Trimin1|169911|e_gw1.67.120.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|169911
Unique NameTrimin1|169911|e_gw1.67.120.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length235
Homology
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BLAST of jgi.p|Trimin1|169911 vs. uniprot
Match: A0A835YPQ2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPQ2_9STRA)

HSP 1 Score: 452 bits (1164), Expect = 1.110e-160
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0 
Query:    1 RQVKRSLRFSKWVLLPVSILLVVCSWVSAGLLTTVGLVAADICVDPRQNIVRAFTNDVIADTARYYVTCDGTNVFAQLIEQGFLFTFIAKGELNSADFKDYAQQCPALAPAKDRVAAALANIKDETGYLSKEIRCREINPMYVQGVEGAICTSGTQDILMAMVGFVLVGIFLALVSTCFIWLMRHVGYAESDRLGIDFNSSKLLQRKTSTMALPPHTAHSRHVSAAETGVSSRR 234
            RQVKRSLRFSKWVLLPVSILLVVCSWVSAGLLTTVGLVAADICVDPRQNIVRAFTNDVIADTARYYVTCDGTNVFAQLIEQGFLFTFIAKGELNSADFKDYAQQCPALAPAKDRVAAALANIKDETGYLSKEIRCREINPMYVQGVEGAICTSGTQDILMAMVGFVLVGIFLALVSTCFIWLMRHVGYAESDRLGIDFNSSKLLQRKTSTMALPPHTAHSRHVSAAETGVSSRR
Sbjct:    1 RQVKRSLRFSKWVLLPVSILLVVCSWVSAGLLTTVGLVAADICVDPRQNIVRAFTNDVIADTARYYVTCDGTNVFAQLIEQGFLFTFIAKGELNSADFKDYAQQCPALAPAKDRVAAALANIKDETGYLSKEIRCREINPMYVQGVEGAICTSGTQDILMAMVGFVLVGIFLALVSTCFIWLMRHVGYAESDRLGIDFNSSKLLQRKTSTMALPPHTAHSRHVSAAETGVSSRR 234
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|169911 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YPQ2_9STRA1.110e-160100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006990TweetyPFAMPF04906Tweetycoord: 8..177
e-value: 1.0E-13
score: 50.7
IPR006990TweetyPANTHERPTHR12424TWEETY-RELATEDcoord: 9..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_67contigContig_67:486136..487988 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169911mRNA_10388Tribonema minus UTEX_B_3156 mRNAContig_67 486136..487988 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|169911|e_gw1.67.120.1 ID=Trimin1|169911|e_gw1.67.120.1|Name=jgi.p|Trimin1|169911|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=235bp
RQVKRSLRFSKWVLLPVSILLVVCSWVSAGLLTTVGLVAADICVDPRQNI
VRAFTNDVIADTARYYVTCDGTNVFAQLIEQGFLFTFIAKGELNSADFKD
YAQQCPALAPAKDRVAAALANIKDETGYLSKEIRCREINPMYVQGVEGAI
CTSGTQDILMAMVGFVLVGIFLALVSTCFIWLMRHVGYAESDRLGIDFNS
SKLLQRKTSTMALPPHTAHSRHVSAAETGVSSRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006990Tweety