Trimin1|171442|e_gw1.82.97.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|171442
Unique NameTrimin1|171442|e_gw1.82.97.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length174
Homology
BLAST of jgi.p|Trimin1|171442 vs. uniprot
Match: A0A835YKK6_9STRA (Multidrug resistance protein 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKK6_9STRA)

HSP 1 Score: 339 bits (870), Expect = 7.040e-118
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
Query:    1 VQQLNVHWLRSQIGYVGQEPVLFSTSIFENIARGKEGPTLEEVQAAARAANVHEFIEELTDKYETNVGSKSCLLSGGQKQRIAIAGAIIKDPAIMLLDEATSALDSERQAQVQAALDRLRMLSKRTTLIICAPSKRGTHLAVPQDGCICERGSHAHQRQQLCVHHAARSSNGL 173
            VQQLNVHWLRSQIGYVGQEPVLFSTSIFENIARGKEGPTLEEVQAAARAANVHEFIEELTDKYETNVGSKSCLLSGGQKQRIAIAGAIIKDPAIMLLDEATSALDSERQAQVQAALDRLRMLSKRTTLIICAPSKRGTHLAVPQDGCICERGSHAHQRQQLCVHHAARSSNGL
Sbjct:    1 VQQLNVHWLRSQIGYVGQEPVLFSTSIFENIARGKEGPTLEEVQAAARAANVHEFIEELTDKYETNVGSKSCLLSGGQKQRIAIAGAIIKDPAIMLLDEATSALDSERQAQVQAALDRLRMLSKRTTLIICAPSKRGTHLAVPQDGCICERGSHAHQRQQLCVHHAARSSNGL 173          
BLAST of jgi.p|Trimin1|171442 vs. uniprot
Match: A0A836CKJ0_9STRA (p-glycoprotein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKJ0_9STRA)

HSP 1 Score: 265 bits (677), Expect = 9.700e-87
Identity = 140/156 (89.74%), Postives = 144/156 (92.31%), Query Frame = 0
Query:    3 QLNVHWLRSQIGYVGQEPVLFSTSIFENIARGKEGPTLEEVQAAARAANVHEFIEELTDKYETNVGSKSCLLSGGQKQRIAIAGAIIKDPAIMLLDEATSALDSERQAQVQAALDRLRMLSKRTTLIIC---APSKRGTHLAVPQDGCICERGSHA 155
            +LNVHWLRSQIGYVGQEPVLFSTSIFENIARGKEGPTLEEVQA ARAANVHEFIE LTDKYETNVGSKSCLLSGGQKQRIAIAGAIIKDPAIMLLDEATSALDSERQAQVQAALDRLRMLSKRTTLII    +  +    +AVPQDGCICERGSHA
Sbjct:  108 KLNVHWLRSQIGYVGQEPVLFSTSIFENIARGKEGPTLEEVQATARAANVHEFIEGLTDKYETNVGSKSCLLSGGQKQRIAIAGAIIKDPAIMLLDEATSALDSERQAQVQAALDRLRMLSKRTTLIIAHRLSTVRNADSIAVPQDGCICERGSHA 263          
BLAST of jgi.p|Trimin1|171442 vs. uniprot
Match: A0A836CNL1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNL1_9STRA)

HSP 1 Score: 189 bits (479), Expect = 2.710e-52
Identity = 98/157 (62.42%), Postives = 122/157 (77.71%), Query Frame = 0
Query:    1 VQQLNVHWLRSQIGYVGQEPVLFSTSIFENIARGKEGPTLEEVQAAARAANVHEFIEELTDKYETNVGSKSCLLSGGQKQRIAIAGAIIKDPAIMLLDEATSALDSERQAQVQAALDRLRMLSKRTTLIIC---APSKRGTHLAVPQDGCICERGSH 154
            V++LNVHWLRSQ+GYVGQEPVLF+ SI +NIARG    T EE+++AARAAN H+F+    + Y+T+VG KS LLSGGQKQRIAIA AI+K+PAI+LLDEATSALD+E + QVQAALDRLR L KRTTL++    +  +    +AV   GC+ E GSH
Sbjct: 1365 VKELNVHWLRSQVGYVGQEPVLFTGSIRDNIARGHPSATAEEIESAARAANAHDFVTAFAEGYDTDVGEKSALLSGGQKQRIAIARAILKNPAILLLDEATSALDNESERQVQAALDRLRALQKRTTLVVAHRLSTIRNADKIAVVTGGCVRELGSH 1521          
BLAST of jgi.p|Trimin1|171442 vs. uniprot
Match: A0A836CGZ9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGZ9_9STRA)

HSP 1 Score: 177 bits (450), Expect = 2.110e-48
Identity = 95/157 (60.51%), Postives = 117/157 (74.52%), Query Frame = 0
Query:    1 VQQLNVHWLRSQIGYVGQEPVLFSTSIFENIARGKEGPTLEEVQAAARAANVHEFIEELTDKYETNVGSKSCLLSGGQKQRIAIAGAIIKDPAIMLLDEATSALDSERQAQVQAALDRLRMLSKRTTLIIC---APSKRGTHLAVPQDGCICERGSH 154
            VQ+LNVHWLRS IGYVGQEPVLF+ +I ENI +G    T+EEV+ AARAAN H+FI   TD YET+VG KS LLSGGQKQRIAIA AI+++P I+LLDEATSALD+E + QVQAALD L+ L +RTTL++       +    +AV   G + E G+H
Sbjct: 1041 VQELNVHWLRSNIGYVGQEPVLFTGTIKENITKGNPDATMEEVENAARAANAHDFIMSFTDGYETDVGEKSALLSGGQKQRIAIARAILRNPNILLLDEATSALDNESERQVQAALDHLQSLQRRTTLVVAHRLTTIRNADKIAVLGTGAVRELGTH 1197          
BLAST of jgi.p|Trimin1|171442 vs. uniprot
Match: A0A835Z4J1_9STRA (ATP-binding cassette, sub-family B, member 1A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J1_9STRA)

HSP 1 Score: 176 bits (447), Expect = 5.410e-48
Identity = 92/157 (58.60%), Postives = 118/157 (75.16%), Query Frame = 0
Query:    1 VQQLNVHWLRSQIGYVGQEPVLFSTSIFENIARGKEGPTLEEVQAAARAANVHEFIEELTDKYETNVGSKSCLLSGGQKQRIAIAGAIIKDPAIMLLDEATSALDSERQAQVQAALDRLRMLSKRTTLIIC---APSKRGTHLAVPQDGCICERGSH 154
            V++LN+HWLRS +GYVGQEPVLF+ +I +NI +G    T+EEV+ A RAAN H+FI   TD YET+VG KS LLSGGQKQRIAIA AI+++P I+LLDEATSALD+E + QVQAALDRL+ L +RTTL++       +    +AV   GC+ E G+H
Sbjct: 1185 VRELNIHWLRSNMGYVGQEPVLFTGTIRDNITKGNPDATVEEVENATRAANAHDFIMSFTDGYETDVGEKSALLSGGQKQRIAIARAILRNPNIVLLDEATSALDNESERQVQAALDRLQSLQRRTTLVVAHRLTTIRNADKIAVLGGGCVRELGTH 1341          
BLAST of jgi.p|Trimin1|171442 vs. uniprot
Match: A0A836CDG9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG9_9STRA)

HSP 1 Score: 176 bits (446), Expect = 7.290e-48
Identity = 94/157 (59.87%), Postives = 115/157 (73.25%), Query Frame = 0
Query:    1 VQQLNVHWLRSQIGYVGQEPVLFSTSIFENIARGKEGPTLEEVQAAARAANVHEFIEELTDKYETNVGSKSCLLSGGQKQRIAIAGAIIKDPAIMLLDEATSALDSERQAQVQAALDRLRMLSKRTTLIIC---APSKRGTHLAVPQDGCICERGSH 154
            VQ+LNVHWLRS IGYVGQEPVLF+ +I ENI RG    + EEV+ AA+AAN HEFI+     Y+TNVG KS LLSGGQKQRIAIA AI+++PAI+LLDEATSALD+E + QVQ ALD L+ L +RTTL++            +AV   G +CE G+H
Sbjct: 1048 VQELNVHWLRSNIGYVGQEPVLFTGTIRENITRGNPDASTEEVERAAKAANAHEFIKSFEHGYDTNVGEKSALLSGGQKQRIAIARAILRNPAILLLDEATSALDNESERQVQMALDHLQSLQRRTTLVVAHRLTTVHNADKIAVLGGGKVCELGTH 1204          
BLAST of jgi.p|Trimin1|171442 vs. uniprot
Match: A0A835ZHI0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHI0_9STRA)

