Trimin1|169653|e_gw1.66.25.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|169653
Unique NameTrimin1|169653|e_gw1.66.25.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length284
Homology
BLAST of jgi.p|Trimin1|169653 vs. uniprot
Match: A0A835YLY5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY5_9STRA)

HSP 1 Score: 456 bits (1174), Expect = 1.400e-160
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0
Query:    1 RKVKILMLGDTGVGKSSLMNRFTEDEFFPGLVGTVGVDFKMRTLDLRGERVLVQVWDTAGQERFHKITRAYYRGSHGILLAYDVGEPATLENISYWINNIQDNASSGVCTCLVGNKMDLRGETAAXXXXXXXXXXXXXXXXXXANPLSCCVSASPKAAPVGTDSGRAIAQQYGVAFFETSAKTGHNVHAAFVSLVESALEAADAGCGPPTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLRTGVCPCAMWCCRALLGARCVARVCSQPHLVTWSSTIF 283
            RKVKILMLGDTGVGKSSLMNRFTEDEFFPGLVGTVGVDFKMRTLDLRGERVLVQVWDTAGQERFHKITRAYYRGSHGILLAYDVGEPATLENISYWINNIQDNASSGVCTCLVGNKMDLRGETAAXXXXXXXXXXXXXXXXXXANPLSCCVSASPKAAPVGTDSGRAIAQQYGVAFFETSAKTGHNVHAAFVSLVESALEAADAGCGPPTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLRTGVCPCAMWCCRALLGARCVARVCSQPHLVTWSSTIF
Sbjct:    1 RKVKILMLGDTGVGKSSLMNRFTEDEFFPGLVGTVGVDFKMRTLDLRGERVLVQVWDTAGQERFHKITRAYYRGSHGILLAYDVGEPATLENISYWINNIQDNASSGVCTCLVGNKMDLRGETAAXXXXXXXXXXXXXXXXXXANPLSCCVSASPKAAPVGTDSGRAIAQQYGVAFFETSAKTGHNVHAAFVSLVESALEAADAGCGPPTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLRTGVCPCAMWCCRALLGARCVARVCSQPHLVTWSSTIF 283          
BLAST of jgi.p|Trimin1|169653 vs. uniprot
Match: H6WB87_VAULI (Rab8 family GTPase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB87_VAULI)

HSP 1 Score: 232 bits (591), Expect = 1.470e-69
Identity = 124/210 (59.05%), Postives = 149/210 (70.95%), Query Frame = 0
Query:    1 RKVKILMLGDTGVGKSSLMNRFTEDEFFPGLVGTVGVDFKMRTLDLRGERVLVQVWDTAGQERFHKITRAYYRGSHGILLAYDVGEPATLENISYWINNIQDNASSGVCTCLVGNKMDLRGETAAXXXXXXXXXXXXXXXXXXANPLSCCVSASPKAA-----------PVGTDSGRAIAQQYGVAFFETSAKTGHNVHAAFVSLVESAL 199
            RK+KILMLGDTGVGKSSL+ RFT+D F  G+VGTVGVDFK+RT+++ GE++ VQVWDTAGQERFHKITRAYY G  GILLAYDVGEP TLENISYWI NI+DNAS  V TCLVGNK DL+    +                     L+ CVSASP+ +            V T+SG+ IA++YGV FFE SAKTG+NV+ AF+SL+E  +
Sbjct:  254 RKIKILMLGDTGVGKSSLIQRFTDDTFHAGMVGTVGVDFKIRTMEVLGEKITVQVWDTAGQERFHKITRAYYHGCQGILLAYDVGEPGTLENISYWIKNIRDNASKDVRTCLVGNKADLKVRAISPYQ------------------LNWCVSASPQGSGRKRSWECPPVQVETESGQQIAEEYGVNFFEASAKTGYNVNEAFLSLLEGVV 445          
BLAST of jgi.p|Trimin1|169653 vs. uniprot
Match: D8LMQ2_ECTSI (Rab8E, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ2_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 1.030e-47
Identity = 98/202 (48.51%), Postives = 127/202 (62.87%), Query Frame = 0
Query:    1 RKVKILMLGDTGVGKSSLMNRFTEDEFFPGLVGTVGVDFKMRTLDLRGERVLVQVWDTAGQERFHKITRAYYRGSHGILLAYDVGEPATLENISYWINNIQDNASSG-VCTCLVGNKMDLRGETAAXXXXXXXXXXXXXXXXXXANPLSCCVSASPKAAPVGTDSGRAIAQQYGVAFFETSAKTGHNVHAAFVSLVESALEA 201
            RK+K+LMLGD+GVGKSSLM+RF ED F    V T+GVDFK++T+ L  E V +QVWDTAGQ++FHKIT+AYYRGSHGI+L YD+ +P TL+N +YW+ +I+D A S  V  CLVGNK+DLR E                                  A  V T +GR +A+++G  +FE SAKTG  V  AF++    A EA
Sbjct:   52 RKIKLLMLGDSGVGKSSLMDRFMEDYFSITKVQTLGVDFKLKTIVLNDEEVDLQVWDTAGQQKFHKITQAYYRGSHGIVLVYDMSDPKTLDNTAYWMRSIRDTAGSNRVQICLVGNKVDLREEVGLEGQQQDL------------------------AGMVETSTGRKVAEEFGAEYFECSAKTGCMVEEAFIATATKAYEA 229          
BLAST of jgi.p|Trimin1|169653 vs. uniprot
Match: A0A6H5KJK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK4_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 1.390e-46
Identity = 96/202 (47.52%), Postives = 126/202 (62.38%), Query Frame = 0
Query:    1 RKVKILMLGDTGVGKSSLMNRFTEDEFFPGLVGTVGVDFKMRTLDLRGERVLVQVWDTAGQERFHKITRAYYRGSHGILLAYDVGEPATLENISYWINNIQDNASSG-VCTCLVGNKMDLRGETAAXXXXXXXXXXXXXXXXXXANPLSCCVSASPKAAPVGTDSGRAIAQQYGVAFFETSAKTGHNVHAAFVSLVESALEA 201
            RK+K+LMLGD+GVGKSSLM+RF ED F    V T+GVDFK++T+ L  E V +QVWDTAGQ++FHKIT+AYYRGSHGI+L YD+ +P TL+N +YW+ +I+D A S  V  CL+GNK+DLR E                                     V T +GR +A+++G  +FE SAKTG  V  AF++    A EA
Sbjct:  942 RKIKLLMLGDSGVGKSSLMDRFMEDYFSITKVQTLGVDFKLKTIFLNDEEVDLQVWDTAGQQKFHKITQAYYRGSHGIVLVYDISDPKTLDNTAYWMRSIRDTAGSNRVQICLIGNKVDLREEVGREEQQQDLSGM------------------------VETSTGRKVAEEFGAEYFECSAKTGCMVEEAFIATATKAYEA 1119          
BLAST of jgi.p|Trimin1|169653 vs. uniprot
Match: A0A836C8W2_9STRA (Ras family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8W2_9STRA)

HSP 1 Score: 164 bits (416), Expect = 3.160e-46
Identity = 87/205 (42.44%), Postives = 120/205 (58.54%), Query Frame = 0
Query:    3 VKILMLGDTGVGKSSLMNRFTEDEFFPGLVGTVGVDFKMRTLDLRGERVLVQVWDTAGQERFHKITRAYYRGSHGILLAYDVGEPATLENISYWINNIQDNASS----GVCTCLVGNKMDLRGETAAXXXXXXXXXXXXXXXXXXANPLSCCVSASPKAAPVGTDSGRAIAQQYGVAFFETSAKTGHNVHAAFVSLVESALEAAD 203
            ++IL+LGD+GVGK+SLM R+TED F P L+ T GVDFK+R LD+ G RV  Q+WDTAGQE+FH ITRAYYRG+HGI L YDV +  + +N++YW+ NIQ +A +    G+C  L+GNK+DL  E                                     V + +G  + +++GV +FE SAK G  V  AF +L    +E  +
Sbjct:    3 IRILLLGDSGVGKTSLMLRYTEDHFSPNLLSTAGVDFKVRHLDINGRRVRCQIWDTAGQEKFHVITRAYYRGAHGIALVYDVADADSFKNVNYWVANIQTHAPAAGREGICKVLLGNKVDLPAEHRE----------------------------------VSSAAGNEVGEEFGVRYFEVSAKDGTGVQDAFDTLAREIVEGLE 173          
BLAST of jgi.p|Trimin1|169653 vs. uniprot
