTKKAVQCMQRWRRSLRPDLKKGRWTHEEDALLIELITQGRKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFAPEEDWLIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKT 165
            +     +A  +RW+PEED +L  AV    E+NW+ I+  V  +   QC+QRW + L P L KG W  EED LL EL+ +GRK W +++ RI GR++KQCRERW +HLDP++ +  ++PEED +I+  QA +GNRWS IAAMLPGRTE+AVK+RWK+
Sbjct:  103 IMKTKDKAVPKRWTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKS 258          
BLAST of jgi.p|Trimin1|171771 vs. uniprot
Match: A0A6H5KJU6_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJU6_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 1.140e-49
Identity = 83/149 (55.70%), Postives = 109/149 (73.15%), Query Frame = 0
Query:   20 QRWSPEEDGRLTRAVETFDEKNWRRISAVVGTKKAVQCMQRWRRSLRPDLKKGRWTHEEDALLIELITQGRKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFAPEEDWLIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 168
            +RW PEED +LT AV+   EK+W+ I+  VG++  VQC+QRW++ LRP L KG+W  EEDA L++L T   K W  LS  ++GR++KQCRERW HHLDP++NK  +  EED +II TQA +GNRWS IAA LPGRTEN++K+R K   R
Sbjct:  114 RRWQPEEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDKIIIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQR 262          
BLAST of jgi.p|Trimin1|171771 vs. uniprot
Match: A0A662WMC1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMC1_9STRA)

HSP 1 Score: 166 bits (420), Expect = 6.550e-49
Identity = 78/150 (52.00%), Postives = 106/150 (70.67%), Query Frame = 0
Query:   16 RAPAQRWSPEEDGRLTRAVETFDEKNWRRISAVVGTKKAVQCMQRWRRSLRPDLKKGRWTHEEDALLIELITQGRKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFAPEEDWLIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKT 165
            +A  +RW+  ED  L  AVE+  EKNW+ I+A V  +   QC+QRW + L P L KG W+  ED LL  L+   +K W +++ +I GR++KQCRERW +HLDPA+ +  ++PEED LI+  QA +GNRWS IAAMLPGRTE+AVK+RWK+
Sbjct:    2 KANPRRWTAAEDEALRSAVESHREKNWKAIAAHVAGRNHTQCLQRWTKVLAPGLVKGHWSPHEDELLRRLVAADQKNWGDVAAKIPGRTSKQCRERWHNHLDPAIVRGAYSPEEDRLILEAQARLGNRWSVIAAMLPGRTEDAVKIRWKS 151          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171771 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YK87_9STRA5.840e-121100.00Homeodomain-like protein n=2 Tax=Tribonema minus T... [more]
A0A835Z4C0_9STRA8.200e-9685.26Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A836C964_9STRA3.070e-7993.50Ternary protein-Dna Complex3 (Fragment) n=1 Tax=Tr... [more]
A0A835Z2Q0_9STRA5.420e-5961.27Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
D0NJN5_PHYIT4.700e-5251.28Myb-like DNA-binding protein, putative n=2 Tax=Phy... [more]
D8LM16_ECTSI6.590e-5254.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
H3G911_PHYRM2.290e-5152.00Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A0W8DM41_PHYNI5.350e-5051.28Gamma-soluble NSF attachment protein n=1 Tax=Phyto... [more]
A0A6H5KJU6_9PHAE1.140e-4955.70MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A662WMC1_9STRA6.550e-4952.00Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 70..118
e-value: 1.0E-9
score: 48.3
coord: 18..67
e-value: 2.0E-11
score: 54.0
coord: 121..168
e-value: 0.0031
score: 26.8
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 117..167
score: 7.932677
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 66..116
score: 11.486072
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 14..65
score: 8.745545
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 73..116
e-value: 8.38814E-9
score: 47.185
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 127..165
e-value: 1.16271E-4
score: 36.0142
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 21..65
e-value: 4.41143E-10
score: 50.6518
NoneNo IPR availableGENE3D1.10.10.60coord: 20..69
e-value: 2.6E-15
score: 58.1
NoneNo IPR availableGENE3D1.10.10.60coord: 125..166
e-value: 5.6E-14
score: 53.8
NoneNo IPR availableGENE3D1.10.10.60coord: 70..122
e-value: 1.6E-17
score: 65.2
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 74..130
e-value: 1.4E-11
score: 44.5
NoneNo IPR availablePANTHERPTHR45614:SF152SUBFAMILY NOT NAMEDcoord: 70..165
coord: 17..85
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 70..165
coord: 17..85
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 20..63
e-value: 5.4E-11
score: 42.5
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 20..65
score: 10.512043
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 121..168
score: 14.997329
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 66..120
score: 21.1966
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 68..163
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 21..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_85contigContig_85:321237..323471 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171771mRNA_12191Tribonema minus UTEX_B_3156 mRNAContig_85 321237..323471 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|171771|e_gw1.85.92.1 ID=Trimin1|171771|e_gw1.85.92.1|Name=jgi.p|Trimin1|171771|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=168bp
MQCNAAAAGVKLASSRAPAQRWSPEEDGRLTRAVETFDEKNWRRISAVVG
TKKAVQCMQRWRRSLRPDLKKGRWTHEEDALLIELITQGRKTWPELSNRI
TGRSAKQCRERWTHHLDPAVNKDVFAPEEDWLIISTQAAVGNRWSHIAAM
LPGRTENAVKVRWKTCHR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf