Trimin1|169920|e_gw1.68.95.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|169920
Unique NameTrimin1|169920|e_gw1.68.95.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length703
Homology
BLAST of jgi.p|Trimin1|169920 vs. uniprot
Match: A0A836C9X0_9STRA (DNA topoisomerase I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9X0_9STRA)

HSP 1 Score: 1345 bits (3482), Expect = 0.000e+0
Identity = 679/679 (100.00%), Postives = 679/679 (100.00%), Query Frame = 0
Query:    1 MPAPSACPSACGTPAPQTIYLLSQGHTAQPPPVPLPPRAPLLPLXXXXXXLVLQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDEADTVGCCTLRVEHMTFGPAGTREMELEFLGKDSMLFKQNIDFTAYGDIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSADALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPLKGRGSSQDADDDEEKKELTQRKFEGSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFDFETLRAVTAESSDEPKAVTAVADDA 679
            MPAPSACPSACGTPAPQTIYLLSQGHTAQPPPVPLPPRAPLLPLXXXXXXLVLQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDEADTVGCCTLRVEHMTFGPAGTREMELEFLGKDSMLFKQNIDFTAYGDIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSADALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPLKGRGSSQDADDDEEKKELTQRKFEGSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFDFETLRAVTAESSDEPKAVTAVADDA
Sbjct:    1 MPAPSACPSACGTPAPQTIYLLSQGHTAQPPPVPLPPRAPLLPLXXXXXXLVLQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDEADTVGCCTLRVEHMTFGPAGTREMELEFLGKDSMLFKQNIDFTAYGDIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSADALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPLKGRGSSQDADDDEEKKELTQRKFEGSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFDFETLRAVTAESSDEPKAVTAVADDA 679          
BLAST of jgi.p|Trimin1|169920 vs. uniprot
Match: A0A7S2WTQ7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTQ7_9STRA)

HSP 1 Score: 702 bits (1812), Expect = 6.390e-243
Identity = 361/639 (56.49%), Postives = 455/639 (71.21%), Query Frame = 0
Query:   53 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDEADTVGCCTLRVEHMTFGPAGT--REMELEFLGKDSMLFKQNIDFTAYGDIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSADALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPLKGRGSS-------------------------QDADDDEEKKELTQRKFE-----GSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFDFETLR 659
            +++YKWWE   L  G+QW  LEHNG+ FP EY+PHGV L Y+G+++ L P+ EE+ATF+  VP DGPQLGD  T  +F  NFF+D+K+++   H +K  KF  CDF A+R H+++ RLIKKAAT+ E+ AAK EK+     +G A+VDGHLEK+GN + EPP LFRGRGKHP  GK+K+R  P +VT+NIG+ AK+P CP PG AWG VQHD  V W++TW ENI   NKY ML+A SSFKGKSD  KY KAMRLKG I  IR +Y++ LNA     RQLATAMW+ID LALRVGGEKGEDEADTVGCC+LRVEH+ FG  G    ++ELEFLGKDSM +K+  DF+ YG++G +VF N  +FCK +KP +QV  ++DP  LN+HLQS+MPGL+AKVFRTYNASETLQ ++P+ +++K M+VQ KV+ YN ANR+VAILCNHQRTVS AM KS + L ER+A  K Q+ +L A LK  K GK K + +K    +                         Q     E  KEL QR+        SH+F+  PS EQL ++I+ W  K++K+++D+R+K+ NKEV+LGTSKINY DPRISVAWCKR EVPIER+F KTLRDKFVWAM VPPDW   FE LR
Sbjct:  154 MKSYKWWEHEDLPAGQQWRTLEHNGLCFPPEYKPHGVALKYEGKDLVLPPDLEELATFYGLVPDDGPQLGDPETRPIFQKNFFTDFKKALGGEHEIK--KFQGCDFSAIREHIEKERLIKKAATEVEKQAAKEEKQSLQFKYGYALVDGHLEKIGNTMAEPPSLFRGRGKHPLMGKVKQRVLPEQVTINIGKNAKIPVCPQPGHAWGAVQHDNTVTWMATWHENILGKNKYVMLAAQSSFKGKSDRGKYEKAMRLKGCIGKIRADYKKNLNAKDIFSRQLATAMWVIDILALRVGGEKGEDEADTVGCCSLRVEHIKFGQEGQGPHDIELEFLGKDSMQYKETTDFSRYGEVGIQVFQNFVSFCKKKKPDQQVLDQLDPPELNRHLQSIMPGLTAKVFRTYNASETLQNEVPTPESMKGMSVQQKVLMYNEANRKVAILCNHQRTVSKAMEKSMDTLHERLALFKRQKNELSAMLKAVKSGKTKDVKVKKETDALEEAKNXXXXXXXXXXXXVTPEQKIQATKATEAAKEL-QRQARLTVAGSSHLFSRVPSAEQLTKRIDQWIEKIRKLQLDIRNKDDNKEVALGTSKINYCDPRISVAWCKRCEVPIERVFPKTLRDKFVWAMFVPPDW--SFEALR 787          
BLAST of jgi.p|Trimin1|169920 vs. uniprot
Match: A0A7S3XV41_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV41_HETAK)

HSP 1 Score: 701 bits (1808), Expect = 2.220e-241
Identity = 363/671 (54.10%), Postives = 460/671 (68.55%), Query Frame = 0
Query:   51 LVLQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFD----KCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDEADTVGCCTLRVEHMTFGPAGTRE----MELEFLGKDSMLFKQNIDFTAYGDIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSADALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPL-----------------KGRGSSQDADDDEEKKELTQR--------------KFEGSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFDFETLRAVTAESSDEPKAVT---AVADDA 679
            L ++A+KWWE P L  G  W +LEHNG+ FP E++ HG+ L+Y+GE ++LSPE EE+AT +A +P DGPQLGD AT  +F  NF+SD+K+ +    P K   FD    K DF  ++ +L Q++++KK  TD ER   K EKE    L G AIVDGHLE+VGN +MEPPGLFRGRGKHPKTG  K+R +P +VT+NIGE A+ P+CP+PG AW NVQHDP V W++TW ENI   NKY  L+ASSSFKGKSD +KYNKA  LKG+I+ IR +Y + L   +   RQ+ATAMW+ID LALRVGGEKGEDEADTVGCC+LRVEH+ F  +G       +ELEFLGKDSMLFKQ IDF  YG +G +VF NL  FC+ +K +E VF ++ PT LN+HL SLMPGLSAKVFRTYNA+ETLQ +LP  +A+  +TVQ KVV YN ANR+VAILCNHQRTVS A     EN+ ER+  +K QR +LK   +L K GK K++PL                 K +     A   EEKK   +               K   SH+F   PS +Q++ ++  W  K+ K+++D++D+++NKEV+LGTSKINYMDPR+SVAWCK NEVPIE+IFAKTLRDKF WA  VPPDWRF+   L+ V  +  +   AV    AVA +A
Sbjct:  182 LAMKAFKWWEAPELEEGILWRYLEHNGIIFPPEHKVHGIKLLYEGEPLDLSPEQEELATLYAAMPDDGPQLGDPATRPIFQKNFWSDFKQVLDPKGPWKGKNFDVAFKKFDFSLIKEYLNQQKILKKTQTDSERQKTKDEKEAAVLLHGYAIVDGHLERVGNMMMEPPGLFRGRGKHPKTGLFKRRVFPGQVTINIGENARPPKCPLPGHAWMNVQHDPTVTWMATWNENIMGSNKYVQLAASSSFKGKSDRDKYNKAATLKGYINKIREDYGQNLWKKSHRPRQIATAMWIIDVLALRVGGEKGEDEADTVGCCSLRVEHLRFDTSGDEARKYTLELEFLGKDSMLFKQEIDFGKYGKVGRRVFKNLVEFCQKKKRSEDVFDQLTPTILNQHLSSLMPGLSAKVFRTYNATETLQNELPKPEAMAGLTVQEKVVLYNAANRKVAILCNHQRTVSHAAAAQLENVNERLDLLKVQRKELKDIYRLLKAGKHKRVPLQSDRGKEKVAAAAARLKKAKDLKAAASTVEEKKHAIEYEEKAKAKRVAAMKIKQSESHLFVKMPSTKQVKGRVIAWGQKIAKLKLDIKDRDENKEVALGTSKINYMDPRVSVAWCKTNEVPIEKIFAKTLRDKFNWAFAVPPDWRFEAPLLQKVEEDDDESDTAVDDTDAVASEA 852          
BLAST of jgi.p|Trimin1|169920 vs. uniprot
Match: A0A4D9D5J1_9STRA (TOPEUc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5J1_9STRA)

HSP 1 Score: 685 bits (1767), Expect = 6.370e-235
Identity = 365/644 (56.68%), Postives = 452/644 (70.19%), Query Frame = 0
Query:   53 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTG--HPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTS-EMRQLATAMWLIDKLALRVGGEKGEDEADTVGCCTLRVEHMTFGP----------AGTREMELEFLGKDSMLFKQNIDFTAYGDIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSADALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKI-----------PLKGRGSSQD----ADDDEEK----------KELTQR----KFEGSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFD 654
            ++A+KWW++ PL  G QW  LEHNG+ FP +Y PHGV ++YDG+E+EL  + EE+ATFFA +P DGPQLG   T K+F  NFF  +KE +       L    FDKCDF  +RAHL+ +++IKKAAT  E+A  KA KE R   +G AIVDG +EKVGNF MEPPGLFRGRG HP  G +K+R  P  + VN+G +A+VP CP+PG AW  VQHD  V WL++WKEN+ N  KY ML+ASSSFKGKSDMEKY+KA RLK  I  IRR+YE  L      E +Q+ATAMW+IDKLALRVGGEKGEDEADTVGCC+LR+EH+ F P          A   E+ELEFLGKDSMLFKQ IDF +YG+ G +VF NL  F K +KP + VF+ + P+ LN HL SLMPGLSAKVFRTYNASETLQ +LP+ + L  M+V  KVV YN+ANR+VAILCNHQRTV+  M  +  NL ER+  +K+Q+ +L    +L K GK  KI            +K    ++D    A   EEK          KEL ++    K + +H+FA  P++EQ+ RKIE W  K+ K+E+D+R+K++NKEV+LGTSKINYMDPRISVAWCKR EVPIERIFAKTLRDKFVWAM VPP WRF+
Sbjct:  221 MKAFKWWDQEPLPQGIQWRALEHNGIFFPPDYVPHGVKMLYDGKEVELPSDLEEVATFFASMPPDGPQLGHPDTRKIFVKNFFGQFKEMLKDKLEDDLGIKDFDKCDFSPIRAHLETQKMIKKAATVEEKALVKAGKEERQDHYGYAIVDGRIEKVGNFNMEPPGLFRGRGMHPLMGMIKERCLPENIIVNLGPDARVPPCPLPGHAWDRVQHDNKVTWLASWKENVLNGVKYVMLAASSSFKGKSDMEKYDKAARLKQCIGRIRRDYEGNLGKKADREAKQIATAMWIIDKLALRVGGEKGEDEADTVGCCSLRLEHLRFPPPVDDGGESSGAKQYEIELEFLGKDSMLFKQTIDFASYGENGKQVFKNLRHFVKDKKPDQDVFEMLTPSVLNAHLGSLMPGLSAKVFRTYNASETLQNELPTVEDLAGMSVGDKVVAYNDANRKVAILCNHQRTVTKTMETALGNLQERLQLLKDQKKELLGQKELLKSGKTNKIRTRKDDVLTDKAVKAMEKAEDLRKKAATPEEKIKASHALDEAKELKRQAQAAKAKDAHLFARPPTKEQVDRKIEQWREKITKLELDIRNKDENKEVALGTSKINYMDPRISVAWCKRVEVPIERIFAKTLRDKFVWAMGVPPSWRFE 864          
BLAST of jgi.p|Trimin1|169920 vs. uniprot
Match: B5Y3I3_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3I3_PHATC)

HSP 1 Score: 661 bits (1705), Expect = 1.300e-229
Identity = 343/615 (55.77%), Postives = 436/615 (70.89%), Query Frame = 0
Query:   53 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDE-ADTVGCCTLRVEHMTFGPAG----TREMELEFLGKDSMLFKQNIDF--TAYGD---IGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSAD---ALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPLKGRGSSQDADDDEEKKELTQRKFEGSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFD 654
            +Q++ WW  P L  G QW  +EH+G+SFP+ YEPHGV +MYDG+ +EL+P  EE ATFFA +  +G  LG+  T K+F  NFF+D++E +   H +K  +F KCDF  +R HL ++++I+KA TD ER A K ++ +  H FG +IVDGH+E+VGNF MEPPG FRGRG+HPK GKLK R  P +V++N+ E A VP CPVPG AW +V+HDP   WL+TWKENINN +KY  L+A SSFKGKSD  KY+KA  L  +I+ IR++Y++ L +   E++QLATA W+ID+LALRVGGEK  DE ADTVGCC+LRVEH+ F P G    ++E+ELEFLGKDSMLFKQ IDF  T Y D   +G++V+DNL +FCK +K +E+VF  I+PT LN HL+  M GLSAKVFRTYNAS+TLQ +L   +   A +N+T   KVVEYNNANREVAILCNHQR+VS A     EN+  +V  +K+Q+ DLK  LKL   G+A KIP K                              T ++EQ+ +KIE W  K+ KME+DL+ K+ NKEVSLGTSKINYMDPRISVAWCKRNEVPIE+IF+KTLRDKF WAM V PDW F+
