Trimin1|170337|e_gw1.71.52.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|170337
Unique Name	Trimin1\|170337\|e_gw1.71.52.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	102

Homology

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BLAST of jgi.p|Trimin1|170337 vs. uniprot
Match: A0A835YM49_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM49_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.850e-65
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0

Query:    1 QVCALQWSRTEKELLSSHGYIDNSLCLWKYPSMVKVKELKGHTKRVLHMAQSPDGQTVVSGAADETLRFWNVFAPAASKARKSASGGSSSSLGSGRAIGIR 101
            QVCALQWSRTEKELLSSHGYIDNSLCLWKYPSMVKVKELKGHTKRVLHMAQSPDGQTVVSGAADETLRFWNVFAPAASKARKSASGGSSSSLGSGRAIGIR
Sbjct:    1 QVCALQWSRTEKELLSSHGYIDNSLCLWKYPSMVKVKELKGHTKRVLHMAQSPDGQTVVSGAADETLRFWNVFAPAASKARKSASGGSSSSLGSGRAIGIR 101

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BLAST of jgi.p|Trimin1|170337 vs. uniprot
Match: A0A225V3I2_9STRA (Cell division cycle protein 20 (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V3I2_9STRA)

HSP 1 Score: 136 bits (342), Expect = 7.630e-37
Identity = 71/96 (73.96%), Postives = 75/96 (78.12%), Query Frame = 0

Query:    1 QVCALQWSRTEKELLSSHGYIDNSLCLWKYPSMVKVKELKGHTKRVLHMAQSPDGQTVVSGAADETLRFWNVFAP--AASKARKSASGGSSSSLGS 94
            QVC+L WS TEKELLSSHGY  N LCLWKYPSM KVKEL GHT RVLH+A SPDG+TVVSGAADETLRFW VF P   A KA  S +  SSSSL S
Sbjct:  248 QVCSLLWSTTEKELLSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAGSPDGETVVSGAADETLRFWKVFGPNRKARKAGSSTAELSSSSLSS 343

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BLAST of jgi.p|Trimin1|170337 vs. uniprot
Match: A0A7S2KKP2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KKP2_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.270e-36
Identity = 59/75 (78.67%), Postives = 63/75 (84.00%), Query Frame = 0

Query:    1 QVCALQWSRTEKELLSSHGYIDNSLCLWKYPSMVKVKELKGHTKRVLHMAQSPDGQTVVSGAADETLRFWNVFAP 75
            QVC LQW+  EKE+LSSHG+  N LCLWKYP+M KVKEL GHT RVLHMA SPDG TVVS AADETLRFWNVFAP
Sbjct:   56 QVCGLQWNPFEKEILSSHGFARNQLCLWKYPTMAKVKELDGHTARVLHMACSPDGSTVVSAAADETLRFWNVFAP 130

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BLAST of jgi.p|Trimin1|170337 vs. uniprot
Match: H3GL68_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GL68_PHYRM)

HSP 1 Score: 138 bits (347), Expect = 2.490e-36
Identity = 72/96 (75.00%), Postives = 76/96 (79.17%), Query Frame = 0

Query:    1 QVCALQWSRTEKELLSSHGYIDNSLCLWKYPSMVKVKELKGHTKRVLHMAQSPDGQTVVSGAADETLRFWNVFAP--AASKARKSASGGSSSSLGS 94
            QVC+L WS TEKELLSSHGY  N LCLWKYPSM KVKEL GHT RVLH+A SPDG+TVVSGAADETLRFW VF P   A KA  SA+  SSSSL S
Sbjct:  437 QVCSLLWSATEKELLSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGETVVSGAADETLRFWKVFGPNRKARKAGSSAAELSSSSLSS 532

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BLAST of jgi.p|Trimin1|170337 vs. uniprot
Match: A0A0N7L6D5_PLAHL (Cell division cycle protein 20 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L6D5_PLAHL)

HSP 1 Score: 137 bits (344), Expect = 6.460e-36
Identity = 71/96 (73.96%), Postives = 75/96 (78.12%), Query Frame = 0

Query:    1 QVCALQWSRTEKELLSSHGYIDNSLCLWKYPSMVKVKELKGHTKRVLHMAQSPDGQTVVSGAADETLRFWNVFAP--AASKARKSASGGSSSSLGS 94
            QVC+L WS TEKELLSSHGY  N LCLWKYPSM KVKEL GHT RVLH+A SPDG+TVVSGAADETLRFW VF P   A KA  S +  SSSSL S
Sbjct:  434 QVCSLLWSNTEKELLSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGETVVSGAADETLRFWKVFGPNRKARKAGSSTTELSSSSLSS 529

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BLAST of jgi.p|Trimin1|170337 vs. uniprot
Match: A0A484EGT9_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGT9_BRELC)

HSP 1 Score: 137 bits (344), Expect = 6.660e-36
Identity = 71/96 (73.96%), Postives = 75/96 (78.12%), Query Frame = 0

Query:    1 QVCALQWSRTEKELLSSHGYIDNSLCLWKYPSMVKVKELKGHTKRVLHMAQSPDGQTVVSGAADETLRFWNVFAP--AASKARKSASGGSSSSLGS 94
            QVC+L WS TEKELLSSHGY  N LCLWKYPSM KVKEL GHT RVLH+A SPDG+TVVSGAADETLRFW VF P   A KA  S +  SSSSL S
Sbjct:  437 QVCSLLWSSTEKELLSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGETVVSGAADETLRFWRVFGPNRKARKAGSSTTDLSSSSLSS 532

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BLAST of jgi.p|Trimin1|170337 vs. uniprot
Match: A0A5D6XRA5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRA5_9STRA)

HSP 1 Score: 135 bits (340), Expect = 7.800e-36
Identity = 70/94 (74.47%), Postives = 73/94 (77.66%), Query Frame = 0

Query:    1 QVCALQWSRTEKELLSSHGYIDNSLCLWKYPSMVKVKELKGHTKRVLHMAQSPDGQTVVSGAADETLRFWNVFAP--AASKARKSASGGSSSSL 92
            QVCAL WS TEKE+LSSHGY  N LCLWKYPSM KVKEL GHT RVLH+A SPDG TVVSGAADETLRFW VF P   ASKA  S +  SSS L
Sbjct:  342 QVCALLWSTTEKEILSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVFGPNRKASKAGSSGAELSSSRL 435

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BLAST of jgi.p|Trimin1|170337 vs. uniprot
Match: A0A6H5KU25_9PHAE (ANAPC4_WD40 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KU25_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 9.250e-36
Identity = 65/93 (69.89%), Postives = 73/93 (78.49%), Query Frame = 0

Query:    1 QVCALQWSRTEKELLSSHGYIDNSLCLWKYPSMVKVKELKGHTKRVLHMAQSPDGQTVVSGAADETLRFWNVFAPAASKARKSASGGSSSSLG 93
            QV +L WS TEKELLSSHGY +N LCLWKYPSMVK KEL GHT RVLHMA SPDG+TVVSGA DETLRFW+VFAP +  +    +GG  S+ G
Sbjct:  434 QVLSLLWSTTEKELLSSHGYAENQLCLWKYPSMVKTKELSGHTSRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSSSDGGAGGRGSAAG 526

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BLAST of jgi.p|Trimin1|170337 vs. uniprot
Match: A0A5J4Y0D7_9CHLO (ANAPC4_WD40 domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y0D7_9CHLO)

HSP 1 Score: 135 bits (339), Expect = 9.970e-36
Identity = 67/90 (74.44%), Postives = 73/90 (81.11%), Query Frame = 0

Query:    1 QVCALQWSRTEKELLSSHGYIDNSLCLWKYPSMVKVKELKGHTKRVLHMAQSPDGQTVVSGAADETLRFWNVFAPA--ASKARKSASGGS 88
            QVCALQWSR E+E+LSSHG+  N LCLWKYPSMVKV E  GHT RVLHMAQSPDG TVVS AADETLRFW VFA A  A KA+ S++G S
Sbjct:  339 QVCALQWSRHEREILSSHGFSQNQLCLWKYPSMVKVAEFTGHTSRVLHMAQSPDGTTVVSAAADETLRFWRVFAEASVAQKAKPSSTGNS 428

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BLAST of jgi.p|Trimin1|170337 vs. uniprot
Match: D0N7K8_PHYIT (Cell division cycle protein 20 n=26 Tax=Phytophthora TaxID=4783 RepID=D0N7K8_PHYIT)

HSP 1 Score: 135 bits (341), Expect = 1.000e-35
Identity = 66/85 (77.65%), Postives = 70/85 (82.35%), Query Frame = 0

Query:    1 QVCALQWSRTEKELLSSHGYIDNSLCLWKYPSMVKVKELKGHTKRVLHMAQSPDGQTVVSGAADETLRFWNVFAPAASKARKSAS 85
            QVC+L WS TEKELLSSHGY  N LCLWKYPSM KVKEL GHT RVLH+A SPDG+TVVSGAADETLRFW VF P   KARK+ S
Sbjct:  385 QVCSLLWSATEKELLSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGETVVSGAADETLRFWKVFGPNR-KARKAGS 468

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|170337 vs. uniprot

BLAST of jgi.p|Trimin1|170337 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YM49_9STRA	1.850e-65	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A225V3I2_9STRA	7.630e-37	73.96	Cell division cycle protein 20 (Fragment) n=1 Tax=...	[more]
A0A7S2KKP2_9STRA	2.270e-36	78.67	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
H3GL68_PHYRM	2.490e-36	75.00	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]
A0A0N7L6D5_PLAHL	6.460e-36	73.96	Cell division cycle protein 20 n=1 Tax=Plasmopara ...	[more]
A0A484EGT9_BRELC	6.660e-36	73.96	Uncharacterized protein n=1 Tax=Bremia lactucae Ta...	[more]
A0A5D6XRA5_9STRA	7.800e-36	74.47	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
A0A6H5KU25_9PHAE	9.250e-36	69.89	ANAPC4_WD40 domain-containing protein n=2 Tax=Ecto...	[more]
A0A5J4Y0D7_9CHLO	9.970e-36	74.44	ANAPC4_WD40 domain-containing protein n=1 Tax=Treb...	[more]
D0N7K8_PHYIT	1.000e-35	77.65	Cell division cycle protein 20 n=26 Tax=Phytophtho...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 32..71 e-value: 1.3E-7 score: 41.2
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 35..71 e-value: 5.4E-7 score: 30.2
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 39..72 score: 14.05078
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..75 e-value: 1.9E-26 score: 94.8
IPR033010	The WD repeat Cdc20/Fizzy family	PANTHER	PTHR19918	CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED	coord: 1..81
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 58..72
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 39..72 score: 11.629227
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	SUPERFAMILY	50998	Quinoprotein alcohol dehydrogenase-like	coord: 1..76

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_71	contig	Contig_71:701165..702661 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|170337	mRNA_12432	Tribonema minus UTEX_B_3156	mRNA	Contig_71 701165..702661 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|170337|e_gw1.71.52.1 ID=Trimin1|170337|e_gw1.71.52.1|Name=jgi.p|Trimin1|170337|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=102bp
QVCALQWSRTEKELLSSHGYIDNSLCLWKYPSMVKVKELKGHTKRVLHMA
QSPDGQTVVSGAADETLRFWNVFAPAASKARKSASGGSSSSLGSGRAIGI
R*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR033010	Cdc20/Fizzy
IPR019775	WD40_repeat_CS
IPR011047	Quinoprotein_ADH-like_supfam