Trimin1|169280|e_gw1.62.183.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|169280
Unique NameTrimin1|169280|e_gw1.62.183.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length132
Homology
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BLAST of jgi.p|Trimin1|169280 vs. uniprot
Match: A0A835YMK9_9STRA (EsV-1-7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMK9_9STRA)

HSP 1 Score: 139 bits (349), Expect = 7.550e-40
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 
Query:    1 KQCRVPTCAKLPTFTYPDVGVQWCFKHQKKGMVDVISRRCMHAGRMKIASFGPKGGRRTHC 61
            KQCRVPTCAKLPTFTYPDVGVQWCFKHQKKGMVDVISRRCMHAGRMKIASFGPKGGRRTHC
Sbjct:    1 KQCRVPTCAKLPTFTYPDVGVQWCFKHQKKGMVDVISRRCMHAGRMKIASFGPKGGRRTHC 61
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BLAST of jgi.p|Trimin1|169280 vs. uniprot
Match: A0A835YWI0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWI0_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.640e-7
Identity = 26/61 (42.62%), Postives = 35/61 (57.38%), Query Frame = 0 
Query:    1 KQCRVPTCAKLPTFTYPDVGVQWCFKHQKKGMVDVISRRCMHAGRMKIASFGPKGGRRTHC 61
            K+CR  +C   P F  P  G QWC KH+K GMVDV++ RC     +   SFG +G ++  C
Sbjct:    1 KECREASCTTAPKFNVPGAGGQWCNKHKKVGMVDVLNTRCQCG--LARPSFGLEGDKQPTC 59
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BLAST of jgi.p|Trimin1|169280 vs. uniprot
Match: A0A6H5J913_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J913_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 5.530e-5
Identity = 20/55 (36.36%), Postives = 34/55 (61.82%), Query Frame = 0 
Query:    1 KQCRVPTCAKLPTFTYPDVGVQWCFKHQKKGMVDVISRRCMHAGRMKIASFGPKG 55
            + C+ P C   P++       ++C +H K+GM++V++R+C H G +K ASFG  G
Sbjct:  226 RSCQEPECTTWPSYGARLKKAEFCKRHAKQGMINVVTRKCSHPGCIKSASFGKHG 280
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|169280 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835YMK9_9STRA7.550e-40100.00EsV-1-7 n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
A0A835YWI0_9STRA2.640e-742.62Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A6H5J913_9PHAE5.530e-536.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.140.110coord: 53..117
e-value: 3.1E-8
score: 35.8
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 46..70
e-value: 5.2E-4
score: 20.6
coord: 77..110
e-value: 2.6E-5
score: 24.7
coord: 3..35
e-value: 0.0036
score: 17.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_62contigContig_62:770158..770553 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169280mRNA_6594Tribonema minus UTEX_B_3156 mRNAContig_62 770158..770553 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|169280|e_gw1.62.183.1 ID=Trimin1|169280|e_gw1.62.183.1|Name=jgi.p|Trimin1|169280|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=132bp
KQCRVPTCAKLPTFTYPDVGVQWCFKHQKKGMVDVISRRCMHAGRMKIAS
FGPKGGRRTHCAEHAQDGMLCTVNKRCDHPGCLKQPSFGYDRGRAINFSE
HAMQGMRDVVSKQCADPNCREQVCYGVVRGH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys