Trimin1|170990|e_gw1.77.70.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|170990
Unique NameTrimin1|170990|e_gw1.77.70.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length113
Homology
BLAST of jgi.p|Trimin1|170990 vs. uniprot
Match: A0A836C954_9STRA (SecY/SEC61-alpha family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C954_9STRA)

HSP 1 Score: 211 bits (538), Expect = 3.160e-69
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
Query:    1 LIFFFTYFYSTIVLDPKDVAERFRKNSVVILGISPGNPTKSYLRQTLKRIARINAIFLICNIVGLQVLESILHLNVTSLRGLGFTSQLILVNVLIDTVKRIKSFLNEEENTL 112
            LIFFFTYFYSTIVLDPKDVAERFRKNSVVILGISPGNPTKSYLRQTLKRIARINAIFLICNIVGLQVLESILHLNVTSLRGLGFTSQLILVNVLIDTVKRIKSFLNEEENTL
Sbjct:    1 LIFFFTYFYSTIVLDPKDVAERFRKNSVVILGISPGNPTKSYLRQTLKRIARINAIFLICNIVGLQVLESILHLNVTSLRGLGFTSQLILVNVLIDTVKRIKSFLNEEENTL 112          
BLAST of jgi.p|Trimin1|170990 vs. uniprot
Match: SECY_VAULI (Protein translocase subunit SecY n=1 Tax=Vaucheria litorea TaxID=109269 RepID=SECY_VAULI)

HSP 1 Score: 176 bits (447), Expect = 1.940e-51
Identity = 91/110 (82.73%), Postives = 104/110 (94.55%), Query Frame = 0
Query:    1 LIFFFTYFYSTIVLDPKDVAERFRKNSVVILGISPGNPTKSYLRQTLKRIARINAIFLICNIVGLQVLESILHLNVTSLRGLGFTSQLILVNVLIDTVKRIKSFLNEEEN 110
            LIFFFTYFYSTIVLDPKDVAERFRKNSVVILGISPG+ T+SYL + L+ IA+INAIFLI NI+GLQ+LESIL+LN+ ++RGLGFTSQLILVNVLIDT+KRI+SFLNEEEN
Sbjct:  325 LIFFFTYFYSTIVLDPKDVAERFRKNSVVILGISPGSSTRSYLSKILRFIAKINAIFLIYNIIGLQILESILNLNIINIRGLGFTSQLILVNVLIDTIKRIRSFLNEEEN 434          
BLAST of jgi.p|Trimin1|170990 vs. uniprot
Match: A0A8F0F797_9PHAE (Preprotein translocase subunit secY n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F797_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 4.380e-32
Identity = 67/109 (61.47%), Postives = 85/109 (77.98%), Query Frame = 0
Query:    1 LIFFFTYFYSTIVLDPKDVAERFRKNSVVILGISPGNPTKSYLRQTLKRIARINAIFLICNIVGLQVLESILHLNVTSLRGLGFTSQLILVNVLIDTVKRIKSFLNEEE 109
            L+FFFT FYS I+LDPKD+AE+FRKNSV I GI+PG  T+ YL QTLK++A +N+ FL+  I+ L  +E +L +N  +LRG G TSQLILVNVLIDT K+I+S LN EE
Sbjct:  321 LVFFFTSFYSNILLDPKDIAEQFRKNSVSIRGINPGISTQKYLNQTLKKLAFLNSAFLLIVILLLNAVEYLLPVNNLNLRGFGLTSQLILVNVLIDTFKKIQSLLNAEE 429          
BLAST of jgi.p|Trimin1|170990 vs. uniprot
Match: A0A7S6U9Y3_9STRA (Protein translocase subunit SecY n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9Y3_9STRA)

HSP 1 Score: 125 bits (314), Expect = 6.610e-32
Identity = 65/112 (58.04%), Postives = 86/112 (76.79%), Query Frame = 0
Query:    1 LIFFFTYFYSTIVLDPKDVAERFRKNSVVILGISPGNPTKSYLRQTLKRIARINAIFLICNIVGLQVLESILHLNVTSLRGLGFTSQLILVNVLIDTVKRIKSFLNEEENTL 112
            L+FFFT FYS IVLDPKD+A+ FRKNSV I GI  G  T+ YL +TLK + +INAIFLI  ++ L  L+ +L + V+ L+G GFTSQLILVN++IDT+++I S+L+ EEN L
Sbjct:  321 LVFFFTSFYSKIVLDPKDIAKNFRKNSVTIQGIPAGLETEKYLSRTLKHLTQINAIFLISTLLLLNGLDYLLPIKVSQLKGFGFTSQLILVNIIIDTIRKIFSYLSAEENLL 432          
BLAST of jgi.p|Trimin1|170990 vs. uniprot
Match: D1GJR5_FUCVE (Protein translocase subunit SecY n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJR5_FUCVE)

HSP 1 Score: 124 bits (310), Expect = 2.310e-31
Identity = 64/107 (59.81%), Postives = 83/107 (77.57%), Query Frame = 0
Query:    2 IFFFTYFYSTIVLDPKDVAERFRKNSVVILGISPGNPTKSYLRQTLKRIARINAIFLICNIVGLQVLESILHLNVTSLRGLGFTSQLILVNVLIDTVKRIKSFLNEE 108
            +FFFT FYSTI+LDPKD+ E+FRKNSV I GI+PG  T++YL  T+KR+  INAIFLI  ++ L  LE +L LN  +LRG G TSQLILVNVL+DT +++++ LN E
Sbjct:  322 VFFFTSFYSTILLDPKDITEQFRKNSVTIKGITPGITTQNYLSTTIKRLTMINAIFLIIVLILLNGLEYLLPLNKLNLRGFGLTSQLILVNVLVDTFRKVQNLLNTE 428          
BLAST of jgi.p|Trimin1|170990 vs. uniprot
Match: D1J735_ECTSI (Protein translocase subunit SecY n=7 Tax=Ectocarpales TaxID=2877 RepID=D1J735_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 3.270e-31
Identity = 62/108 (57.41%), Postives = 84/108 (77.78%), Query Frame = 0
Query:    1 LIFFFTYFYSTIVLDPKDVAERFRKNSVVILGISPGNPTKSYLRQTLKRIARINAIFLICNIVGLQVLESILHLNVTSLRGLGFTSQLILVNVLIDTVKRIKSFLNEE 108
            L+FFFT FYSTI+LDPKD+ E+FRKNSV I GI+PG PTK+YL  T+KR+  +NA+FL+  ++ L  LE +L +   +LRG G TSQLILVNVL+DT +++++ LN E
Sbjct:  322 LVFFFTSFYSTILLDPKDMTEQFRKNSVTIKGINPGKPTKNYLSITIKRLTILNAVFLVVVLILLNGLEYLLPVGDLNLRGFGLTSQLILVNVLVDTFRKVQNLLNAE 429          
BLAST of jgi.p|Trimin1|170990 vs. uniprot
Match: A0A8F0JZP1_9PHAE (Preprotein translocase subunit secY n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZP1_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 8.750e-31
Identity = 63/109 (57.80%), Postives = 85/109 (77.98%), Query Frame = 0
Query:    1 LIFFFTYFYSTIVLDPKDVAERFRKNSVVILGISPGNPTKSYLRQTLKRIARINAIFLICNIVGLQVLESILHLNVTSLRGLGFTSQLILVNVLIDTVKRIKSFLNEEE 109
            L++FFT FYS I+LDPKD++E+FRKNSV I  I+PG PT++YL +T+KR+  INA FLI  ++ L  LE +L +N  +LRG G TSQLILVNVL+DT ++++S LN EE
Sbjct:  321 LVYFFTSFYSKILLDPKDISEQFRKNSVTIKEINPGMPTRNYLSKTIKRLTLINAGFLIVVLILLNGLEYLLPINNLNLRGFGLTSQLILVNVLVDTFRKVQSLLNAEE 429          
BLAST of jgi.p|Trimin1|170990 vs. uniprot
Match: A0A0R6LUW4_UNDPI (Protein translocase subunit SecY n=28 Tax=Laminariales TaxID=2886 RepID=A0A0R6LUW4_UNDPI)