HSP 1 Score: 173 bits (439), Expect = 3.430e-47
Identity = 88/130 (67.69%), Postives = 108/130 (83.08%), Query Frame = 0
Query:    1 VQQLNVHWLRSQIGYVGQEPVLFSTSIFENIARGKEGPTLEEVQAAARAANVHEFIEELTDKYETNVGSKSCLLSGGQKQRIAIAGAIIKDPAIMLLDEATSALDSERQAQVQAALDRLRMLSKRTTLII 130
            V++LNVHWLRSQ+GYVGQEPVLF+ SI +NIARG    T EE+++AARAAN H+F+    + Y+T+VG KS LLSGGQKQRIAIA AI+K+PAI+LLDEATSALD+E + QVQAALD LR L K TTL++
Sbjct:  632 VKELNVHWLRSQVGYVGQEPVLFTGSIRDNIARGHPSATAEEIESAARAANAHDFVTAFAEGYDTDVGEKSALLSGGQKQRIAIARAILKNPAILLLDEATSALDNESERQVQAALDCLRALQKCTTLVV 761          
BLAST of jgi.p|Trimin1|171442 vs. uniprot
Match: A0A7S3TDI4_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TDI4_EMIHU)

HSP 1 Score: 154 bits (389), Expect = 2.130e-44
Identity = 86/159 (54.09%), Postives = 113/159 (71.07%), Query Frame = 0
Query:    1 VQQLNVHWLRSQIGYVGQEPVLFSTSIFENIARGKEGPTLEEVQAAARAANVHEFI-EELTDKYETNVGSKSCLLSGGQKQRIAIAGAIIKDPAIMLLDEATSALDSERQAQVQAALDRLRMLSKRTTLIIC---APSKRGTHLAVPQDGCICERGSHA 155
            ++ LN+ WLRSQ+G VGQEPVLF  ++ ENIA GKEG + EEV+ AAR AN H FI   L   Y TNVG +  +LSGGQKQRIAIA A+++ PAI+LLDEATSALD+E +  VQAALD +   ++RTTL+I    +  +    +AV  +G + E+G+HA
Sbjct:   20 IRTLNLRWLRSQLGLVGQEPVLFEGTVGENIAYGKEGASREEVEEAARNANAHGFIMSNLPHGYNTNVGIRGGMLSGGQKQRIAIARAVVRKPAILLLDEATSALDNESERVVQAALDAVVAETRRTTLVIAHRLSTIRNADSIAVLSEGRVVEKGTHA 178          
BLAST of jgi.p|Trimin1|171442 vs. uniprot
Match: A0A6T8A681_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T8A681_9EUKA)

HSP 1 Score: 154 bits (388), Expect = 4.700e-44
Identity = 88/161 (54.66%), Postives = 111/161 (68.94%), Query Frame = 0
Query:    1 VQQLNVHWLRSQIGYVGQEPVLFSTSIFENIARGKEG--PTLEEVQAAARAANVHEFI-EELTDKYETNVGSKSCLLSGGQKQRIAIAGAIIKDPAIMLLDEATSALDSERQAQVQAALDRLRMLSKRTTLIIC---APSKRGTHLAVPQDGCICERGSHA 155
            +++LNV WLRSQ+G+VGQEPVLFS S+ ENI  GK G   T +E++ AAR AN H FI E L D+YET VG     LSGGQKQR+AIA A+IK P ++LLDEATSALD+E +  VQAALD L    +RTT++I    +  +    +AV  DG + E G HA
Sbjct:   26 LRELNVRWLRSQLGFVGQEPVLFSGSVAENIGYGKAGGEATRDEIEEAARMANAHGFITESLADQYETQVGLGGGQLSGGQKQRVAIARALIKKPIVLLLDEATSALDNESERIVQAALDELMAKQRRTTIVIAHRLSTIRDADKIAVVSDGRVVEEGPHA 186          
BLAST of jgi.p|Trimin1|171442 vs. uniprot
Match: UPI001C719E4B (ABC transporter B family member 4-like n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C719E4B)

HSP 1 Score: 151 bits (382), Expect = 1.870e-43
Identity = 89/157 (56.69%), Postives = 109/157 (69.43%), Query Frame = 0
Query:    1 VQQLNVHWLRSQIGYVGQEPVLFSTSIFENIARGKEGPTLEEVQAAARAANVHEFIEELTDKYETNVGSKSCLLSGGQKQRIAIAGAIIKDPAIMLLDEATSALDSERQAQVQAALDRLRMLSKRTTLIIC---APSKRGTHLAVPQDGCICERGSH 154
            V+ LNV WLR+ IG VGQEPVLFST+I ENI  GK   T EE++ AA+ AN H FI+ L  KY T VG +   LSGGQKQRIAIA A+IK+P I+LLDEATSALD+E +A VQAALD+ R    RTT++I    +  +    +AV  DG I E G+H
Sbjct:    6 VKDLNVGWLRNHIGLVGQEPVLFSTTILENIKYGKLDATQEEIETAAKIANAHNFIDALPLKYNTLVGERGTQLSGGQKQRIAIARAMIKNPKILLLDEATSALDTESEAIVQAALDQAR--KGRTTIVIAHRLSTIRTADKIAVLADGRIKETGTH 160          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171442 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YKK6_9STRA7.040e-118100.00Multidrug resistance protein 4 n=1 Tax=Tribonema m... [more]
A0A836CKJ0_9STRA9.700e-8789.74p-glycoprotein n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A836CNL1_9STRA2.710e-5262.42P-loop containing nucleoside triphosphate hydrolas... [more]
A0A836CGZ9_9STRA2.110e-4860.51ATP-binding cassette, sub-family B, member 1A n=1 ... [more]
A0A835Z4J1_9STRA5.410e-4858.60ATP-binding cassette, sub-family B, member 1A n=2 ... [more]
A0A836CDG9_9STRA7.290e-4859.87ATP-binding cassette, sub-family B, member 1A n=1 ... [more]
A0A835ZHI0_9STRA3.430e-4767.69P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3TDI4_EMIHU2.130e-4454.09Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A6T8A681_9EUKA4.700e-4454.66Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
UPI001C719E4B1.870e-4356.69ABC transporter B family member 4-like n=1 Tax=Par... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003439ABC transporter-like, ATP-binding domainPFAMPF00005ABC_trancoord: 5..102
e-value: 4.9E-16
score: 59.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..155
e-value: 1.9E-61
score: 210.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..156
NoneNo IPR availablePANTHERPTHR24222ABC TRANSPORTER B FAMILYcoord: 2..160
IPR017871ABC transporter-like, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 74..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_82contigContig_82:124096..125574 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171442mRNA_10940Tribonema minus UTEX_B_3156 mRNAContig_82 124096..125574 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|171442|e_gw1.82.97.1 ID=Trimin1|171442|e_gw1.82.97.1|Name=jgi.p|Trimin1|171442|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=174bp
VQQLNVHWLRSQIGYVGQEPVLFSTSIFENIARGKEGPTLEEVQAAARAA
NVHEFIEELTDKYETNVGSKSCLLSGGQKQRIAIAGAIIKDPAIMLLDEA
TSALDSERQAQVQAALDRLRMLSKRTTLIICAPSKRGTHLAVPQDGCICE
RGSHAHQRQQLCVHHAARSSNGL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like_ATP-bd
IPR027417P-loop_NTPase
IPR017871ABC_transporter-like_CS