Trimin1|168941|e_gw1.61.169.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|168941
Unique NameTrimin1|168941|e_gw1.61.169.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length270
Homology
BLAST of jgi.p|Trimin1|168941 vs. uniprot
Match: A0A835YXA6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXA6_9STRA)

HSP 1 Score: 528 bits (1360), Expect = 2.170e-189
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0
Query:    1 MSVKKKQGRPKRPRIRLTNRETWLGGRSFEMKKAEEAREASGLDWEYHAAVLLERLPVVVPEPEDWEVAWMDFMSEFRWNCGRQYPAELDIWREDRDAPAPSFREQHEACPIPLAPRVTEADASGDRTTLHRALDRRIFLLERASDAEPWRFVTAAVQRGGXXXXXXXXXETLRAAAERALAAALRPDVPGFKYWHVGNGPAGVDWRIFGEEERAARGAFGEKVFLMRAQIVVGEPAFARRGVQRVWVAKEELAEYFGAERGQYYVKLL 269
            MSVKKKQGRPKRPRIRLTNRETWLGGRSFEMKKAEEAREASGLDWEYHAAVLLERLPVVVPEPEDWEVAWMDFMSEFRWNCGRQYPAELDIWREDRDAPAPSFREQHEACPIPLAPRVTEADASGDRTTLHRALDRRIFLLERASDAEPWRFVTAAVQRGGXXXXXXXXXETLRAAAERALAAALRPDVPGFKYWHVGNGPAGVDWRIFGEEERAARGAFGEKVFLMRAQIVVGEPAFARRGVQRVWVAKEELAEYFGAERGQYYVKLL
Sbjct:    1 MSVKKKQGRPKRPRIRLTNRETWLGGRSFEMKKAEEAREASGLDWEYHAAVLLERLPVVVPEPEDWEVAWMDFMSEFRWNCGRQYPAELDIWREDRDAPAPSFREQHEACPIPLAPRVTEADASGDRTTLHRALDRRIFLLERASDAEPWRFVTAAVQRGGXXXXXXXXXETLRAAAERALAAALRPDVPGFKYWHVGNGPAGVDWRIFGEEERAARGAFGEKVFLMRAQIVVGEPAFARRGVQRVWVAKEELAEYFGAERGQYYVKLL 269          
BLAST of jgi.p|Trimin1|168941 vs. uniprot
Match: W7TRZ1_9STRA (Mitochondrial ribosomal protein l46 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRZ1_9STRA)

HSP 1 Score: 119 bits (298), Expect = 6.220e-28
Identity = 89/263 (33.84%), Postives = 127/263 (48.29%), Query Frame = 0
Query:    1 MSVKKKQGRPKRPRIRLTNRETWLGGRSFEMKKAEEAREASGLDWEYHAAVLLERLPVVVPEPEDWEVAWMDFMSEFRWNCGRQYPAELDIWREDRDAPAPSFREQHEACPIPLAPRVTEADASGDRTTLHRALDRRIFLLERASDAEP-WRFVTAAVQRGGXXXXXXXXX--ETLRAAAERALAAALRPDVPGFKYWHVGNGPAGVDWRIFGEEERAARGA---FGEKVFLMRAQIVVGEPAFARRGVQR-VWVAKEELAEY 256
            +  KKK+G  KRP    ++   +L  R+ ++ + E A + + L W   AA ++ER P+++ EPEDWE A+M+   E     G+ +P EL++  +  +    S  E     P  LAPRVT+AD   DRTTL+RAL  R+FLL R       W    A ++ GG           +T  A   R L       VP        N P G+ WR+  E      G    +G+KVF  RAQ + G       GV+  VWV +EE+ EY
Sbjct:   86 LKPKKKKG--KRP----SSTAAYLQSRAAQLSRHEAAAKEANLPWRIVAASIVERHPIIMKEPEDWEAAYMEMQEEIA-KHGKVFPPELNLMGQAAELDR-SDDEVLPELPFKLAPRVTKADRLNDRTTLNRALAERLFLLIRGPVTRGRWDLPMAVLEGGGKGGDMKGLSMRKTHEATVRRFLGDKFEAYVPS-------NAPVGMHWRVPSEPSTGKTGGEQTYGDKVFFYRAQHLKGRGKVVGEGVEEFVWVTREEMGEY 333          
BLAST of jgi.p|Trimin1|168941 vs. uniprot
Match: A0A7S2Q3E7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q3E7_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.510e-21
