Trimin1|168872|e_gw1.60.82.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|168872
Unique Name	Trimin1\|168872\|e_gw1.60.82.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	139

Homology

[Close]

BLAST of jgi.p|Trimin1|168872 vs. uniprot
Match: A0A835YQX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQX7_9STRA)

HSP 1 Score: 276 bits (705), Expect = 7.320e-94
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0

Query:    1 EKNETIVCREIGGVMARMWPAYLHRCHALVFVIDASSVSNADGASAALHALIAHDHLQQKPVIVCLNKVGTTTQADLATLQELLHIDDLVDNWKAGFTLCHTDAASGAGVARVLQLARALHRDPQTSKALAATATFTP 138
            EKNETIVCREIGGVMARMWPAYLHRCHALVFVIDASSVSNADGASAALHALIAHDHLQQKPVIVCLNKVGTTTQADLATLQELLHIDDLVDNWKAGFTLCHTDAASGAGVARVLQLARALHRDPQTSKALAATATFTP
Sbjct:    1 EKNETIVCREIGGVMARMWPAYLHRCHALVFVIDASSVSNADGASAALHALIAHDHLQQKPVIVCLNKVGTTTQADLATLQELLHIDDLVDNWKAGFTLCHTDAASGAGVARVLQLARALHRDPQTSKALAATATFTP 138

[Close]

BLAST of jgi.p|Trimin1|168872 vs. uniprot
Match: A0A7M7NVY6_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NVY6_STRPU)

HSP 1 Score: 63.2 bits (152), Expect = 8.750e-10
Identity = 33/109 (30.28%), Postives = 57/109 (52.29%), Query Frame = 0

Query:    1 EKNETIVCREIGGVMARMWPAYLHRCHALVFVIDASSVSNADGASAALHALIAHDHLQQKPVIVCLNKVGTTTQADLATLQELLHIDDLVDNWKAGFTLCHTDAASGAG 109
            +KNE  V RE+GG+MA +WP Y   C  +++V+D S++S    A   L  +++   LQ   +++ LNK        +  ++ LLH++DL  +      +    A +G G
Sbjct:   52 KKNEVRV-RELGGMMAPIWPNYFADCSIVLYVVDVSNLSQVSSACIQLLHVLSDPRLQTASILIILNKSDLPPPMSIQQIRSLLHLEDLAVSANQRIDVLEVSALTGQG 159

[Close]

BLAST of jgi.p|Trimin1|168872 vs. uniprot
Match: UPI001BB0F0D2 (ADP-ribosylation factor-like protein 16 n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB0F0D2)

HSP 1 Score: 61.2 bits (147), Expect = 6.060e-9
Identity = 31/114 (27.19%), Postives = 57/114 (50.00%), Query Frame = 0

Query:    2 KNETIVCREIGGVMARMWPAYLHRCHALVFVIDASSVSNADGASAALHALIAHDHLQQKPVIVCLNKVGTTTQADLATLQELLHIDDLVDNWKAGFTLCHTDAASGAGVARVLQ 115
            K   +  RE+GG+MA +WP Y      +++V+D S++S    A   L  ++    LQ   ++V LNK        +  ++ LLH+DD+ ++      +    A +G G+  V++
Sbjct:   52 KKIEVRVRELGGMMAPIWPNYFTDSSIVLYVVDVSNMSQVSSACIQLLQVLTDPKLQNASILVVLNKSDLPLPMSMQQIRSLLHLDDIANSASQRIEVLQVSALTGQGLDEVVR 165

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|168872 vs. uniprot

BLAST of jgi.p|Trimin1|168872 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835YQX7_9STRA	7.320e-94	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7M7NVY6_STRPU	8.750e-10	30.28	Uncharacterized protein n=1 Tax=Strongylocentrotus...	[more]
UPI001BB0F0D2	6.060e-9	27.19	ADP-ribosylation factor-like protein 16 n=1 Tax=Ly...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..133 e-value: 8.9E-17 score: 63.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 10..119
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 10..114 e-value: 2.8E-12 score: 46.4
None	No IPR available	PANTHER	PTHR46688	ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 16	coord: 3..121

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_60	contig	Contig_60:321091..321507 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|168872	mRNA_6787	Tribonema minus UTEX_B_3156	mRNA	Contig_60 321091..321507 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|168872|e_gw1.60.82.1 ID=Trimin1|168872|e_gw1.60.82.1|Name=jgi.p|Trimin1|168872|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=139bp
EKNETIVCREIGGVMARMWPAYLHRCHALVFVIDASSVSNADGASAALHA
LIAHDHLQQKPVIVCLNKVGTTTQADLATLQELLHIDDLVDNWKAGFTLC
HTDAASGAGVARVLQLARALHRDPQTSKALAATATFTP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR006689	Small_GTPase_ARF/SAR