Sbjct:    1 MQSFLWWNAPELPEGCQWRTMEHSGVSFPETYEPHGVKMMYDGQPVELTPIQEEAATFFAAMDPEGMHLGNPKTGKIFIKNFFADFREILGKKHIVK--EFKKCDFEPIRKHLNEQKIIRKAITDEERKANKEDRSQTLHQFGFSIVDGHIERVGNFNMEPPGAFRGRGEHPKMGKLKSRVLPEQVSLNLSECAPVPPCPVPGHAWSDVRHDPRGQWLATWKENINNQSKYMQLAAQSSFKGKSDRSKYSKAGLLCKNIEKIRKSYKKDLKSKDMEVKQLATATWVIDRLALRVGGEKDTDEEADTVGCCSLRVEHLHFDPNGEGGDSKEIELEFLGKDSMLFKQTIDFGATLYNDSNGLGAQVYDNLKSFCKKKKSSEEVFHVINPTMLNNHLKQFMDGLSAKVFRTYNASKTLQTELRKYEVSPAWRNLTASEKVVEYNNANREVAILCNHQRSVSKAQETQLENITAKVGMLKKQKKDLKKILKLLTAGEADKIPTK--------------------------KSPQTMTDEQVVKKIEAWNGKISKMEMDLKHKDDNKEVSLGTSKINYMDPRISVAWCKRNEVPIEKIFSKTLRDKFNWAMAVVPDWEFN 587          
BLAST of jgi.p|Trimin1|169920 vs. uniprot
Match: A0A7R9YDN3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDN3_9STRA)

HSP 1 Score: 664 bits (1713), Expect = 1.300e-228
Identity = 342/633 (54.03%), Postives = 441/633 (69.67%), Query Frame = 0
Query:   53 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDEADTVGCCTLRVEHMTFGPAGTREMELEFLGKDSMLFKQNIDFTAYGDIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSADALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWL-KLAKDGKAKKIPLKGRGSSQDADD--------------------------DEEKK---ELTQRKFEGSHMFANTPSE-EQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFD 654
            ++A+KWWE P    G QW  LEH G++FP +Y PH  P+ YDG ++ L+   EE+AT++AD+PLDGPQLGD   A  F+ NF SD+++ +   H +++  FDK  +  +R +   ++L+K++ATD E+A  KA+K      FG A+VDGHLEKVGNF +E PGLFRGRGKHPKTGK+K+R  P ++T+N GE A  P CP+PG AWG VQHD  V WL TW+ENI   NKY ML+A SS KGKSD +KY KA +LKGHI+AIRRNY  GL + +   RQ+ATAMWLID  ALRVGGEKGEDEADTVGCC+LR+EH TF      +++LEFLGKDSM FKQ IDF+ YGDIG KV  NL  F +G++ +E VF +++PT LN HLQS+MPGL+AKVFRTYNASETLQ +LP A+ ++ +TV  KVV+YN ANR+VAILCNHQ+TVS A  +  + L +++  +K Q+ +L A   KLAK G+ K I L    + Q + D                          DE KK   E    KF  +H+F   PS+  ++  +I  WT K++KME+ LR+K  NKEV+LGTSKINYMDPRI+VAWCKR E+PIER+FAK LR+KF WAM VPPDW+F+
Sbjct:  109 MKAFKWWEHPDHPEGIQWRQLEHAGVAFPPDYVPHNTPITYDGRDIALNAAAEEVATWYADLPLDGPQLGDPEWAPTFNKNFMSDFRKVLGDRHAIRS--FDKISWTGLRNYTASKKLVKRSATDDEKAKVKADKLATRSRFGFALVDGHLEKVGNFTIELPGLFRGRGKHPKTGKIKERIPPEQLTLNFGENAPPPICPIPGHAWGAVQHDQSVTWLVTWRENIMEANKYVMLAAMSSLKGKSDRDKYAKAAKLKGHIEAIRRNYRTGLQSKSGGDRQIATAMWLIDIYALRVGGEKGEDEADTVGCCSLRLEHFTFHEDSESQVDLEFLGKDSMRFKQTIDFSTYGDIGMKVLRNLKEFMRGKRKSEDVFDRLNPTILNNHLQSIMPGLTAKVFRTYNASETLQNELPDAEDMEGLTVPEKVVQYNEANRKVAILCNHQKTVSSAAQEGLDALAKKLEDLKSQKRELVAIKNKLAK-GETKGIRLSTENAIQASADAAKARADRLRNSAKTDEERIAATKATDESKKLRREAAAVKFSQAHLFKQIPSDVSKVTSRINKWTEKIQKMELQLRNKTDNKEVALGTSKINYMDPRITVAWCKRVELPIERVFAKALREKFNWAMAVPPDWKFE 738          
BLAST of jgi.p|Trimin1|169920 vs. uniprot
Match: A0A7S3PD47_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PD47_9STRA)

HSP 1 Score: 662 bits (1708), Expect = 1.260e-227
Identity = 342/647 (52.86%), Postives = 454/647 (70.17%), Query Frame = 0
Query:   53 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDE-ADTVGCCTLRVEHMTFGPAG----TREMELEFLGKDSMLFKQNIDFTAY-----GDIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSADAL---KNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPLKGRGSSQDADDD--------------------------------EEKKELTQRKFEGSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFD 654
            +QA+ WWE P LA G  WS +EH+G+SFP+EYEPHGV ++YDG+ ++L+P  EE ATFFA +  DG  LG+  TA +F  NFF+D++E +   H +K+  F KCDF  +R HL ++++I+KA +D ER A K ++ +  H +G A+VDGH+E+VGNF MEPPG FRGRG+HPK GKLK R  P +V++N  E A +P CPVPG AWG+V+HDP   WL+TWKENIN  +KY  L+A SSFKGKSD  KY+KA  L  +I  IR++Y++ L +  +E +QLATA W+ID+LALRVGGEK  DE ADTVGCC+LRVEH+ F P G     +E+ELEFLGKDSMLFKQ IDF +      G  G+K+++NL +FCK +K +++VF KI+PT LN HL+  M GLSAKVFRTYNAS TLQQ+L   +A    + +T   KVVEYN+ANREVAILCNHQR+VS A     EN+GE++A +K+Q+ +LK  LK   +   K IP   R S +  +DD                                +++++L  +KF  +H++   P+ +Q++++IE WT K+ KME+DL+ K+ NKEVSLGTSKINYMDPRISVAWCKRNEVPIE++F+KTLRDKF WAM VPP+W F+
Sbjct:  110 MQAFLWWEAPVLAEGMNWSTMEHSGVSFPEEYEPHGVKMLYDGQPVDLTPAQEEAATFFAAMDPDGMHLGNPKTAPIFIKNFFADFREILGKKHIIKD--FKKCDFEPIRKHLNEQKIIRKAISDKERQANKEDRNQTLHKYGYAVVDGHIERVGNFNMEPPGAFRGRGEHPKMGKLKSRVSPEQVSLNCSECAPIPACPVPGHAWGDVRHDPRGQWLATWKENINGQSKYMQLAAQSSFKGKSDRSKYSKAALLCKYIHDIRKSYKKDLKSKDTETKQLATATWIIDQLALRVGGEKDTDEEADTVGCCSLRVEHLHFDPNGEGDENKEIELEFLGKDSMLFKQTIDFGSALYNDNGGHGTKIYENLKSFCKKKKSSDEVFDKINPTLLNAHLKKFMDGLSAKVFRTYNASITLQQELRKHEAAAGWERLTPAEKVVEYNSANREVAILCNHQRSVSKAQETQLENIGEKIATLKKQKKELKGMLKKLINND-KDIPT--RKSFKAMEDDVKTALAKAKEMKDKAKXXXXXXXXXXXXXXXXQQRRDLADKKFRRAHLWEKPPTTDQVKKRIENWTAKINKMELDLKHKDDNKEVSLGTSKINYMDPRISVAWCKRNEVPIEKVFSKTLRDKFNWAMAVPPEWEFN 751          
BLAST of jgi.p|Trimin1|169920 vs. uniprot
Match: A0A7S2CY07_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CY07_9STRA)

HSP 1 Score: 664 bits (1714), Expect = 1.670e-227
Identity = 346/637 (54.32%), Postives = 435/637 (68.29%), Query Frame = 0
Query:   53 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDEADTVGCCTLRVEHMTFG--PAGTREMELEFLGKDSMLFKQNIDF--TAYGDIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSADALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPLKGRGSSQDADDDEEKKELTQRKFE--------------------------------GSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRF 653
            ++A+KWWE   L  G QW  +EHNG++FP EYEPHGVPL+Y GE +ELSPE EE+ATF+A VP DGPQLGD  T  +F  NFF+D+K+ +   H ++  +F  CDF  + A++ ++++I KAATD E+A  K EKE     +G AIVD HLE+VGN + EPP LFRGRGKHP  GK+K+R    +V++N+ E   VP+CP PG AWG VQHD  V WL+TW ENI   NKY ML+A SSFKGKSD +KY KAM+LKG I  IR +Y++ L+A     RQLATAMW+ID LALRVGGEKG+DEADTVGCC+LRVEH+  G    G  E+ELEFLGKDSML+K+  DF    YGD G KV+ NL  FCKG+K  +QV   ++P  LN+HLQ+LMPGL+AKVFRTYNASETLQ +LPS   L+  TV  KV+ YN ANR+VAILCNHQRTVS AM  +   LGER+  ++ Q+ +L + LK  K G   K   K +   + A DD                                            GSH+FA  PSEEQ++++I+ W  K++K+E+D+R+K+ NKEV+LGTSKINY DPRI+VAW KR EVP+ER+F KTLRDKFVWAM VPPDW F
Sbjct:  192 MKAFKWWEHEDLPDGVQWLGMEHNGLAFPPEYEPHGVPLLYKGEPIELSPELEELATFYAAVPDDGPQLGDPETRTIFQKNFFTDFKKMLGKSHKVQ--EFKHCDFSRIAANIAEQKMINKAATDVEKANKKREKEELQFKYGFAIVDKHLERVGNTMCEPPSLFRGRGKHPLMGKVKQRCTTEQVSLNLAETTTVPRCPQPGHAWGAVQHDNSVTWLATWHENILGKNKYVMLAAQSSFKGKSDRDKYLKAMKLKGSIKKIRADYKKNLDAKDKFSRQLATAMWVIDVLALRVGGEKGDDEADTVGCCSLRVEHLHCGLPEQGPHEIELEFLGKDSMLYKETTDFGREEYGDTGKKVYKNLIQFCKGKKQEQQVLDLLNPPELNRHLQTLMPGLTAKVFRTYNASETLQNELPSPSDLQGKTVPEKVLAYNEANRKVAILCNHQRTVSKAMQTNMSVLGERLKLLQRQKVELGSLLKQIKKGGNIKSSQKSKDMGKQAVDDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAAAAGSHLFAKVPSEEQVKKRIDVWREKIRKLELDIRNKDDNKEVALGTSKINYCDPRITVAWLKRTEVPVERVFPKTLRDKFVWAMPVPPDWSF 826          
BLAST of jgi.p|Trimin1|169920 vs. uniprot
Match: A0A7S2YPG0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YPG0_9STRA)

HSP 1 Score: 660 bits (1702), Expect = 7.280e-227
Identity = 348/648 (53.70%), Postives = 452/648 (69.75%), Query Frame = 0
Query:   53 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDE-ADTVGCCTLRVEHMTFGP----AGTREMELEFLGKDSMLFKQNIDFTAY------GDIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQL---PSADALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPLKGRGSSQDADDD--------------------------------EEKKELTQRKFEGSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFD 654
            +QA+ WWE P LA G  WS +EH G+SFP++YEPHGV ++Y+G  ++L+P  EE ATFFA +  DG  LG+  TA +F  NFF+D+K  +   H ++  KF+KCDF  +R HL ++++I+KA TD E+ A K ++ +  H FG AIVDGH+E+VGN+ MEPPG FRGRG+HPK GKLK R  P +V++N+ E A VP+CPVPG AWG+V+HDP   WL+TWKENIN  +KY  L+A SSFKGKSD  KY+KA  L  +I  IR++Y++ L     E RQLATA W+ID+LALRVGGEK  DE ADTVGCC+LRVEH+TF P       +E+ELEFLGKDSMLFKQ IDF A       G +G++VF+NL AFCK +K  E+VF  I+PT LN HL+  M GL+AKVFRTYNAS+TLQ++L    ++    N++   KVV+YNNANREVAILCNHQR+VS A     E++G ++A +K+QR  LKA  +    G +  IPL  R SSQ  D+D                                ++K++L Q KFE +H++   PS++Q++++I  WT K+ KME+DL+ K+ NKEVSLGTSKINYMDPRISVAWCKRNEVPIE+IF+KTLRDKF WAM V PDW F+
Sbjct:   99 MQAFLWWEAPVLAEGVNWSTMEHAGVSFPEDYEPHGVKMLYNGTPVDLTPAQEEAATFFAAMDPDGMHLGNPKTAPIFIKNFFADFKGILGRQHVIQ--KFEKCDFSPIRQHLNEQKMIRKAITDDEKKANKEDRNQVLHRFGFAIVDGHIERVGNYNMEPPGAFRGRGEHPKMGKLKSRVAPEQVSMNLSECAAVPKCPVPGHAWGDVRHDPRGQWLATWKENINGQSKYMQLAAQSSFKGKSDRSKYSKAGLLCKYITKIRKSYKKDLKNKNVETRQLATATWVIDRLALRVGGEKDTDEEADTVGCCSLRVEHLTFDPNDEGIDNKEIELEFLGKDSMLFKQTIDFGAEMYNQGEGGLGNQVFENLKAFCKKKKKTEEVFHAINPTMLNAHLKQFMDGLTAKVFRTYNASKTLQEELRKHETSPLWANLSATEKVVQYNNANREVAILCNHQRSVSKAQETQLESIGVKLATLKKQRKQLKAIGRKLVAGDSD-IPL--RKSSQAMDEDVKAALAKAKRMKEAATTKEQKIKATEADEKAKQKKRDLAQAKFEKAHLWEKVPSQDQVKKRIVAWTAKVAKMELDLKHKDDNKEVSLGTSKINYMDPRISVAWCKRNEVPIEKIFSKTLRDKFNWAMAVSPDWEFN 741          
BLAST of jgi.p|Trimin1|169920 vs. uniprot
Match: A0A7S4VCD4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VCD4_9STRA)

HSP 1 Score: 656 bits (1692), Expect = 1.480e-225
Identity = 350/647 (54.10%), Postives = 442/647 (68.32%), Query Frame = 0
Query:   53 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQCPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEKYNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEKGEDE-ADTVGCCTLRVEHMTFGPAGTR----EMELEFLGKDSMLFKQNIDFTA--YGD---IGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRTYNASETLQQQLPSADAL---KNMTVQAKVVEYNNANREVAILCNHQRTVSGAMLKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPLK----------------GRGSSQDADDDEEKKELTQR--------------KFEGSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQNKEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPDWRFDFE 656