Match: A0A6P6SVL0_COFAR (ras-related protein RABE1a-like n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6SVL0_COFAR)

HSP 1 Score: 162 bits (411), Expect = 7.640e-46
Identity = 87/192 (45.31%), Postives = 116/192 (60.42%), Query Frame = 0
Query:    3 VKILMLGDTGVGKSSLMNRFTEDEFFPGLVGTVGVDFKMRTLDLRGERVLVQVWDTAGQERFHKITRAYYRGSHGILLAYDVGEPATLENISYWINNIQDNASSGVCTCLVGNKMDLRGETAAXXXXXXXXXXXXXXXXXXANPLSCCVSASPKAAPVGTDSGRAIAQQYGVAFFETSAKTGHNVHAAFVSL 194
            VK+L++GD+GVGKS ++ RF ED F    + T+G+D K+RT++L G+R+ +Q+WDTAGQERF  IT AYYRG+ GILL YDV + ++  NI  WI NI+ +AS  V T LVGNK D+                                  S +A P  T  G+A+A +YGV FFETSAKT HNV+  F S+
Sbjct:   16 VKLLLIGDSGVGKSCILLRFCEDSFTTSFISTIGIDLKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNTILVGNKADM--------------------------------DESKRAVP--TSRGQALANEYGVKFFETSAKTNHNVNEVFFSI 173          
BLAST of jgi.p|Trimin1|169653 vs. uniprot
Match: A0A482RSH1_9ARCH (GTP-binding protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSH1_9ARCH)

HSP 1 Score: 165 bits (417), Expect = 8.880e-46
Identity = 91/201 (45.27%), Postives = 121/201 (60.20%), Query Frame = 0
Query:    1 RKVKILMLGDTGVGKSSLMNRFTEDEFFPGLVGTVGVDFKMRTLDLRGERVLVQVWDTAGQERFHKITRAYYRGSHGILLAYDVGEPATLENISYWINNIQDNASSGVCTCLVGNKMDLRGETAAXXXXXXXXXXXXXXXXXXANPLSCCVSASPKAAPVGTDSGRAIAQQYGVAFFETSAKTGHNVHAAFVSLVESALEA 201
            R+VKIL+LGD+GVGKSSL+ R+T D F P L  TVGV+FK + +  +GE + VQVWDTAGQE+FHKIT +YY+G+ GI+L YDV +  +L N+ YWI NI+ +AS  V   LVGNK+DLR                                A P    +  + G+ I+ ++GV FFETSAK   NV  AF++LV    +A
Sbjct:   51 RRVKILLLGDSGVGKSSLIVRWTHDTFSPSLASTVGVNFKNKKIAYKGECLQVQVWDTAGQEQFHKITTSYYKGAQGIMLVYDVADANSLANVEYWIKNIKTHASDSVHVVLVGNKIDLR-------------------------------HADPDKKYIDMNRGKEISHKFGVPFFETSAKDSSNVEHAFMTLVGDIADA 220          
BLAST of jgi.p|Trimin1|169653 vs. uniprot
Match: C1E6E1_MICCC (Ras-related gtp-binding protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E6E1_MICCC)

HSP 1 Score: 162 bits (409), Expect = 9.750e-46
Identity = 84/208 (40.38%), Postives = 124/208 (59.62%), Query Frame = 0
Query:    3 VKILMLGDTGVGKSSLMNRFTEDEFFPGLVGTVGVDFKMRTLDLRGERVLVQVWDTAGQERFHKITRAYYRGSHGILLAYDVGEPATLENISYWINNIQDNASSGVCTCLVGNKMDLRGETAAXXXXXXXXXXXXXXXXXXANPLSCCVSASPKAAPVGTDSGRAIAQQYGVAFFETSAKTGHNVHAAFVSL---VESALEAADAGCG 207
            +K+L++GD+GVGKS L+ RF+ED+F    + T+G+DFK+RT++L G+RV +Q+WDTAGQERF  IT AYYRG+HGILL YDV +  +  N+  W+ NI+ +AS GV   LVGNK D   +                                     + T+ G A+A+++G+ FFETSAK   NV+ AF ++   +++ L+ +  G G
Sbjct:   12 IKLLLIGDSGVGKSCLLLRFSEDQFTSSFITTIGIDFKIRTVELDGKRVKLQIWDTAGQERFRTITNAYYRGAHGILLTYDVTDEGSFNNVRNWMRNIEQHASDGVSKVLVGNKSDAEEKRV-----------------------------------ISTEQGEALAKEFGIPFFETSAKANTNVNDAFFAIARIIKAGLKTSGDGGG 184          
BLAST of jgi.p|Trimin1|169653 vs. uniprot
Match: UPI0009017E4D (ras-related protein RABE1c-like n=2 Tax=Ipomoea TaxID=4119 RepID=UPI0009017E4D)

HSP 1 Score: 161 bits (407), Expect = 2.540e-45
Identity = 89/211 (42.18%), Postives = 125/211 (59.24%), Query Frame = 0
Query:    3 VKILMLGDTGVGKSSLMNRFTEDEFFPGLVGTVGVDFKMRTLDLRGERVLVQVWDTAGQERFHKITRAYYRGSHGILLAYDVGEPATLENISYWINNIQDNASSGVCTCLVGNKMDLRGETAAXXXXXXXXXXXXXXXXXXANPLSCCVSASPKAAPVGTDSGRAIAQQYGVAFFETSAKTGHNVHAAFVSL---VESALEAADAGCGPPT 210
            +K+L++GD+GVGKS L+ RF+ED F    + T+G+DFK+RT++L G+R+ +Q+WDTAGQERF  IT AYYRG+ GILL YDV + ++ +NI  W+ NI+ +AS  V   L+GNK D+                                  S K  P  T  G+A+A +YGV FFETSAKTG+NV   F ++   ++  L  AD+   P T
Sbjct:   11 IKLLLIGDSGVGKSCLLLRFSEDSFTQSYITTIGIDFKVRTIELDGKRMKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFDNIRNWMKNIEQHASDTVNKILIGNKADM--------------------------------DESKKVVP--TSRGQALADEYGVKFFETSAKTGYNVEQGFFAIAGDIKQRLAEADSKAEPST 187          
BLAST of jgi.p|Trimin1|169653 vs. uniprot
Match: A0A1E3QB79_LIPST (Uncharacterized protein n=1 Tax=Lipomyces starkeyi NRRL Y-11557 TaxID=675824 RepID=A0A1E3QB79_LIPST)

HSP 1 Score: 160 bits (406), Expect = 2.750e-45
Identity = 85/206 (41.26%), Postives = 116/206 (56.31%), Query Frame = 0
Query:    3 VKILMLGDTGVGKSSLMNRFTEDEFFPGLVGTVGVDFKMRTLDLRGERVLVQVWDTAGQERFHKITRAYYRGSHGILLAYDVGEPATLENISYWINNIQDNASSGVCTCLVGNKMDLRGETAAXXXXXXXXXXXXXXXXXXANPLSCCVSASPKAAPVGTDSGRAIAQQYGVAFFETSAKTGHNVHAAFVSLVESALEAADAGCGP 208
            +K+L++GD+GVGKS L+ RF+ED F P  + T+G+DFK+RT+DL G+R+ +Q+WDTAGQERF  IT AYYRG+ GILL YDV +  +  NI  W +N++ +AS GV   L+GNK D   + A                                   V T+ G+A+A + G+ F E SAK   NV  AFVSL     +  D    P
Sbjct:   11 IKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIDLDGKRIKMQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRNWFSNVEQHASEGVNKLLIGNKCDWEEKRA-----------------------------------VSTEQGKALANELGIPFIEASAKANINVEEAFVSLARQIKQRVDLASEP 181          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|169653 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YLY5_9STRA1.400e-160100.00P-loop containing nucleoside triphosphate hydrolas... [more]
H6WB87_VAULI1.470e-6959.05Rab8 family GTPase n=1 Tax=Vaucheria litorea TaxID... [more]
D8LMQ2_ECTSI1.030e-4748.51Rab8E, RAB family GTPase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KJK4_9PHAE1.390e-4647.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C8W2_9STRA3.160e-4642.44Ras family-domain-containing protein n=1 Tax=Tribo... [more]