Identity = 81/263 (30.80%), Postives = 120/263 (45.63%), Query Frame = 0
Query:   15 IRLTNRETWLGGRSFEMKKAEEAREASGLDWEYHAAVLLERLPVVVPEPEDWEVAWMDFMSEFRWNCGRQYPAELDIW---REDRDAPAPSFREQHEACPIPLAPRVTEADASGDRTTLHRALDRRIFLLERASDAEPWRFVTAAVQRGGXXXXXXXXXETLRAAAERALAAALRPDVPGFKYWHVGNGPAGVDWRIFGEE--ERAARGAFGEKVFLMRAQIV-----VGEPAFARRGVQRVWVAKEELAEYFGAERGQYYVK 267
            ++ T   +W         K +   +  G  W    AV++ERLPVV P+ E+WE  + D + +F    G++YPAE        +  D    S  +     P   APR TEADASGD  TL R L  R++L  + SD E       +  R           E+L AAAERA++ ++  D+   K W   N P  V+ R++ ++  E      FGEK+F  R Q       V E A   +     W+ +EE+ +    ERG++  K
Sbjct:  130 VKRTLFRSWWDKEMMYHNKLQRMAKKEGKPWRVRVAVMVERLPVVTPDEEEWEQDYND-LRDFLETFGKEYPAETGFMFAPDKSEDHVVESDEDMIAGLPFTPAPRETEADASGDVKTLDRQLKTRLYLTIK-SDTEG----NLSGPRWTLPSTIAETNESLLAAAERAVSDSVGSDL---KLWCPSNAPMAVNMRVYNDKLPESFRENYFGEKIFYYRVQYDNTGGDVDEAAM--KADDYAWLTREEVVDRIEEERGKHQAK 381          
BLAST of jgi.p|Trimin1|168941 vs. uniprot
Match: A0A7S2XUX8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUX8_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 2.720e-19
Identity = 75/246 (30.49%), Postives = 111/246 (45.12%), Query Frame = 0
Query:   27 RSFEMKKAEEAREASGLDWEYHAAVLLERLPVVVPEPEDWEVAWMDFMSEFRWNCGRQYPAELDIWREDRDAPAPS--FREQHEACPIPLAPRVTEADASGDRTTLHRALDRRIFLLERASDAEP-----WRFVTAAVQRGGXXXXXXXXXETLRAAAERALAAALRPDVPGFKYWHVGNGPAGVDWRIFGEEERAARG-AFGEKVFLMRAQIVVGEPAFARRGVQRVWVAKEELAEYFGAERGQY 264
            R  + +K E   E  GL W    AV++E LP ++P+ E WE  W D   E+  + GR +P+E ++     +A      +    EA   P APR+TEAD SGDR T++R L  R  L+ +     P     W F  A V+             T+   AER +A      +  F  W +G  P    W  +  ++  AR  A+GE+VF    Q + G      R +   WV ++EL +YF  +   Y
Sbjct:   62 RMEDFRKHEMRAEKMGLPWRNITAVVVEALPDIIPDKEPWEKDWEDLRDEYDLH-GRMFPSEYNLMDPTMEAVKEEDLYALAKEAGFEP-APRITEADKSGDRRTMNRRLWERRLLVVKRDQKRPGPMSQWCFPFAPVRE---------EDHTMMEVAERVVAEQCGRKLETF--W-LGRAPVAWWWHPYPNDKIRARAKAYGEQVFFYSCQYIDGNFKLPDRLIDHAWVTRDELQDYFPEDFSTY 293          
BLAST of jgi.p|Trimin1|168941 vs. uniprot
Match: A0A830C868_9LAMI (39S ribosomal protein l46 mitochondrial n=2 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830C868_9LAMI)

HSP 1 Score: 90.5 bits (223), Expect = 4.420e-18
Identity = 81/234 (34.62%), Postives = 116/234 (49.57%), Query Frame = 0
Query:   41 SGLDWEYHAAVLLERLPVVVPEPEDWEVAWMDFMSEFRWNCGRQYPAELDIWREDRDAPAPSFREQHEACPIPLAPRVTEADASGDRTTLHRALDRRIFLL----ERASDAEP-WRFVTAAVQRGGXXXXXXXXXETLRAAAERALAAALRPDVPGFKYWHVGNGPAGVDWRIFGEEERAARGAFGEKVFLMRAQIVVGEPAFARRGVQRVWVAKEELAEYFGAERGQYYVKLL 269
            SG D +  AAVL ERLPVV+P+ +    A+ +F   +R    R+YP   + + +  DA       Q +  P   APR+TEAD SGD+ +LHRALDRR++LL       SD +P W F   A +            +TLR  AE AL + +  D+     + VGN P G    I   E  ++      K F  ++Q++        +    VWV K+EL EYF  E+ QY  K++
Sbjct:   27 SGGDEKIVAAVLFERLPVVIPKIDPVVYAFQEFSYRWRQQYRREYP---EAFLKKADARGKGDY-QIDFTP---APRITEADKSGDKRSLHRALDRRLYLLIYGPAHGSDGKPVWHFPEKAYES----------EKTLRKCAESALQSVIG-DLS--HTYFVGNAPMG-HMNIQPSENDSSL-----KRFFFKSQVIATNKFNIEKCEDYVWVTKDELLEYF-PEQAQYLNKMI 233          
BLAST of jgi.p|Trimin1|168941 vs. uniprot
Match: A0A1Z5JLV9_FISSO (MRP-L46 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLV9_FISSO)

HSP 1 Score: 89.4 bits (220), Expect = 4.320e-17
Identity = 71/246 (28.86%), Postives = 113/246 (45.93%), Query Frame = 0
Query:   37 AREASGLDWEYHAAVLLERLPVVVPEPEDWEVAWMDFMSEFRWNCGRQYPAELDIWREDRDAPAPSFREQHEACP-------IPLAPRVTEADASGDRTTLHRALDRRIFLLERASDAEPWRFVTAAVQRGGXXXXXXXXXETLRAAAERALAAALRPDVPGFKYWHVGNGPAGVDWRIFGEEERAARGAFGEKVFLMRAQIVVGEPAFARRGVQRV----WVAKEELAEYFGAERGQ--YYVKLL 269
            AR+A GL W+ H AV++ERL VV+P+ E+WE+ + D  ++ +   G+ YP  L     +  A         +             APR+TEAD SGD  T  R L   I+L     +   W+F T A++            E L  AA+RA+  A+  ++   ++W   N P  V+   F  E++     +G K F ++ Q   G+    + G Q+V    W+ + E+ E    + G   +Y  LL
Sbjct:   91 ARQA-GLGWKIHVAVIVERLNVVLPDQEEWEMEFEDLQNQLQ-QFGKDYPKGLFPSAAEHSAQETHLTRNDDILEYLEKVKGFTPAPRITEADKSGDVRTTGRKLKTSIYLT--VQEDSTWKFPTVALK----------DDEMLLDAAKRAIPEAVGEEL---EFWCPSNCPVAVEMMAFPTEQQQKEQQYGSKTFFIKVQFDEGK---VKTGTQKVTDFAWLDRSEIVERVEKQNGDGAFYKYLL 316          
BLAST of jgi.p|Trimin1|168941 vs. uniprot
Match: A0A8K1C2Z6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2Z6_PYTOL)

HSP 1 Score: 87.4 bits (215), Expect = 1.770e-16
Identity = 75/244 (30.74%), Postives = 113/244 (46.31%), Query Frame = 0
Query:   42 GLDWEYHAAVLLERLPVVVPEPEDWEVAWMDF-MSEFRWNCGRQYPAELDIWRED--------RDAPAPSFREQHE---ACPIPLAPRVTEADASGDRTTLHRALDRRIFLLER--ASDAE-PWRFVTAAVQRGGXXXXXXXXXETLRAAAERALAAALRPDVPGFKYWHVGNGPAGVDWRIFGEEERAARGAFGEKVFLMRAQIVVGEPAF-ARRGVQRVWVAKEELAEYFGAERGQYYVKLL 269
            G  W   +A +LERLPV+ P+ EDWE   +DF M +      +    E D W  +         +AP P+  +  E        LAPR TE D + +R +L+RAL  R+FL+ +  A DA+ PW F     Q            E +R AA R L      ++   + + VG  P G    +  +  + A G  G KVF  ++Q++VG+    A      +WV + EL EYF  +  +Y  K++
Sbjct:   72 GKKWRVLSASVLERLPVIQPDDEDWE---LDFDMMQHEIALRQDQRLEDDFWFMEPGERHITPEEAPWPNTPDNPEDIVGAGFHLAPRETEDDKNDNRKSLNRALKGRVFLIVKNNAPDAKFPWFFPVGEKQ----------DEEKMRDAALRQLGEYCGSEL---EVYPVGYAPMGYVKYLHDDATKQASGFDGTKVFFYKSQVIVGDVKLNAAHASDYLWVTQSELNEYFEKDVAEYLTKMV 299          
BLAST of jgi.p|Trimin1|168941 vs. uniprot
