Trimin1|168316|e_gw1.57.124.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|168316
Unique NameTrimin1|168316|e_gw1.57.124.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length208
Homology
BLAST of jgi.p|Trimin1|168316 vs. uniprot
Match: A0A835YQT6_9STRA (LisH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT6_9STRA)

HSP 1 Score: 405 bits (1040), Expect = 1.120e-142
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
Query:    1 MAQEAQVLEADDAPLQQEGAAGTLDDLKDALVDALESSGALGKLRARVRAEVFKSLEPEELATRETAPPLSNANLIINELIRDYFEYNGYSHALSVFLSESCQPDDASLSRGFIRDELGVSEELDSARQKQLPLLYGILHMLQKWKRDSEQQPALEGPQASPQGTDVLSAAYCMWNCSDLTRMAVHQLACNRSLCDVAVQIGWLRQP 207
            MAQEAQVLEADDAPLQQEGAAGTLDDLKDALVDALESSGALGKLRARVRAEVFKSLEPEELATRETAPPLSNANLIINELIRDYFEYNGYSHALSVFLSESCQPDDASLSRGFIRDELGVSEELDSARQKQLPLLYGILHMLQKWKRDSEQQPALEGPQASPQGTDVLSAAYCMWNCSDLTRMAVHQLACNRSLCDVAVQIGWLRQP
Sbjct:    1 MAQEAQVLEADDAPLQQEGAAGTLDDLKDALVDALESSGALGKLRARVRAEVFKSLEPEELATRETAPPLSNANLIINELIRDYFEYNGYSHALSVFLSESCQPDDASLSRGFIRDELGVSEELDSARQKQLPLLYGILHMLQKWKRDSEQQPALEGPQASPQGTDVLSAAYCMWNCSDLTRMAVHQLACNRSLCDVAVQIGWLRQP 207          
BLAST of jgi.p|Trimin1|168316 vs. uniprot
Match: D7FVJ9_ECTSI (Similar to chemokine (C-C motif) receptor 6a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ9_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 2.670e-40
Identity = 81/136 (59.56%), Postives = 102/136 (75.00%), Query Frame = 0
Query:   18 EGAAGTLDDLKDALVDALESSGALGKLRARVRAEVFKSLE-PEELATRETAPPLSNANLIINELIRDYFEYNGYSHALSVFLSESCQPDDASLSRGFIRDELGVSEELDSARQ---KQLPLLYGILHMLQKWKRDS 149
            EG  GT+DDLK ALV+ LE  G LGKLRA+VRAEVF +LE P+E   R    PLSN NL+INEL+RDY  YNGY++AL VF++ES QP + SL RGFIRDELG+SE LDS  +   + LPLLYGI H L++ ++++
Sbjct:   16 EGGDGTIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQE---RVLPTPLSNDNLLINELVRDYLSYNGYANALGVFMAESGQPIERSLDRGFIRDELGLSERLDSIDRGGARPLPLLYGITHALKRRRKEA 148          
BLAST of jgi.p|Trimin1|168316 vs. uniprot
Match: A0A6H5KW76_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW76_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 1.650e-39
Identity = 79/135 (58.52%), Postives = 98/135 (72.59%), Query Frame = 0
Query:   18 EGAAGTLDDLKDALVDALESSGALGKLRARVRAEVFKSLEPEELATRETAPPLSNANLIINELIRDYFEYNGYSHALSVFLSESCQPDDASLSRGFIRDELGVSEELDSARQ---KQLPLLYGILHMLQKWKRDS 149
            EG  GT+DDLK ALV+ LE  G LGKLRA+VRAEVF +LE  +     T  PLSN NL+INEL+RDY  YNGYS+AL VF++ES QP + SL RGFIRDELG+SE  DS      + LPLLYGI H L++ ++++
Sbjct:   16 EGGDGTIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQEGVLPT--PLSNENLLINELVRDYLSYNGYSNALGVFMAESGQPIERSLDRGFIRDELGLSERRDSTDHGSARPLPLLYGITHALKRRRKEA 148          
BLAST of jgi.p|Trimin1|168316 vs. uniprot
Match: F0WR59_9STRA (PREDICTED: similar to predicted protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WR59_9STRA)

HSP 1 Score: 122 bits (307), Expect = 3.640e-32
Identity = 74/148 (50.00%), Postives = 98/148 (66.22%), Query Frame = 0
Query:   23 TLDDLKDALVDALESSGALGKLRARVRAEVFKSLEPEELATRETAPPLSNANLIINELIRDYFEYNGYSHALSVFLSESCQPDDASLSRGFIRDELGVSEELDSARQKQLPLLYGILHMLQKWKRDSEQQPALEGPQASPQGTDVLSA 170
            +L +LK+ L D LES GALG+++AR+RAE+F +L+ + +      P LSN NLI+NELIR+Y EYNGY HALSVFL ES QP +    R FI  ELGV    D A+  Q+PLLY IL +LQ+ +  S     L+G   +P+G +VL A
Sbjct:    8 SLSELKEVLKDTLESRGALGQIKARIRAEIFSALDDQSIPK----PELSNENLILNELIREYLEYNGYRHALSVFLPESGQPLEKPFPRSFISSELGVR---DDAQFTQVPLLYNILLILQQRREKS-----LKGAHETPKG-NVLDA 142          
BLAST of jgi.p|Trimin1|168316 vs. uniprot
Match: A0A024GKL4_9STRA (LisH domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GKL4_9STRA)