HSP 1 Score: 120 bits (302), Expect = 3.300e-30
Identity = 62/108 (57.41%), Postives = 83/108 (76.85%), Query Frame = 0
Query:    1 LIFFFTYFYSTIVLDPKDVAERFRKNSVVILGISPGNPTKSYLRQTLKRIARINAIFLICNIVGLQVLESILHLNVTSLRGLGFTSQLILVNVLIDTVKRIKSFLNEE 108
            L+FFFT FYSTI+LDPKD+ E+FRKNSV I GI+PG  T+ YL  T+KR+  +NA+FLI  ++ L  LE +L +N  +LRG G TSQLILVNVL+DT +++++ LN E
Sbjct:  321 LVFFFTSFYSTILLDPKDMTEQFRKNSVTIKGITPGKSTQKYLSITIKRLTILNAVFLIGVLILLNGLEYLLPVNNLNLRGFGLTSQLILVNVLVDTFRKVRNLLNAE 428          
BLAST of jgi.p|Trimin1|170990 vs. uniprot
Match: A0A8E5XRJ3_9PHAE (Protein translocase subunit SecY n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRJ3_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 4.430e-30
Identity = 61/109 (55.96%), Postives = 87/109 (79.82%), Query Frame = 0
Query:    1 LIFFFTYFYSTIVLDPKDVAERFRKNSVVILGISPGNPTKSYLRQTLKRIARINAIFLICNIVGLQVLESILHLNVTSLRGLGFTSQLILVNVLIDTVKRIKSFLNEEE 109
            L+FFFT FYS ++LDPKD+AE+FRK+SV I G++PG  T++YL  T++R+  +NAIFL+  I+ L  LES+L +N  +LRG GFTSQLILVNV+IDT +++++ LN E+
Sbjct:  319 LVFFFTSFYSKVILDPKDIAEQFRKSSVAIKGVAPGISTQNYLSLTIRRLTLLNAIFLVTIIILLNGLESLLPVN--NLRGFGFTSQLILVNVIIDTFRQVQNLLNAED 425          
BLAST of jgi.p|Trimin1|170990 vs. uniprot
Match: A0A141BSM4_9PHAE (Protein translocase subunit SecY n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSM4_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 4.550e-30
Identity = 62/108 (57.41%), Postives = 83/108 (76.85%), Query Frame = 0
Query:    2 IFFFTYFYSTIVLDPKDVAERFRKNSVVILGISPGNPTKSYLRQTLKRIARINAIFLICNIVGLQVLESILHLNVTSLRGLGFTSQLILVNVLIDTVKRIKSFLNEEE 109
            +FFFT FYS ++LDPKD+ E+FRKNSV I GI+PG  T+SYL  T+KR+  INAIFLI  ++ L  LE +L +N  +LRG G TSQLILVNVL+DT +++++ LN E+
Sbjct:  321 VFFFTSFYSAVLLDPKDITEQFRKNSVTIKGITPGINTQSYLSLTIKRLTIINAIFLIIILLLLNGLEYLLPINNLNLRGFGLTSQLILVNVLVDTFRKVQNLLNRED 428          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|170990 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C954_9STRA3.160e-69100.00SecY/SEC61-alpha family n=1 Tax=Tribonema minus Ta... [more]
SECY_VAULI1.940e-5182.73Protein translocase subunit SecY n=1 Tax=Vaucheria... [more]
A0A8F0F797_9PHAE4.380e-3261.47Preprotein translocase subunit secY n=1 Tax=Protoh... [more]
A0A7S6U9Y3_9STRA6.610e-3258.04Protein translocase subunit SecY n=1 Tax=Schizocla... [more]
D1GJR5_FUCVE2.310e-3159.81Protein translocase subunit SecY n=3 Tax=Fucaceae ... [more]
D1J735_ECTSI3.270e-3157.41Protein translocase subunit SecY n=7 Tax=Ectocarpa... [more]
A0A8F0JZP1_9PHAE8.750e-3157.80Preprotein translocase subunit secY n=1 Tax=Desmar... [more]
A0A0R6LUW4_UNDPI3.300e-3057.41Protein translocase subunit SecY n=28 Tax=Laminari... [more]
A0A8E5XRJ3_9PHAE4.430e-3055.96Protein translocase subunit SecY n=1 Tax=Ishige ok... [more]
A0A141BSM4_9PHAE4.550e-3057.41Protein translocase subunit SecY n=14 Tax=Sargassa... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023201SecY domain superfamilyGENE3D1.10.3370.10SecY subunit domaincoord: 1..109
e-value: 1.1E-24
score: 89.1
IPR023201SecY domain superfamilySUPERFAMILY103491Preprotein translocase SecY subunitcoord: 1..105
IPR002208SecY/SEC61-alpha familyPFAMPF00344SecYcoord: 1..98
e-value: 1.7E-19
score: 70.3
IPR002208SecY/SEC61-alpha familyPANTHERPTHR10906SECY/SEC61-ALPHA FAMILY MEMBERcoord: 1..105
NoneNo IPR availablePANTHERPTHR10906:SF2PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTICcoord: 1..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_77contigContig_77:199816..200154 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|170990mRNA_12457Tribonema minus UTEX_B_3156 mRNAContig_77 199816..200154 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|170990|e_gw1.77.70.1 ID=Trimin1|170990|e_gw1.77.70.1|Name=jgi.p|Trimin1|170990|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=113bp
LIFFFTYFYSTIVLDPKDVAERFRKNSVVILGISPGNPTKSYLRQTLKRI
ARINAIFLICNIVGLQVLESILHLNVTSLRGLGFTSQLILVNVLIDTVKR
IKSFLNEEENTL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023201SecY_dom_sf
IPR002208SecY/SEC61-alpha