            +QA+ WW       G QW  +EH G+SFP+ Y PHGV ++YDG+E+ LSP +EE ATFFA +  DG  LG+  TA +F  NFF+D+++ + T H +K+ K  KCDF  +R HL ++++IKKA TD ER   K ++      FG AIVDGH+EKVGN+ MEPPG FRGRG+HPK GKLK+R  P +V +N+ E ++VP C VPG AWG+V+HDP V WLS WKENINN  KY  L+A SSFKGKSD  KYNKA  L  +ID IR +Y++ L + + E +QL TAMW+ID+LALRVGGEK  DE ADTVGCC+LRVEH+ F P G      E+ELEFLGKDSMLFKQ IDF A  Y D   +G+ V+ N   FCK +KP++ VF  + PT LN HL+ +M GL+AKVFRTYNAS+TLQ +L   + L   K +T   KVVEYNNANREVAILCNHQR+VS A     EN+G ++AK+KEQ+  LKA LK    G+ K IP+K                 +   + A  +EEK E T+               KF  +H++   P+ +Q+ ++I  WT K+ KME+DL+ K+ NKEVSLGTSKINYMDPRISVAWCKRNEVPIE+IF+KTLRDKF WAM VPPDW F+ E
Sbjct:   83 MQAFLWWNASEPPEGCQWDTMEHAGVSFPEPYVPHGVKMLYDGKEVYLSPVEEEAATFFAAMDPDGMHLGNPKTAPIFIKNFFADFRKILGTKHVIKDYK--KCDFEPIRVHLNEQKIIKKAITDEERKMNKDQRNEAMFKFGYAIVDGHIEKVGNYNMEPPGAFRGRGEHPKMGKLKQRVAPEQVQLNMSECSRVPPCIVPGHAWGDVRHDPQVQWLSQWKENINNQVKYMQLAAQSSFKGKSDRSKYNKAALLCENIDKIRDSYKKKLKSKSLETKQLGTAMWVIDRLALRVGGEKDTDEEADTVGCCSLRVEHLHFDPNGEGGDNCEIELEFLGKDSMLFKQTIDFGAAMYNDDNGMGTTVYQNFKTFCKKKKPSQDVFDSLTPTALNAHLKEIMEGLTAKVFRTYNASKTLQDELRKTEDLVSWKRLTAAEKVVEYNNANREVAILCNHQRSVSKAQETQLENIGAKLAKLKEQKKVLKAILKRLNKGETKGIPIKKNEKKMVEAANNAVAKAKKMKEKAKTNEEKIEATEADQAAKQQKRDAADYKFTQAHLWEKVPTADQVIKRITAWTAKISKMEMDLKHKDDNKEVSLGTSKINYMDPRISVAWCKRNEVPIEKIFSKTLRDKFNWAMAVPPDWEFNAE 727          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|169920 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C9X0_9STRA0.000e+0100.00DNA topoisomerase I n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2WTQ7_9STRA6.390e-24356.49Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3XV41_HETAK2.220e-24154.10Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9D5J1_9STRA6.370e-23556.68TOPEUc domain-containing protein n=2 Tax=Monodopsi... [more]
B5Y3I3_PHATC1.300e-22955.77Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A7R9YDN3_9STRA1.300e-22854.03Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S3PD47_9STRA1.260e-22752.86Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2CY07_9STRA1.670e-22754.32Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2YPG0_9STRA7.280e-22753.70Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S4VCD4_9STRA1.480e-22554.10Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 573..600
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 536..561
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 664..702
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 671..688
NoneNo IPR availablePANTHERPTHR10290:SF3DNA TOPOISOMERASE 1coord: 55..653
NoneNo IPR availablePANTHERPTHR10290DNA TOPOISOMERASE Icoord: 55..653
IPR001631DNA topoisomerase IPRINTSPR00416EUTPISMRASEIcoord: 442..456
score: 74.52
coord: 331..350
score: 58.75
coord: 354..368
score: 70.0
coord: 378..394
score: 36.13
coord: 606..617
score: 71.43
coord: 216..225
score: 68.93
IPR013499DNA topoisomerase I, eukaryotic-typeSMARTSM00435topeucoord: 216..626
e-value: 3.3E-188
score: 641.2
IPR013034DNA topoisomerase I, DNA binding, N-terminal domain 1GENE3D1.10.10.41coord: 85..175
e-value: 1.2E-77
score: 262.3
IPR013500DNA topoisomerase I, catalytic core, eukaryotic-typePFAMPF01028Topoisom_Icoord: 289..523
e-value: 3.5E-85
score: 284.9
IPR013500DNA topoisomerase I, catalytic core, eukaryotic-typeCDDcd00659Topo_IB_Ccoord: 295..497
e-value: 7.11099E-66
score: 214.448
IPR014711DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-typeGENE3D3.90.15.10Topoisomerase I; Chain A, domain 3coord: 289..445
e-value: 2.7E-52
score: 178.9
IPR025834Topoisomerase I C-terminal domainPFAMPF14370Topo_C_assoccoord: 585..653
e-value: 1.6E-34
score: 117.6
IPR013030DNA topoisomerase I, DNA binding, N-terminal domain 2GENE3D2.170.11.10DNA Topoisomerase I, domain 2coord: 57..286
e-value: 1.2E-77
score: 262.3
IPR008336DNA topoisomerase I, DNA binding, eukaryotic-typePFAMPF02919Topoisom_I_Ncoord: 69..286
e-value: 4.6E-74
score: 248.5
IPR014727DNA topoisomerase I, catalytic core, alpha/beta subdomainGENE3D1.10.132.10coord: 446..653
e-value: 3.5E-60
score: 204.8
IPR036202DNA topoisomerase I, DNA binding, eukaryotic-type, N-terminal domain superfamilySUPERFAMILY56741Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragmentcoord: 55..287
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 289..651

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_68contigContig_68:301585..310926 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169920mRNA_8482Tribonema minus UTEX_B_3156 mRNAContig_68 301585..310926 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|169920|e_gw1.68.95.1 ID=Trimin1|169920|e_gw1.68.95.1|Name=jgi.p|Trimin1|169920|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=703bp
MPAPSACPSACGTPAPQTIYLLSQGHTAQPPPVPLPPRAPLLPLPLLPLP
LVLQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMEL
SPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKN
AKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVD
GHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVNIGEEAKVPQ
CPVPGFAWGNVQHDPGVAWLSTWKENINNMNKYAMLSASSSFKGKSDMEK
YNKAMRLKGHIDAIRRNYERGLNASTSEMRQLATAMWLIDKLALRVGGEK
GEDEADTVGCCTLRVEHMTFGPAGTREMELEFLGKDSMLFKQNIDFTAYG
DIGSKVFDNLTAFCKGRKPAEQVFQKIDPTTLNKHLQSLMPGLSAKVFRT
YNASETLQQQLPSADALKNMTVQAKVVEYNNANREVAILCNHQRTVSGAM
LKSFENLGERVAKVKEQRADLKAWLKLAKDGKAKKIPLKGRGSSQDADDD
EEKKELTQRKFEGSHMFANTPSEEQLQRKIEGWTTKLKKMEVDLRDKEQN
KEVSLGTSKINYMDPRISVAWCKRNEVPIERIFAKTLRDKFVWAMNVPPD
WRFDFETLRAVTAESSDEPKAVTAVADDADAKAKGKGDDDEEEEEEEEEE
MD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001631TopoI
IPR013499TopoI_euk
IPR013034DNA_topo_DNA_db_N_dom1
IPR013500TopoI_cat_euk
IPR014711TopoI_cat_a-hlx-sub_euk
IPR025834TopoI_C_dom
IPR013030DNA_topo_DNA_db_N_dom2
IPR008336TopoI_DNA-bd_euk
IPR014727TopoI_cat_a/b-sub_euk
IPR036202TopoI_DNA-bd_euk_N_sf
IPR011010DNA_brk_join_enz