Match: A0A2D4C5V0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5V0_PYTIN)

HSP 1 Score: 85.9 bits (211), Expect = 2.520e-15
Identity = 82/277 (29.60%), Postives = 118/277 (42.60%), Query Frame = 0
Query:   10 PKRPRIRLTNRETWLGGRSFEMKKAEEAREASGLDWEYHAAVLLERLPVVVPEPEDWEVAWMDFMSEFRWNCGRQYPAELDIWRED--------RDAPAPSFREQHE---ACPIPLAPRVTEADASGDRTTLHRALDRRIFLLERASDAE-----PWRFVTAAVQRGGXXXXXXXXXETLRAAAERALAAALRPDVPGFKYWHVGNGPAGVDWRIFGEEERAARGAFGEKVFLMRAQIVVGEPAF-ARRGVQRVWVAKEELAEYFGAERGQYYVKLL 269
            P RP+++  N   +LG    E           G  W   +A +LERLPV+ P+PEDWEV +     E      ++   E D W  +         +AP P+  E  E        LAPR TE D + +R +L+RAL  R+FLL + ++       PW F                   T + A E+   AAL     GF        P G          +AA G  G KVF  +AQ+  G+    A +    +WV + ELAEYF  +  +Y +K++
Sbjct:  299 PLRPKVQRGN---YLGATPAE----------DGKTWRVLSAGVLERLPVIQPDPEDWEVDFALVQHEIALKNSQRL--EDDFWFMEPGERHITPEEAPLPNAEEDPEEIVGAGFHLAPRETEDDRTDNRKSLNRALKGRVFLLVQPTEQATPLPAPWFFPL-----------------TEKKADEKMRDAALAVHPVGFA-------PMGHLQFEHDAATKAATGVDGTKVFFYKAQVRFGDVELNAAKSSDYLWVTQRELAEYFEKDVAEYLIKMV 536          
BLAST of jgi.p|Trimin1|168941 vs. uniprot
Match: A0A6I9RKP9_ELAGV (39S ribosomal protein L46, mitochondrial n=3 Tax=Arecaceae TaxID=4710 RepID=A0A6I9RKP9_ELAGV)

HSP 1 Score: 82.8 bits (203), Expect = 2.950e-15
Identity = 72/228 (31.58%), Postives = 113/228 (49.56%), Query Frame = 0
Query:   49 AAVLLERLPVVVPEPEDWEVAWMDFMSEFRWNCGRQYPAELDIWREDRDAPAPSFREQHEACPIPLAPRVTEADASGDRTTLHRALDRRIFLLERAS-----DAEP-WRFVTAAVQRGGXXXXXXXXXETLRAAAERALAAALRPDVPGFKY-WHVGNGPAGVDWRIFGEEERAARGAFGEKVFLMRAQIVVGEPAFARRGVQRVWVAKEELAEYFGAERGQYYVKLL 269
            AAVL ERLPVV+P+ +    A+ +F   +R    R+YP E+ + + D        + +++   +P APR+TEAD + DR +L RALDRR++LL   S     D +P W F     +            ETLR  AE AL + L     G ++ + VGN P      +  +E  +   +F    F  ++Q++        +    VWV K+EL EYF  E+  ++ K++
Sbjct:   28 AAVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYRRRYPDEV-LGKGDARG-----KGEYQIDYVP-APRITEADKTNDRRSLQRALDRRLYLLLNGSTYGAPDKKPVWHFPEKIYEN----------EETLRLCAESALRSVLG----GLQHTYFVGNAPM-AHMTVEPKEHSSDTPSFER--FFFKSQVIGTSKLHIEKCRDYVWVTKDELMEYF-PEQADFFNKMI 230          
BLAST of jgi.p|Trimin1|168941 vs. uniprot
Match: E1ZJP2_CHLVA (MRP-L46 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZJP2_CHLVA)

HSP 1 Score: 82.4 bits (202), Expect = 6.020e-15
Identity = 68/211 (32.23%), Postives = 99/211 (46.92%), Query Frame = 0
Query:   52 LLERLPVVVPEPEDWEVAWMDFMSEFRWNCGRQYPAELDIWREDRDAPAPSFREQHEACPIPLAPRVTEADASGDRTTLHRALDRRIFLLER---ASDAEPWRFVTAAVQRGGXXXXXXXXXETLRAAAERALAAALRPDVPGFKYWHVGNGPAGVDWRIFGEEERAARGAFGEKVFLMRAQIVVGEPAFARRGV---QRVWVAKEELAEY 256
            +LERLPV++P+P +WE    ++         +  P +  +  +D +  A     ++E      APR+T AD + DR +L R LD+R+F+L R    S    W  +    Q G          ET+R  AERALA  +   V   + + VGN PAG            A G  G  +F  R Q++ G P   R G    + +WVAK+EL EY
Sbjct:   61 VLERLPVIIPDPPEWEQEHREWQQAITEKYFKVLPKDF-VELKDSERQADDAGARYEP-----APRITAADKANDRRSLQRRLDQRLFMLVRPKGGSGGGAWSLMQRENQEG----------ETMRQTAERALAECVDESV--VQPYFVGNAPAG----------HVALGEAGT-LFFHRCQLIQGVPVL-RGGSGYSEHLWVAKDELPEY 241          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|168941 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YXA6_9STRA2.170e-189100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TRZ1_9STRA6.220e-2833.84Mitochondrial ribosomal protein l46 n=2 Tax=Nannoc... [more]
A0A7S2Q3E7_9STRA2.510e-2130.80Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S2XUX8_9STRA2.720e-1930.49Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A830C868_9LAMI4.420e-1834.6239S ribosomal protein l46 mitochondrial n=2 Tax=Ph... [more]
A0A1Z5JLV9_FISSO4.320e-1728.86MRP-L46 domain-containing protein n=2 Tax=Fistulif... [more]
A0A8K1C2Z6_PYTOL1.770e-1630.74Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4C5V0_PYTIN2.520e-1529.60Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A6I9RKP9_ELAGV2.950e-1531.5839S ribosomal protein L46, mitochondrial n=3 Tax=A... [more]
E1ZJP2_CHLVA6.020e-1532.23MRP-L46 domain-containing protein n=1 Tax=Chlorell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.79.10Nucleoside Triphosphate Pyrophosphohydrolasecoord: 126..269
e-value: 1.8E-20
score: 75.0
NoneNo IPR availablePANTHERPTHR13124:SF1239S RIBOSOMAL PROTEIN L46, MITOCHONDRIALcoord: 28..261
IPR04000839S ribosomal protein L46, mitochondrialPANTHERPTHR1312439S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATEDcoord: 28..261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_61contigContig_61:473914..475536 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168941mRNA_8716Tribonema minus UTEX_B_3156 mRNAContig_61 473914..475536 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|168941|e_gw1.61.169.1 ID=Trimin1|168941|e_gw1.61.169.1|Name=jgi.p|Trimin1|168941|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=270bp
MSVKKKQGRPKRPRIRLTNRETWLGGRSFEMKKAEEAREASGLDWEYHAA
VLLERLPVVVPEPEDWEVAWMDFMSEFRWNCGRQYPAELDIWREDRDAPA
PSFREQHEACPIPLAPRVTEADASGDRTTLHRALDRRIFLLERASDAEPW
RFVTAAVQRGGSGGGDGGGGETLRAAAERALAAALRPDVPGFKYWHVGNG
PAGVDWRIFGEEERAARGAFGEKVFLMRAQIVVGEPAFARRGVQRVWVAK
EELAEYFGAERGQYYVKLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040008MRPL46