Trimin1|169642|e_gw1.66.151.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|169642
Unique Name	Trimin1\|169642\|e_gw1.66.151.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	118

Homology

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BLAST of jgi.p|Trimin1|169642 vs. uniprot
Match: A0A835YPY0_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPY0_9STRA)

HSP 1 Score: 248 bits (632), Expect = 2.150e-83
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0

Query:    1 MEAPDVIKWTSSGQAFGIQDMATFRTVILPKHFKHDKFSSFQRQLNLYGFRKIVRGRESGGYMHKDFQRGRLDLLKHVKRGYMPPCPPEYEKKIYGSGARGEDSEADSDPELIPPPRG 118
            MEAPDVIKWTSSGQAFGIQDMATFRTVILPKHFKHDKFSSFQRQLNLYGFRKIVRGRESGGYMHKDFQRGRLDLLKHVKRGYMPPCPPEYEKKIYGSGARGEDSEADSDPELIPPPRG
Sbjct:    1 MEAPDVIKWTSSGQAFGIQDMATFRTVILPKHFKHDKFSSFQRQLNLYGFRKIVRGRESGGYMHKDFQRGRLDLLKHVKRGYMPPCPPEYEKKIYGSGARGEDSEADSDPELIPPPRG 118

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BLAST of jgi.p|Trimin1|169642 vs. uniprot
Match: A0A835Z533_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z533_9STRA)

HSP 1 Score: 181 bits (458), Expect = 5.760e-57
Identity = 80/98 (81.63%), Postives = 91/98 (92.86%), Query Frame = 0

Query:    1 MEAPDVIKWTSSGQAFGIQDMATFRTVILPKHFKHDKFSSFQRQLNLYGFRKIVRGRESGGYMHKDFQRGRLDLLKHVKRGYMPPCPPEYEKKIYGSG 98
            +EAP+VI WTS+G+AFGIQDM  FRT +LP HFKHDKFSSFQRQLNLYGFRKIVRG+E+GGYMHKDFQRGR DLL HV+RG+MPPCPP+YE+KIYGSG
Sbjct:   12 VEAPEVITWTSTGRAFGIQDMPRFRTQVLPTHFKHDKFSSFQRQLNLYGFRKIVRGKEAGGYMHKDFQRGRADLLPHVRRGHMPPCPPQYERKIYGSG 109

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BLAST of jgi.p|Trimin1|169642 vs. uniprot
Match: A0A835YN41_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN41_9STRA)

HSP 1 Score: 155 bits (392), Expect = 8.150e-45
Identity = 74/125 (59.20%), Postives = 95/125 (76.00%), Query Frame = 0

Query:    2 EAPDVIKWTSSGQAFGIQDMATFRTVILPKHFKHDKFSSFQRQLNLYGFRKIVRGRESGGYMHKDFQRGRLDLLKHVKRGYMPPCPPEYEKKIYGSG--------------ARGEDSEADSDPEL 112
            E+P++I W+S+G+AFGI++MA F+T ILP++FKHDKFSSFQRQLNLYGFRKIV+GRESG Y+H  FQRG  +LLK V+RG +PPCPP YE+K+YG                AR  DS +DS+PE+
Sbjct:   35 ESPEIITWSSTGRAFGIRNMAAFKTKILPQYFKHDKFSSFQRQLNLYGFRKIVKGRESGCYIHCYFQRGHPELLKQVRRGQVPPCPPRYERKVYGCSTRPRQGAGSALDGTARTSDSSSDSEPEM 159

[Close]

BLAST of jgi.p|Trimin1|169642 vs. uniprot
Match: A0A6H5L4Y2_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y2_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 6.830e-43
Identity = 75/119 (63.03%), Postives = 89/119 (74.79%), Query Frame = 0

Query:    2 EAPDVIKWTSSGQAFGIQDMATFRTVILPKHFKHDKFSSFQRQLNLYGFRKIVRGRESGGYMHKDFQRGRLDLLKHVKRGYMPPCPPEYEKKIYGSGAR--GEDSEADSDPELIPPPRG 118
            EA  ++ WTS+G AFGI D A F   +L  +FKH+KFSSFQRQLNLYGFRKIV+GRESG YMH  F R R DLL  V+RG +PPCPPEY +K+YGSG R   +D E DS+PEL+ P RG
Sbjct:   18 EASAIVTWTSTGTAFGILDNAAFGQDVLSSYFKHNKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPDLLSEVRRGIVPPCPPEYTRKVYGSGPRFMNQDDETDSEPELVIPSRG 136

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BLAST of jgi.p|Trimin1|169642 vs. uniprot
Match: D7FI12_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI12_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 1.070e-42
Identity = 74/119 (62.18%), Postives = 89/119 (74.79%), Query Frame = 0

Query:    2 EAPDVIKWTSSGQAFGIQDMATFRTVILPKHFKHDKFSSFQRQLNLYGFRKIVRGRESGGYMHKDFQRGRLDLLKHVKRGYMPPCPPEYEKKIYGSGAR--GEDSEADSDPELIPPPRG 118
            EA  ++ WTS+G AFGI D A F   +L  +FKH+KFSSFQRQLNLYGFRKIV+GRESG YMH  F R R +LL  V+RG +PPCPPEY +K+YGSG R   +D E DS+PEL+ P RG
Sbjct:   37 EASAIVTWTSTGTAFGILDNAAFGQDVLSSYFKHNKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPELLSEVRRGVVPPCPPEYTRKVYGSGPRFMNQDDETDSEPELVIPSRG 155

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BLAST of jgi.p|Trimin1|169642 vs. uniprot
Match: A0A835Z0U6_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0U6_9STRA)

HSP 1 Score: 142 bits (358), Expect = 9.910e-42
Identity = 63/96 (65.62%), Postives = 79/96 (82.29%), Query Frame = 0

Query:    2 EAPDVIKWTSSGQAFGIQDMATFRTVILPKHFKHDKFSSFQRQLNLYGFRKIVRGRESGGYMHKDFQRGRLDLLKHVKRGYMPPCPPEYEKKIYGS 97
            E+ D+I W+ SG++FGI++M  F+  ILP++FKHDKFSSFQRQLNLYGFRKIV+G ESG Y+H  F+RG  +LLK V+RG MPPCPP YE K+YGS
Sbjct:   15 ESADIIGWSQSGRSFGIREMNAFKDQILPQYFKHDKFSSFQRQLNLYGFRKIVKGNESGCYIHTYFRRGHPELLKQVRRGQMPPCPPRYEHKVYGS 110

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BLAST of jgi.p|Trimin1|169642 vs. uniprot
Match: A0A6H5KNL3_9PHAE (HSF_DOMAIN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNL3_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 6.210e-39
Identity = 71/119 (59.66%), Postives = 90/119 (75.63%), Query Frame = 0

Query:    2 EAPDVIKWTSSGQAFGIQDMATFRTVILPKHFKHDKFSSFQRQLNLYGFRKIVRGRESGGYMHKDFQRGRLDLLKHVKRGYMPPCPPEYEKKIYGSGAR--GEDSEADSDPELIPPPRG 118
            E+P ++ WTS+G AFGI+DMA+FR  +L  +FKH+KFSSFQRQLNLYGFRK+V+GRESG YMH  F R   + L  VKRG +PPCPP Y +KIYGSG R   ++  +DS+PEL+   RG
Sbjct:   18 ESPSIVMWTSTGTAFGIRDMASFRQDVLTCYFKHNKFSSFQRQLNLYGFRKVVKGRESGCYMHPSFLRDSPEKLTEVKRGVVPPCPPCYSRKIYGSGPRFMSQEEGSDSEPELVVQARG 136

[Close]

BLAST of jgi.p|Trimin1|169642 vs. uniprot
Match: D8LU68_ECTSI (Heat Shock transcription factor (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU68_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 5.030e-28
Identity = 53/97 (54.64%), Postives = 70/97 (72.16%), Query Frame = 0

Query:    2 EAPDVIKWTSSGQAFGIQDMATFRTVILPKHFKHDKFSSFQRQLNLYGFRKIVRGRESGGYMHKDFQRGRLDLLKHVKRGYMPPCPPEYEKKIYGSG 98
            E P VI W++SG+AF I D   F   I+P+ FK +K+SSFQRQLNLYGFRK+VRG E+GGYMH  F+RG+ + L  V+RG+ P  PPE+   ++G G
Sbjct:   63 EDPKVIGWSASGKAFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHGHG 159

[Close]

BLAST of jgi.p|Trimin1|169642 vs. uniprot
Match: A0A6H5JLW3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW3_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 1.250e-25
Identity = 53/103 (51.46%), Postives = 70/103 (67.96%), Query Frame = 0