A0A6P6SVL0_COFAR7.640e-4645.31ras-related protein RABE1a-like n=3 Tax=Coffea Tax... [more]
A0A482RSH1_9ARCH8.880e-4645.27GTP-binding protein n=1 Tax=archaeon TaxID=1906665... [more]
C1E6E1_MICCC9.750e-4640.38Ras-related gtp-binding protein n=1 Tax=Micromonas... [more]
UPI0009017E4D2.540e-4542.18ras-related protein RABE1c-like n=2 Tax=Ipomoea Ta... [more]
A0A1E3QB79_LIPST2.750e-4541.26Uncharacterized protein n=1 Tax=Lipomyces starkeyi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 3..24
score: 45.55
coord: 106..119
score: 47.78
coord: 26..42
score: 29.23
coord: 44..66
score: 42.92
coord: 176..198
score: 41.2
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 3..201
e-value: 2.3E-63
score: 226.5
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 1..201
e-value: 5.4E-11
score: 39.1
NoneNo IPR availablePIRSRPIRSR006809-1PIRSR006809-1coord: 5..127
e-value: 0.0021
score: 14.8
NoneNo IPR availablePIRSRPIRSR006809-2PIRSR006809-2coord: 5..127
e-value: 0.0021
score: 14.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..240
NoneNo IPR availablePANTHERPTHR47977LD21953P-RELATEDcoord: 3..199
NoneNo IPR availablePROSITEPS51419RABcoord: 1..250
score: 27.654907
NoneNo IPR availablePROSITEPS51420RHOcoord: 1..202
score: 9.952238
NoneNo IPR availableCDDcd00154Rabcoord: 3..196
e-value: 8.10602E-69
score: 208.464
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 5..201
e-value: 1.2E-11
score: 29.5
IPR001806Small GTPasePFAMPF00071Rascoord: 4..198
e-value: 2.8E-49
score: 166.8
IPR001806Small GTPasePROSITEPS51421RAScoord: 1..261
score: 14.120702
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 2..126
e-value: 3.8E-24
score: 83.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..218
e-value: 8.2E-57
score: 193.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_66contigContig_66:72536..74829 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169653mRNA_9640Tribonema minus UTEX_B_3156 mRNAContig_66 72536..74829 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|169653|e_gw1.66.25.1 ID=Trimin1|169653|e_gw1.66.25.1|Name=jgi.p|Trimin1|169653|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=284bp
RKVKILMLGDTGVGKSSLMNRFTEDEFFPGLVGTVGVDFKMRTLDLRGER
VLVQVWDTAGQERFHKITRAYYRGSHGILLAYDVGEPATLENISYWINNI
QDNASSGVCTCLVGNKMDLRGETAAAAASDNSADAAAAPPPPAANPLSCC
VSASPKAAPVGTDSGRAIAQQYGVAFFETSAKTGHNVHAAFVSLVESALE
AADAGCGPPTTPASQQRRRGARRGGSGGAGAGGDRAHSTPPPSSLRTGVC
PCAMWCCRALLGARCVARVCSQPHLVTWSSTIF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase