Trimin1|168655|e_gw1.59.52.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|168655
Unique Name	Trimin1\|168655\|e_gw1.59.52.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	136

Homology

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BLAST of jgi.p|Trimin1|168655 vs. uniprot
Match: A0A836CAV6_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV6_9STRA)

HSP 1 Score: 272 bits (695), Expect = 1.960e-92
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0

Query:    1 MQRQHQQHAQLLHPCYSFAADDDDVVDFSGAATQERIAALVADNPILVFMKGNRMFPQCGYSGTVVQILNQLGVPYETVDVMADDRIREGVKDFSNWPTIPQLYLNGEFVGGADIVIELYQTGELLEQIEIAAAS 135
            MQRQHQQHAQLLHPCYSFAADDDDVVDFSGAATQERIAALVADNPILVFMKGNRMFPQCGYSGTVVQILNQLGVPYETVDVMADDRIREGVKDFSNWPTIPQLYLNGEFVGGADIVIELYQTGELLEQIEIAAAS
Sbjct:    1 MQRQHQQHAQLLHPCYSFAADDDDVVDFSGAATQERIAALVADNPILVFMKGNRMFPQCGYSGTVVQILNQLGVPYETVDVMADDRIREGVKDFSNWPTIPQLYLNGEFVGGADIVIELYQTGELLEQIEIAAAS 135

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BLAST of jgi.p|Trimin1|168655 vs. uniprot
Match: UPI001682BFA1 (Grx4 family monothiol glutaredoxin n=1 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI001682BFA1)

HSP 1 Score: 158 bits (400), Expect = 7.330e-48
Identity = 72/103 (69.90%), Postives = 88/103 (85.44%), Query Frame = 0

Query:   33 TQERIAALVADNPILVFMKGNRMFPQCGYSGTVVQILNQLGVPYETVDVMADDRIREGVKDFSNWPTIPQLYLNGEFVGGADIVIELYQTGELLEQIEIAAAS 135
            TQERI  LV DN I+VFMKGN++ PQCG+S  VVQILN LGVP+ET DV+AD  IR+G+K+FSNWPTIPQ+Y+NGEFVGG+DI+IELYQ G+L E +E+A AS
Sbjct:    5 TQERIQKLVQDNKIMVFMKGNKLMPQCGFSNNVVQILNVLGVPFETCDVLADQEIRQGIKEFSNWPTIPQVYVNGEFVGGSDILIELYQNGQLREMVEVALAS 107

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BLAST of jgi.p|Trimin1|168655 vs. uniprot
Match: A0A7C3ZZR4_9CYAN (Glutaredoxin n=2 Tax=Oscillatoriales TaxID=1150 RepID=A0A7C3ZZR4_9CYAN)

HSP 1 Score: 157 bits (398), Expect = 1.480e-47
Identity = 71/102 (69.61%), Postives = 89/102 (87.25%), Query Frame = 0

Query:   34 QERIAALVADNPILVFMKGNRMFPQCGYSGTVVQILNQLGVPYETVDVMADDRIREGVKDFSNWPTIPQLYLNGEFVGGADIVIELYQTGELLEQIEIAAAS 135
            +ER+  LV +N I++FMKGN++ PQCG+S  VVQILN LGVPYETVDV+AD  IR+G+K++SNWPTIPQLY+NGEF+GG+DI IELYQ+GEL E+IEIA AS
Sbjct:    6 KERLDQLVKENKIMLFMKGNKLMPQCGFSNNVVQILNSLGVPYETVDVLADGEIRQGIKEYSNWPTIPQLYINGEFIGGSDIAIELYQSGELAEKIEIALAS 107

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BLAST of jgi.p|Trimin1|168655 vs. uniprot
Match: D8LG05_ECTSI (Glutaredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG05_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 4.900e-47
Identity = 76/112 (67.86%), Postives = 91/112 (81.25%), Query Frame = 0

Query:   28 FSGAATQERIAA----LVADNPILVFMKGNRMFPQCGYSGTVVQILNQLGVPYETVDVMADDRIREGVKDFSNWPTIPQLYLNGEFVGGADIVIELYQTGELLEQIEIAAAS 135
            F   A QER  A    +V+ + IL F+KGNR+ PQCGYSGT+V IL  L VP+ETVDV+AD+RIR+G+KDFSNWPTIPQLYL GEF+GGADIVIEL+Q+GEL E IE+AAAS
Sbjct:   12 FGARAMQERTHAELQEMVSSHNILAFIKGNRLMPQCGYSGTLVNILQSLSVPFETVDVLADERIRQGIKDFSNWPTIPQLYLGGEFIGGADIVIELFQSGELQEMIEVAAAS 123

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BLAST of jgi.p|Trimin1|168655 vs. uniprot
Match: A0A2T2VXY6_9CYAN (Glutaredoxin n=16 Tax=Cyanobacteria/Melainabacteria group TaxID=1798711 RepID=A0A2T2VXY6_9CYAN)

HSP 1 Score: 155 bits (392), Expect = 1.210e-46
Identity = 70/105 (66.67%), Postives = 91/105 (86.67%), Query Frame = 0

Query:   31 AATQERIAALVADNPILVFMKGNRMFPQCGYSGTVVQILNQLGVPYETVDVMADDRIREGVKDFSNWPTIPQLYLNGEFVGGADIVIELYQTGELLEQIEIAAAS 135
            +AT+ER+  L+ +N I+VFMKGN++ PQCG+S  VVQILN LGVP+ETVDV+AD  IR+G+K++SNWPTIPQ+Y+NGEFVGG+DI+IELYQ G+L E +EIA AS
Sbjct:    3 SATKERLDQLIQNNTIMVFMKGNKLMPQCGFSNNVVQILNVLGVPFETVDVLADPDIRQGIKEYSNWPTIPQVYINGEFVGGSDILIELYQNGKLQEMVEIAMAS 107

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BLAST of jgi.p|Trimin1|168655 vs. uniprot
Match: D8FTI6_9CYAN (Glutaredoxin n=2 Tax=Oscillatoriales TaxID=1150 RepID=D8FTI6_9CYAN)

HSP 1 Score: 155 bits (391), Expect = 1.720e-46
Identity = 70/104 (67.31%), Postives = 88/104 (84.62%), Query Frame = 0

Query:   32 ATQERIAALVADNPILVFMKGNRMFPQCGYSGTVVQILNQLGVPYETVDVMADDRIREGVKDFSNWPTIPQLYLNGEFVGGADIVIELYQTGELLEQIEIAAAS 135
            A  ++I +LV  N +LVFMKGN++ PQCG+S  VVQILN LGVP+ETVDV+AD  IR+GVK++SNWPTIPQ+Y+NGEFVGG+DI+IELYQ GEL E +E+A AS
Sbjct:    4 AAHDKIESLVKQNKVLVFMKGNKLMPQCGFSNNVVQILNTLGVPFETVDVLADPEIRQGVKEYSNWPTIPQVYINGEFVGGSDIMIELYQKGELQEMVEVALAS 107

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BLAST of jgi.p|Trimin1|168655 vs. uniprot
Match: A0A1E5QGL9_9CYAN (Glutaredoxin n=2 Tax=unclassified Desertifilum TaxID=2621682 RepID=A0A1E5QGL9_9CYAN)

HSP 1 Score: 155 bits (391), Expect = 1.720e-46
Identity = 71/102 (69.61%), Postives = 88/102 (86.27%), Query Frame = 0

Query:   34 QERIAALVADNPILVFMKGNRMFPQCGYSGTVVQILNQLGVPYETVDVMADDRIREGVKDFSNWPTIPQLYLNGEFVGGADIVIELYQTGELLEQIEIAAAS 135
            QE+I +LV  N ILVFMKGN++ PQCG+S  VVQILN LGVP+ETVDV+AD  IR+G+K++SNWPTIPQ+Y+NGEFVGG+DI+IELYQ GEL E +E+A AS
Sbjct:    6 QEKIDSLVNQNKILVFMKGNKLMPQCGFSNNVVQILNALGVPFETVDVLADPDIRQGIKEYSNWPTIPQVYINGEFVGGSDIMIELYQKGELQEMVEVALAS 107

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BLAST of jgi.p|Trimin1|168655 vs. uniprot
Match: K8GGZ7_9CYAN (Glutaredoxin n=3 Tax=Cyanobacteria TaxID=1117 RepID=K8GGZ7_9CYAN)

HSP 1 Score: 154 bits (390), Expect = 2.440e-46
Identity = 69/103 (66.99%), Postives = 87/103 (84.47%), Query Frame = 0

Query:   33 TQERIAALVADNPILVFMKGNRMFPQCGYSGTVVQILNQLGVPYETVDVMADDRIREGVKDFSNWPTIPQLYLNGEFVGGADIVIELYQTGELLEQIEIAAAS 135
            TQ RI  L+  N I+VFMKGN++ PQCG+S  VVQILN LGVPYETVDV+AD  IR+G+K++SNWPTIPQ+Y+NGEF+GG+DI+IELYQ GEL + +E+A AS
Sbjct:    5 TQARIDELIQSNKIMVFMKGNKLMPQCGFSNNVVQILNVLGVPYETVDVLADPEIRQGIKEYSNWPTIPQVYINGEFIGGSDIMIELYQKGELQQMVEVALAS 107

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BLAST of jgi.p|Trimin1|168655 vs. uniprot
Match: A0A3B8JI96_9CYAN (Glutaredoxin n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A3B8JI96_9CYAN)

HSP 1 Score: 153 bits (387), Expect = 6.990e-46
Identity = 70/102 (68.63%), Postives = 87/102 (85.29%), Query Frame = 0

Query:   34 QERIAALVADNPILVFMKGNRMFPQCGYSGTVVQILNQLGVPYETVDVMADDRIREGVKDFSNWPTIPQLYLNGEFVGGADIVIELYQTGELLEQIEIAAAS 135
            +ERI  LV  N ILVFMKGN++ PQCG+S  VVQILN LGVPYETVDV+AD  IR+G+KD+S+WPTIPQ+Y+NGEFVGG+D++IELYQ GEL + +E+A AS
Sbjct:    6 KERIDNLVKQNKILVFMKGNKLMPQCGFSNNVVQILNTLGVPYETVDVLADPEIRQGIKDYSSWPTIPQVYINGEFVGGSDVMIELYQQGELQQLVEVALAS 107

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BLAST of jgi.p|Trimin1|168655 vs. uniprot
Match: K9XYP7_STAC7 (Glutaredoxin n=2 Tax=Stanieria TaxID=102115 RepID=K9XYP7_STAC7)

HSP 1 Score: 153 bits (386), Expect = 9.920e-46
Identity = 69/104 (66.35%), Postives = 90/104 (86.54%), Query Frame = 0

Query:   32 ATQERIAALVADNPILVFMKGNRMFPQCGYSGTVVQILNQLGVPYETVDVMADDRIREGVKDFSNWPTIPQLYLNGEFVGGADIVIELYQTGELLEQIEIAAAS 135
            A ++RI  L+ +N ILVFMKG+++ PQCG+S  VVQILN LGVPYETVDV+AD  IR+G+K++SNWPTIPQ+Y+NGEFVGG+DI+IELYQ+GEL + +E+A AS
Sbjct:    4 AVKDRIDQLINNNKILVFMKGSKLMPQCGFSNNVVQILNTLGVPYETVDVLADLEIRQGIKEYSNWPTIPQVYINGEFVGGSDIMIELYQSGELQQMVEVALAS 107

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|168655 vs. uniprot

BLAST of jgi.p|Trimin1|168655 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CAV6_9STRA	1.960e-92	100.00	Thioredoxin-like protein n=1 Tax=Tribonema minus T...	[more]
UPI001682BFA1	7.330e-48	69.90	Grx4 family monothiol glutaredoxin n=1 Tax=Pseudan...	[more]
A0A7C3ZZR4_9CYAN	1.480e-47	69.61	Glutaredoxin n=2 Tax=Oscillatoriales TaxID=1150 Re...	[more]
D8LG05_ECTSI	4.900e-47	67.86	Glutaredoxin n=1 Tax=Ectocarpus siliculosus TaxID=...	[more]
A0A2T2VXY6_9CYAN	1.210e-46	66.67	Glutaredoxin n=16 Tax=Cyanobacteria/Melainabacteri...	[more]
D8FTI6_9CYAN	1.720e-46	67.31	Glutaredoxin n=2 Tax=Oscillatoriales TaxID=1150 Re...	[more]
A0A1E5QGL9_9CYAN	1.720e-46	69.61	Glutaredoxin n=2 Tax=unclassified Desertifilum Tax...	[more]
K8GGZ7_9CYAN	2.440e-46	66.99	Glutaredoxin n=3 Tax=Cyanobacteria TaxID=1117 RepI...	[more]
A0A3B8JI96_9CYAN	6.990e-46	68.63	Glutaredoxin n=4 Tax=Cyanobacteria TaxID=1117 RepI...	[more]
K9XYP7_STAC7	9.920e-46	66.35	Glutaredoxin n=2 Tax=Stanieria TaxID=102115 RepID=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 36..133 e-value: 3.9E-35 score: 121.8
None	No IPR available	PIRSR	PIRSR005894-2	PIRSR005894-2	coord: 33..130 e-value: 6.4E-43 score: 143.0
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 34..135 score: 26.518303
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 46..110 e-value: 3.8E-19 score: 68.7
IPR004480	Monothiol glutaredoxin-related	TIGRFAM	TIGR00365	TIGR00365	coord: 33..129 e-value: 1.8E-41 score: 138.3
IPR004480	Monothiol glutaredoxin-related	PANTHER	PTHR10293	GLUTAREDOXIN FAMILY MEMBER	coord: 29..126
IPR033658	Glutaredoxin, PICOT-like	CDD	cd03028	GRX_PICOT_like	coord: 37..125 e-value: 2.58888E-55 score: 166.129
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 33..130

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_59	contig	Contig_59:182489..184215 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|168655	mRNA_11106	Tribonema minus UTEX_B_3156	mRNA	Contig_59 182489..184215 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|168655|e_gw1.59.52.1 ID=Trimin1|168655|e_gw1.59.52.1|Name=jgi.p|Trimin1|168655|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=136bp
MQRQHQQHAQLLHPCYSFAADDDDVVDFSGAATQERIAALVADNPILVFM
KGNRMFPQCGYSGTVVQILNQLGVPYETVDVMADDRIREGVKDFSNWPTI
PQLYLNGEFVGGADIVIELYQTGELLEQIEIAAAS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002109	Glutaredoxin
IPR004480	Monothiol_GRX-rel
IPR033658	GRX_PICOT-like
IPR036249	Thioredoxin-like_sf