Query:    2 EAPDVIKWTSSGQAFGIQDMATFRTVILPKHFKHDKFSSFQRQLNLYGFRKIVRGRESGGYMHKDFQRGRLDLLKHVKRGYMPP------CPPEYEKKIYGSG 98
            E P VI W++SG+AF I D   F   I+P+ FK +K+SSFQRQLNLYGFRK+VRG E+GGYMH  F+RG+ + L  V+RG+ P        PPE+   ++G G
Sbjct:   40 EDPKVIGWSASGKAFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEEEAFPQIPPEFAHDVHGHG 142

[Close]

BLAST of jgi.p|Trimin1|169642 vs. uniprot
Match: A0A6H5JIP5_9PHAE (HSF_DOMAIN domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIP5_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 3.700e-25
Identity = 50/99 (50.51%), Postives = 68/99 (68.69%), Query Frame = 0

Query:    2 EAPDVIKWTSSGQAFGIQDMATFRTVILPKHFKHDKFSSFQRQLNLYGFRKIVRGRESGGYMHKDFQRGRLDLLKHVKRGYMPPCPPEYEKKIYGSGAR 100
            E+ D+I WT SGQAF + D   F   IL K+F+H+KFSSF+RQLNLYG+RK+++G ++G YMH  FQRGR +LL  VK+G +P        +I+G   R
Sbjct:   64 ESSDIITWTKSGQAFQVVDYTRFSEEILLKYFRHNKFSSFRRQLNLYGYRKVIKGPDAGAYMHPFFQRGRPELLGEVKKGKVPHYEMHGVNEIHGQHFR 162

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|169642 vs. uniprot

BLAST of jgi.p|Trimin1|169642 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YPY0_9STRA	2.150e-83	100.00	HSF-type DNA-binding-domain-containing protein n=1...	[more]
A0A835Z533_9STRA	5.760e-57	81.63	HSF-type DNA-binding-domain-containing protein (Fr...	[more]
A0A835YN41_9STRA	8.150e-45	59.20	HSF-type DNA-binding-domain-containing protein n=1...	[more]
A0A6H5L4Y2_9PHAE	6.830e-43	63.03	HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc...	[more]
D7FI12_ECTSI	1.070e-42	62.18	Heat Shock transcription factor n=1 Tax=Ectocarpus...	[more]
A0A835Z0U6_9STRA	9.910e-42	65.63	HSF-type DNA-binding-domain-containing protein (Fr...	[more]
A0A6H5KNL3_9PHAE	6.210e-39	59.66	HSF_DOMAIN domain-containing protein n=2 Tax=Ectoc...	[more]
D8LU68_ECTSI	5.030e-28	54.64	Heat Shock transcription factor (Partial) (Fragmen...	[more]
A0A6H5JLW3_9PHAE	1.250e-25	51.46	HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc...	[more]
A0A6H5JIP5_9PHAE	3.700e-25	50.51	HSF_DOMAIN domain-containing protein (Fragment) n=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PRINTS	PR00056	HSFDOMAIN	coord: 41..53 score: 76.04 coord: 28..40 score: 59.78
IPR000232	Heat shock factor (HSF)-type, DNA-binding	SMART	SM00415	hsfneu3	coord: 2..81 e-value: 6.5E-15 score: 65.6
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PFAM	PF00447	HSF_DNA-bind	coord: 4..80 e-value: 2.1E-22 score: 79.5
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 1..81 e-value: 1.1E-23 score: 85.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..118
None	No IPR available	PANTHER	PTHR10015:SF349	HEAT SHOCK FACTOR PROTEIN	coord: 5..81
IPR027725	Heat shock transcription factor family	PANTHER	PTHR10015	HEAT SHOCK TRANSCRIPTION FACTOR	coord: 5..81
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 5..80

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_66	contig	Contig_66:733786..734336 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|169642	mRNA_9720	Tribonema minus UTEX_B_3156	mRNA	Contig_66 733786..734336 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|169642|e_gw1.66.151.1 ID=Trimin1|169642|e_gw1.66.151.1|Name=jgi.p|Trimin1|169642|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=118bp
MEAPDVIKWTSSGQAFGIQDMATFRTVILPKHFKHDKFSSFQRQLNLYGF
RKIVRGRESGGYMHKDFQRGRLDLLKHVKRGYMPPCPPEYEKKIYGSGAR
GEDSEADSDPELIPPPRG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000232	HSF_DNA-bd
IPR036388	WH-like_DNA-bd_sf
IPR027725	HSF_fam
IPR036390	WH_DNA-bd_sf