Trimin1|170324|e_gw1.71.28.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|170324
Unique NameTrimin1|170324|e_gw1.71.28.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length316
Homology
BLAST of jgi.p|Trimin1|170324 vs. uniprot
Match: A0A835YV81_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV81_9STRA)

HSP 1 Score: 180 bits (457), Expect = 4.310e-51
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0
Query:    1 CRADGCEKRSAYGIIGGGPQWCVAHKASAMGHVTSRHCELGRKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLGYDFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYXXHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHGHFLHNCRGSICHSSNIGNRSVEEMFTDATVFAVWSGGDELPTFMRAIQQRFNWDEVVMPV 315
            CRADGCEKRSAYGIIGGGPQWCVAHKASAMGHVTSRHCELGRKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLGYDFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYXXHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHGHFLHNCRGSICHSSNIGNRSVEEMFTDATVFAVWSGGDELPTFMRAIQQRFNWDEVVMPV
Sbjct:    1 CRADGCEKRSAYGIIGGGPQWCVAHKASAMGHVTSRHCELGRKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLGYDFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYXXHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHGHFLHNCRGSICHSSNIGNRSVEEMFTDATVFAVWSGGDELPTFMRAIQQRFNWDEVVMPV 315          
BLAST of jgi.p|Trimin1|170324 vs. uniprot
Match: A0A835YYI8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYI8_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.010e-16
Identity = 39/57 (68.42%), Postives = 45/57 (78.95%), Query Frame = 0
Query:  258 LHNCRGSICHSSNIGNRSVEEMFTDATVFAVWSGGDELPTFMRAIQQRFNWDEVVMP 314
            L +CRG ICH +NIG RSVEE+F DAT F VWSGGD+LP F+ AI QR  W+EVVMP
Sbjct:  461 LRHCRGEICHINNIGTRSVEEIFPDATAFVVWSGGDDLPKFIEAISQRLKWEEVVMP 517          
BLAST of jgi.p|Trimin1|170324 vs. uniprot
Match: A0A836CFL9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFL9_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 6.880e-16
Identity = 38/44 (86.36%), Postives = 39/44 (88.64%), Query Frame = 0
Query:    1 CRADGCEKRSAYGIIGGGPQWCVAHKASAMGHVTSRHCELGRKQ 44
            CRADGCEK SAYGIIGGGPQWCVAHKAS M HVT +HCEL RKQ
Sbjct:   22 CRADGCEKGSAYGIIGGGPQWCVAHKASDMEHVTGKHCELCRKQ 65          
BLAST of jgi.p|Trimin1|170324 vs. uniprot
Match: A0A835ZFF0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFF0_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 7.880e-11
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 0
Query:  253 EHGHFLHNCRGSICHSSNIGNRSVEEMFTDATVFAVWSGGDELPTFMRAIQQRFNWDEV-VMP 314
            +HG  L  C G ICH +NIG RS+EEMF DAT F  W+GGD++ TF+RA+  R  + ++ +MP
Sbjct:  387 KHGRTLRYCLGPICHINNIGTRSIEEMFPDATAFIAWTGGDDVDTFIRAVGHRLKFGDLQIMP 449          
BLAST of jgi.p|Trimin1|170324 vs. uniprot
Match: A0A835ZBU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBU2_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 4.350e-10
Identity = 31/62 (50.00%), Postives = 42/62 (67.74%), Query Frame = 0
Query:  254 HGHFLHNCRGSICHSSNIGNRSVEEMFTDATVFAVWSGGDELPTFMRAIQQRFNWDEV-VMP 314
            HG  L +C G ICH +NIG RS+EEMF DAT F  W+GGD++ TF+ A+  R    ++ +MP
Sbjct:  343 HGRRLEHCLGQICHINNIGTRSIEEMFPDATAFIQWTGGDDIETFIHALSHRLQLGDLCIMP 404          
BLAST of jgi.p|Trimin1|170324 vs. uniprot
Match: A0A835Z3Z4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Z4_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.100e-8
Identity = 32/63 (50.79%), Postives = 43/63 (68.25%), Query Frame = 0
Query:  253 EHGHFLHNCRGSICHSSNIGNRSVEEMFTDATVFAVWSGGDELPTFMRAIQQRFNWDEV-VMP 314
            EHG  L  C G+ICH +NIG RS++E+F DAT + VWSG DE+  F+ A+  R  + +V VMP
Sbjct:  530 EHGRRLEYCLGAICHINNIGARSLQEIFPDATAYIVWSGIDEVDGFITAVNHRLQFGDVLVMP 592          
BLAST of jgi.p|Trimin1|170324 vs. uniprot
Match: A0A835ZAP8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAP8_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 4.150e-8
Identity = 26/40 (65.00%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    1 CRADGCEKRSAYGIIGGGPQWCVAHKASAMGHVTSRHCEL 40
            CRA+GCEKRS YGIIGGG QWC+ HK   M  V ++ CEL
Sbjct:   78 CRAEGCEKRSTYGIIGGGAQWCITHKEEGMEDVINKRCEL 117          
BLAST of jgi.p|Trimin1|170324 vs. uniprot
Match: A0A835Z3T1_9STRA (EsV-1-7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3T1_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 6.300e-5
Identity = 23/39 (58.97%), Postives = 27/39 (69.23%), Query Frame = 0
Query:    1 CRADGCEKRSAYGIIGGGPQWCVAHKASAMGHVTSRHCE 39
            CRA+GCEKRSAYGI G G Q C+ H    M +V S+ CE
Sbjct:   61 CRAEGCEKRSAYGITGAGAQRCITHNEEGMENVISKRCE 99          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|170324 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A835YV81_9STRA4.310e-51100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YYI8_9STRA1.010e-1668.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CFL9_9STRA6.880e-1686.36Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835ZFF0_9STRA7.880e-1150.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZBU2_9STRA4.350e-1050.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z3Z4_9STRA1.100e-850.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZAP8_9STRA4.150e-865.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z3T1_9STRA6.300e-558.97EsV-1-7 n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 1..27
e-value: 2.5
score: 8.8
coord: 43..69
e-value: 0.0015
score: 19.1
coord: 182..213
e-value: 1.6E-5
score: 25.3
coord: 73..108
e-value: 1.7E-4
score: 22.1
coord: 112..143
e-value: 3.4E-5
score: 24.3
coord: 217..248
e-value: 3.7E-5
score: 24.2
coord: 147..178
e-value: 1.3E-7
score: 32.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_71contigContig_71:33789..34833 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|170324mRNA_12365Tribonema minus UTEX_B_3156 mRNAContig_71 33789..34833 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|170324|e_gw1.71.28.1 ID=Trimin1|170324|e_gw1.71.28.1|Name=jgi.p|Trimin1|170324|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=316bp
CRADGCEKRSAYGIIGGGPQWCVAHKASAMGHVTSRHCELGRKQSSFGRV
WLQPIRCSDHKEDYMEDVVNRRCELCSKQPSLGYDFGYDWMSPLRCADHR
HDDMDNVVSKQCESCSTQPSYGYHWMRPLRCIDHRDDDMDNVVSKQCALC
STRPSFGFEWKRPLRCSDHREENMENVVDKTCELCSRQPSLGYDWQRPLR
CAAHKEQDMTNVVDKSCDLCTKSASLGYDWRRPLRCADHKAEGMHNVVTQ
RCEHGHFLHNCRGSICHSSNIGNRSVEEMFTDATVFAVWSGGDELPTFMR
AIQQRFNWDEVVMPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys