Trimin1|168533|e_gw1.58.29.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|168533
Unique NameTrimin1|168533|e_gw1.58.29.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length222
Homology
BLAST of jgi.p|Trimin1|168533 vs. uniprot
Match: A0A835YP21_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP21_9STRA)

HSP 1 Score: 456 bits (1173), Expect = 1.730e-162
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
Query:    1 METSAGVVAELDLGCPLTSLCLSPNLQYCAVGARDVVKVLDLGPEGFAEVKTLSITTKGSIKFSITDVSWSAMDSGLVAAAMNNGGIVVWDVLPSHHSERVMVEHQRTVNRVAWHPSEPALLLSCSMDNSIKLWDRRGRTHHCAVTFRPRSEAVRDVQFSPFQPHRFAAAFENGQLQVWDRRKVSQPQLKIMAHSQPIMAIDWHPMRDWVIATGSRDRTVR 221
            METSAGVVAELDLGCPLTSLCLSPNLQYCAVGARDVVKVLDLGPEGFAEVKTLSITTKGSIKFSITDVSWSAMDSGLVAAAMNNGGIVVWDVLPSHHSERVMVEHQRTVNRVAWHPSEPALLLSCSMDNSIKLWDRRGRTHHCAVTFRPRSEAVRDVQFSPFQPHRFAAAFENGQLQVWDRRKVSQPQLKIMAHSQPIMAIDWHPMRDWVIATGSRDRTVR
Sbjct:    1 METSAGVVAELDLGCPLTSLCLSPNLQYCAVGARDVVKVLDLGPEGFAEVKTLSITTKGSIKFSITDVSWSAMDSGLVAAAMNNGGIVVWDVLPSHHSERVMVEHQRTVNRVAWHPSEPALLLSCSMDNSIKLWDRRGRTHHCAVTFRPRSEAVRDVQFSPFQPHRFAAAFENGQLQVWDRRKVSQPQLKIMAHSQPIMAIDWHPMRDWVIATGSRDRTVR 221          
BLAST of jgi.p|Trimin1|168533 vs. uniprot
Match: A0A5D6XR99_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR99_9STRA)

HSP 1 Score: 213 bits (542), Expect = 3.580e-60
Identity = 106/221 (47.96%), Postives = 147/221 (66.52%), Query Frame = 0
Query:    4 SAGVVAELDLGCPLTSLCLSPNLQYCAVGARDVVKVLDLGPEGFAEVKTLSITTKGSIKFSITDVSWSAMDSGLVAAAMNNGGIVVWDVLPS---HHSERVMVEHQRTVNRVAWHPSEPALLLSCSMDNSIKLWDRRGRTHHCAVTFRPRSEAVRDVQFSPFQPHRFAAAFENGQLQVWDRRKVSQPQLKIMAHSQPIMAIDWHPMRDWVIATGSRDRTVR 221
            S GV A +D   PL +L  SPN ++ AVG RDV+KV+ L   GFAE + L +  K S+ FS  D+ W      ++A A  NG +V+W++      H  ERV+  H+R VNR+ WH ++  +L+S S D +IK+WD+RG+  +   T++P+SE+VRDV+ SPF PHRFAAAFENG +QVWD RK +QPQLK  AH   ++A+DWHP R  V+A+G RDR V+
Sbjct:    3 SRGVRASIDFSGPLNALSTSPNNRFVAVGGRDVLKVVALETAGFAEKRNLRVG-KASLNFSTNDIRWHPHADSVLATAATNGAVVIWNLQREGFKHVQERVLTGHRRAVNRICWHTTDWNVLISGSQDGTIKIWDKRGKVTN---TYQPKSESVRDVRMSPFDPHRFAAAFENGIVQVWDIRKNAQPQLKFTAHKGLVLALDWHPTRPHVLASGGRDRYVK 219          
BLAST of jgi.p|Trimin1|168533 vs. uniprot
Match: A0A6A3M4F6_9STRA (ANAPC4_WD40 domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3M4F6_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.410e-57
Identity = 102/224 (45.54%), Postives = 142/224 (63.39%), Query Frame = 0
Query:    1 METSAGVVAELDLGCPLTSLCLSPNLQYCAVGARDVVKVLDLGPEGFAEVKTLSITTKGSIKFSITDVSWSAMDSGLVAAAMNNGGIVVWDVLPS---HHSERVMVEHQRTVNRVAWHPSEPALLLSCSMDNSIKLWDRRGRTHHCAVTFRPRSEAVRDVQFSPFQPHRFAAAFENGQLQVWDRRKVSQPQLKIMAHSQPIMAIDWHPMRDWVIATGSRDRTVR 221
            M     V A +D   PL +L  SPN +  AVG RDV+KV+ L   GF+E + L +  K S+ FS  D+ W      L+A A  NG +V+W++      H  ERV+  H+R VNR+ WH ++  +L+S S D ++KLWD+RG       T++P+SE+VRDV+ SPF P++FAAAFENG +QVWD RK SQP+LK  AH   +++IDWHP    V+A+G RDR V+
Sbjct:    1 MMEQRSVRASMDFNGPLNALSTSPNNRLIAVGGRDVLKVVALEAAGFSEKRNLRVAGKPSLNFSTNDIRWHPQSDSLLATAATNGAVVIWNLEREGYKHVQERVLNGHRRAVNRICWHTTDWNVLISGSQDGTVKLWDKRGGK--VVSTYQPKSESVRDVRASPFHPNKFAAAFENGIVQVWDMRKNSQPELKFTAHKGLVLSIDWHPTDANVLASGGRDRYVK 222          
BLAST of jgi.p|Trimin1|168533 vs. uniprot
Match: G4YXX7_PHYSP (ANAPC4_WD40 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YXX7_PHYSP)

HSP 1 Score: 204 bits (518), Expect = 6.330e-57
Identity = 102/223 (45.74%), Postives = 144/223 (64.57%), Query Frame = 0
Query:    2 ETSAGVVAELDLGCPLTSLCLSPNLQYCAVGARDVVKVLDLGPEGFAEVKTLSITTKGSIKFSITDVSWSAMDSGLVAAAMNNGGIVVWDVLPS---HHSERVMVEHQRTVNRVAWHPSEPALLLSCSMDNSIKLWDRRGRTHHCAVTFRPRSEAVRDVQFSPFQPHRFAAAFENGQLQVWDRRKVSQPQLKIMAHSQPIMAIDWHPMRDWVIATGSRDRTVR 221
              +A V A +D   PL +L  SPN +  AVG RDV+KV+ L   GF+E + L +  K S+ FS  D+ W      L+A A  NG +V+W++      H  ERV+  H+R+VNR+ WH ++  +L+S S D ++KLWD+RG       T++P+SE+VRDV+ SPF P++FAAAFENG +QVWD RK SQP+LK  AH   +++IDWHP    V+A+G RDR V+
Sbjct:    4 RAAASVRASMDFSGPLNALSTSPNNRLIAVGGRDVLKVVALEAAGFSEKRNLRVAGKPSLNFSTNDIRWHPQSDYLLATAATNGAVVIWNLEREGYKHVQERVLNGHRRSVNRICWHTTDWNVLISGSQDGTVKLWDKRGGK--VVSTYQPKSESVRDVRASPFHPNKFAAAFENGIVQVWDMRKNSQPELKFTAHKGLVLSIDWHPTDANVLASGGRDRYVK 224          
BLAST of jgi.p|Trimin1|168533 vs. uniprot
Match: A0A0P1AC50_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AC50_PLAHL)

HSP 1 Score: 204 bits (518), Expect = 6.780e-57
Identity = 102/222 (45.95%), Postives = 145/222 (65.32%), Query Frame = 0
Query:    3 TSAGVVAELDLGCPLTSLCLSPNLQYCAVGARDVVKVLDLGPEGFAEVKTLSITTKGSIKFSITDVSWSAMDSGLVAAAMNNGGIVVWDVLPSHHS---ERVMVEHQRTVNRVAWHPSEPALLLSCSMDNSIKLWDRRGRTHHCAVTFRPRSEAVRDVQFSPFQPHRFAAAFENGQLQVWDRRKVSQPQLKIMAHSQPIMAIDWHPMRDWVIATGSRDRTVR 221
            T+A V A ++   PL +L LSPN +  AVG RDV+KV+ L   GF E + L +  K S+ FS  D+ W      L+A A  NG +V+W++    +    ERV+  H+R VNR+ WH S+  +L+S S D ++KLWD+RG      +T++P+SE+VRDV+ SPF P++FAAAFENG +QVWD RK +QP+LK  AH   +++IDWHP    V+A+G RDR V+
Sbjct:    5 TAASVRASMEFNGPLNALSLSPNNRLVAVGGRDVLKVVALEASGFTEKRNLRVVGKPSLNFSTNDIRWHPHSDYLLATAATNGAVVIWNLEREGYKYVQERVLNGHRRAVNRICWHTSDWNILISGSQDGTVKLWDKRGGK--VMLTYQPKSESVRDVRASPFHPNKFAAAFENGIVQVWDMRKNAQPELKFTAHKGLVLSIDWHPTDANVLASGGRDRYVK 224          
BLAST of jgi.p|Trimin1|168533 vs. uniprot
Match: A0A225WIZ9_9STRA (ANAPC4_WD40 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WIZ9_9STRA)

HSP 1 Score: 203 bits (517), Expect = 9.050e-57
Identity = 103/220 (46.82%), Postives = 141/220 (64.09%), Query Frame = 0
Query:    5 AGVVAELDLGCPLTSLCLSPNLQYCAVGARDVVKVLDLGPEGFAEVKTLSITTKGSIKFSITDVSWSAMDSGLVAAAMNNGGIVVWDVLPS---HHSERVMVEHQRTVNRVAWHPSEPALLLSCSMDNSIKLWDRRGRTHHCAVTFRPRSEAVRDVQFSPFQPHRFAAAFENGQLQVWDRRKVSQPQLKIMAHSQPIMAIDWHPMRDWVIATGSRDRTVR 221
            A V A +D   PL +L  SPN +  AVG RDV+KV+ L   GF E + L +  K S+ FS  D+ W      L+A A  NG +V+W++      H  ERV+  H+R VNR+ WH ++  +L+S S D ++KLWD+RG       T++P+SE+VRDV+ SPF P++FAAAFENG +QVWD RK SQP+LK  AH   +++IDWHP    VIA+G RDR V+
Sbjct:    7 ASVRASMDFNGPLNALSTSPNNRLIAVGGRDVLKVVALEASGFTEKRNLRVAGKPSLNFSTNDIRWHPQSDYLLATAATNGAVVIWNLEREGYKHVQERVLNGHRRAVNRICWHTTDWNVLISGSQDGTVKLWDKRGGK--VVSTYQPKSESVRDVRASPFHPNKFAAAFENGIVQVWDMRKNSQPELKFTAHKGLVLSIDWHPTDANVIASGGRDRYVK 224          
BLAST of jgi.p|Trimin1|168533 vs. uniprot
Match: A0A024GBD5_9STRA (Uncharacterized protein n=7 Tax=Albugo candida TaxID=65357 RepID=A0A024GBD5_9STRA)

HSP 1 Score: 197 bits (502), Expect = 6.210e-55
Identity = 99/238 (41.60%), Postives = 150/238 (63.03%), Query Frame = 0
Query:    2 ETSAGVVAELDLGCPLTSLCLSPNLQYCAVGARDVVKVLDLGPEGFAEVKTLSITTKGSIKFSITDVSWSAMDSGLVAAAMNNGGIVVWDVLPSHH------------------SERVMVEHQRTVNRVAWHPSEPALLLSCSMDNSIKLWDRRGRTHHCAVTFRPRSEAVRDVQFSPFQPHRFAAAFENGQLQVWDRRKVSQPQLKIMAHSQPIMAIDWHPMRDWVIATGSRDRTVR 221
            ++++ V + +D   PL +L +SPN +  AVG RDV++++ L   GF+E + L    K S+ FS  D+ W    + L+A A  NG +V+W++    +                  SERV+  H+R VNR+ WHP++  LL+S S D +IKLWD+RG+  +    ++PRSE+VRDV+FS FQP+RFAAAFENG +Q+WD RK + P+LK  AH   ++++DWHP R  ++A+G RDR V+
Sbjct:   11 KSASSVRSSVDFNGPLNALAISPNNKLVAVGGRDVLRIMALEAMGFSEKRNLR-AGKSSLNFSTNDIRWHPQSNHLLATAATNGVVVIWNLQKDGYKHVQGTFCDRNRHCIDSVSERVLNGHRRAVNRICWHPTDWNLLVSGSQDGTIKLWDKRGKAGN---VYQPRSESVRDVRFSHFQPNRFAAAFENGIIQIWDIRKNAHPELKFTAHKGLVLSVDWHPNRSNIVASGGRDRYVK 244          
BLAST of jgi.p|Trimin1|168533 vs. uniprot
Match: M4BGE8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BGE8_HYAAE)

HSP 1 Score: 197 bits (502), Expect = 7.450e-55
Identity = 98/221 (44.34%), Postives = 141/221 (63.80%), Query Frame = 0
Query:    4 SAGVVAELDLGCPLTSLCLSPNLQYCAVGARDVVKVLDLGPEGFAEVKTLSITTKGSIKFSITDVSWSAMDSGLVAAAMNNGGIVVWDVLPS---HHSERVMVEHQRTVNRVAWHPSEPALLLSCSMDNSIKLWDRRGRTHHCAVTFRPRSEAVRDVQFSPFQPHRFAAAFENGQLQVWDRRKVSQPQLKIMAHSQPIMAIDWHPMRDWVIATGSRDRTVR 221
            ++ V A +D   PL +L  SPN +  AVG RDV+KV+ L   GF E + L +  K S+ FS  D+ W    + L+A A  NG + +W++      H  ERV+  H+R VNR+ WH ++  +L+S S D ++KLWD+RG       T++P+SE+VRDV+ SPF P++FAAAFENG +QVWD RK +QP+LK  AH   ++ +DWHP    V+A+G RDR V+
Sbjct:    2 ASSVRASMDFNGPLNALSTSPNNRLIAVGGRDVLKVVALEASGFTEKRNLRVVGKPSLNFSTNDIRWHPHSAYLLATAATNGAVGIWNLERDGYKHVQERVLNGHRRAVNRICWHTTDWNVLISGSQDGTVKLWDKRGGK--VVSTYQPKSESVRDVRASPFHPNKFAAAFENGIVQVWDMRKNTQPELKFTAHKGLVLTVDWHPTNANVLASGGRDRYVK 220          
BLAST of jgi.p|Trimin1|168533 vs. uniprot
Match: D0N6V5_PHYIT (ANAPC4_WD40 domain-containing protein n=20 Tax=Phytophthora TaxID=4783 RepID=D0N6V5_PHYIT)

HSP 1 Score: 197 bits (500), Expect = 1.520e-54
Identity = 101/223 (45.29%), Postives = 139/223 (62.33%), Query Frame = 0
Query:    2 ETSAGVVAELDLGCPLTSLCLSPNLQYCAVGARDVVKVLDLGPEGFAEVKTLSITTKGSIKFSITDVSWSAMDSGLVAAAMNNGGIVVWDVLPS---HHSERVMVEHQRTVNRVAWHPSEPALLLSCSMDNSIKLWDRRGRTHHCAVTFRPRSEAVRDVQFSPFQPHRFAAAFENGQLQVWDRRKVSQPQLKIMAHSQPIMAIDWHPMRDWVIATGSRDRTVR 221
              +A V A +D   PL +L  SPN +  AVG RDV+KV+ L   GF E + L +  K S+ FS  D+ W      L+A A  NG +V+W++      H  ERV   H+R VNR+ WH S+  +L+S S D ++KLWD+RG       T++P+SE+VRDV+ SPF  ++FAAAFENG +QVWD RK SQ +LK  AH   +++IDWHP    V+A+G RDR V+
Sbjct:    4 RAAASVRASMDFNGPLNALSTSPNNRLIAVGGRDVLKVVALEASGFTEKRNLRVVGKPSLNFSTNDIRWHPHSDYLLATAATNGAVVIWNLERDGYKHVQERVFNGHRRAVNRICWHTSDWNVLISGSQDGTVKLWDKRGGK--VVSTYQPKSESVRDVRASPFHSNKFAAAFENGIVQVWDMRKNSQAELKFTAHKGLVLSIDWHPTDANVLASGGRDRYVK 224          
BLAST of jgi.p|Trimin1|168533 vs. uniprot
Match: A0A3M6VR55_9STRA (ANAPC4_WD40 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VR55_9STRA)

HSP 1 Score: 196 bits (499), Expect = 2.310e-54
Identity = 100/220 (45.45%), Postives = 139/220 (63.18%), Query Frame = 0
Query:    5 AGVVAELDLGCPLTSLCLSPNLQYCAVGARDVVKVLDLGPEGFAEVKTLSITTKGSIKFSITDVSWSAMDSGLVAAAMNNGGIVVWDVLPS---HHSERVMVEHQRTVNRVAWHPSEPALLLSCSMDNSIKLWDRRGRTHHCAVTFRPRSEAVRDVQFSPFQPHRFAAAFENGQLQVWDRRKVSQPQLKIMAHSQPIMAIDWHPMRDWVIATGSRDRTVR 221
            A V A +D   PL +L  SPN    AVG RDV+KV+ L   GF E + L +  K S+ FS  D+ W      L+A A  NG +V+W++      H  ERV+  H+R VNR+ WH ++  +L+S S D ++KLWD+RG       T++P+SE+VRDV+ SPF  ++FAAAFENG +QVWD RK +QP+LK  AH   +++IDWHP    V+A+G RDR V+
Sbjct:    9 ASVRASMDFNGPLNALSTSPNNHLIAVGGRDVLKVVALEAAGFTEKRNLRVIGKPSLNFSTNDIRWHPHSDYLLATAATNGAVVIWNLERDGYKHVQERVLNGHRRAVNRICWHTTDWNVLISGSQDGTVKLWDKRGGK--VVSTYQPKSESVRDVRASPFHSNKFAAAFENGIVQVWDMRKNTQPELKFTAHKGLVLSIDWHPTDANVLASGGRDRYVK 226          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|168533 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YP21_9STRA1.730e-162100.00WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A5D6XR99_9STRA3.580e-6047.96Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6A3M4F6_9STRA1.410e-5745.54ANAPC4_WD40 domain-containing protein n=1 Tax=Phyt... [more]
G4YXX7_PHYSP6.330e-5745.74ANAPC4_WD40 domain-containing protein n=4 Tax=Phyt... [more]
A0A0P1AC50_PLAHL6.780e-5745.95Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
A0A225WIZ9_9STRA9.050e-5746.82ANAPC4_WD40 domain-containing protein n=1 Tax=Phyt... [more]
A0A024GBD5_9STRA6.210e-5541.60Uncharacterized protein n=7 Tax=Albugo candida Tax... [more]
M4BGE8_HYAAE7.450e-5544.34Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
D0N6V5_PHYIT1.520e-5445.29ANAPC4_WD40 domain-containing protein n=20 Tax=Phy... [more]
A0A3M6VR55_9STRA2.310e-5445.45ANAPC4_WD40 domain-containing protein n=1 Tax=Pero... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 184..219
e-value: 4.2
score: 13.1
coord: 140..180
e-value: 0.0034
score: 26.6
coord: 4..41
e-value: 53.0
score: 6.1
coord: 46..91
e-value: 6.3
score: 11.9
coord: 95..135
e-value: 5.9E-8
score: 42.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 191..221
score: 9.305395
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 102..135
score: 12.480124
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 47..221
e-value: 1.6E-40
score: 141.4
IPR013979Translation initiation factor, beta propellor-like domainPFAMPF08662eIF2Acoord: 95..213
e-value: 8.8E-6
score: 25.7
IPR037590GATOR complex protein WDR24PANTHERPTHR46200GATOR COMPLEX PROTEIN WDR24coord: 10..221
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 102..135
score: 10.390142
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 191..221
score: 9.203785
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 14..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_58contigContig_58:263519..265706 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168533mRNA_9389Tribonema minus UTEX_B_3156 mRNAContig_58 263519..265706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|168533|e_gw1.58.29.1 ID=Trimin1|168533|e_gw1.58.29.1|Name=jgi.p|Trimin1|168533|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=222bp
METSAGVVAELDLGCPLTSLCLSPNLQYCAVGARDVVKVLDLGPEGFAEV
KTLSITTKGSIKFSITDVSWSAMDSGLVAAAMNNGGIVVWDVLPSHHSER
VMVEHQRTVNRVAWHPSEPALLLSCSMDNSIKLWDRRGRTHHCAVTFRPR
SEAVRDVQFSPFQPHRFAAAFENGQLQVWDRRKVSQPQLKIMAHSQPIMA
IDWHPMRDWVIATGSRDRTVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR013979TIF_beta_prop-like
IPR037590WDR24
IPR036322WD40_repeat_dom_sf