HSP 1 Score: 122 bits (305), Expect = 7.720e-32
Identity = 68/142 (47.89%), Postives = 96/142 (67.61%), Query Frame = 0
Query:   23 TLDDLKDALVDALESSGALGKLRARVRAEVFKSLEPEELATRETAPPLSNANLIINELIRDYFEYNGYSHALSVFLSESCQPDDASLSRGFIRDELGVSEELDSARQKQLPLLYGILHMLQKWKRDSEQQPALEGPQASPQG 164
            +L +LK+ L + LE+ G LG+++AR+RAE+F +L+ + +      P LSN NLI+NELIR+Y EYNGY HALSVFL ES QP + +  R F+  ELGV E+   AR  Q+PLLY IL +LQ+ +R++  + A E  +   QG
Sbjct:    7 SLSELKEVLKETLETRGCLGQIKARIRAEIFSALDDQSIPK----PELSNENLILNELIREYLEYNGYRHALSVFLPESGQPTEKAFPRSFLSSELGVRED---ARFTQIPLLYNILFILQQ-RRENNAKGAQEDRELDTQG 140          
BLAST of jgi.p|Trimin1|168316 vs. uniprot
Match: W2LRN2_PHYPR (LisH domain-containing protein n=9 Tax=Phytophthora parasitica TaxID=4792 RepID=W2LRN2_PHYPR)

HSP 1 Score: 119 bits (299), Expect = 1.700e-30
Identity = 69/138 (50.00%), Postives = 93/138 (67.39%), Query Frame = 0
Query:   15 LQQEGAAGTLDDLKDALVDALESSGALGKLRARVRAEVFKSLEPEELATRETAPPLSNANLIINELIRDYFEYNGYSHALSVFLSESCQPDDASLSRGFIRDELGVSEELDSARQKQLPLLYGILHMLQKWKRDSEQQ 152
            L  +G   TL DLK+ L D L + G+L +++AR+RAE+F +L+ +++      P LSN NLIINELIR+YFEYNGY HALSVFL ES QP +    R F+ +EL V+E+    R   +PLLY I+  LQ+ KR+ EQQ
Sbjct:    3 LNADGGQATLSDLKEVLKDTLAARGSLDQIKARIRAEIFAALDDQDVPK----PKLSNENLIINELIREYFEYNGYRHALSVFLPESGQPAEKPFDRQFLSNELNVTED---PRFTHVPLLYSIVASLQQ-KRNQEQQ 132          
BLAST of jgi.p|Trimin1|168316 vs. uniprot
Match: A0A1V9YC06_9STRA (LisH domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YC06_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.910e-30
Identity = 72/144 (50.00%), Postives = 94/144 (65.28%), Query Frame = 0
Query:   23 TLDDLKDALVDALESSGALGKLRARVRAEVFKSLEPEELATRETAPPLSNANLIINELIRDYFEYNGYSHALSVFLSESCQPDDASLSRGFIRDELGVSEELDSARQKQLPLLYGILHMLQKWKR----DSEQQPALEGPQASP 162
            +L DLKDAL + LE+ G LG ++AR+RAE+F++L+  E AT+   P LSN NLIINELIR+Y EYNGY H LSVFL ES QP +    R F+  EL ++E+    R  Q+PLLYGI+  LQ  K     D  + PA   P ++P
Sbjct:    6 SLADLKDALKETLEARGTLGPIKARLRAEIFQALD--EGATK---PKLSNENLIINELIREYLEYNGYRHTLSVFLPESGQPQERPFQRRFLAHELNITED---PRYNQVPLLYGIVTALQDAKASNQGDGSRNPATLRPSSTP 141          
BLAST of jgi.p|Trimin1|168316 vs. uniprot
Match: A0A329SX33_9STRA (LisH domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SX33_9STRA)

HSP 1 Score: 118 bits (295), Expect = 7.320e-30
Identity = 68/135 (50.37%), Postives = 90/135 (66.67%), Query Frame = 0
Query:   18 EGAAGTLDDLKDALVDALESSGALGKLRARVRAEVFKSLEPEELATRETAPPLSNANLIINELIRDYFEYNGYSHALSVFLSESCQPDDASLSRGFIRDELGVSEELDSARQKQLPLLYGILHMLQKWKRDSEQQ 152
            +G   TL DLK+ L D L + G+L +++AR+RAE+F +L+ +++      P LSN NLIINELIR+YFEYNGY HALSVFL ES QP +    R F+  EL V+E+    R   +PLLY I   LQ+ KR+ EQQ
Sbjct:    4 DGGQATLSDLKEVLKDTLAARGSLDQIKARIRAEIFAALDDQDVPK----PKLSNENLIINELIREYFEYNGYRHALSVFLPESGQPAEKPFDRQFLSSELNVTED---PRFTHVPLLYSIAASLQQ-KRNQEQQ 130          
BLAST of jgi.p|Trimin1|168316 vs. uniprot
Match: A0A024UPW3_9STRA (LisH domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UPW3_9STRA)

HSP 1 Score: 118 bits (295), Expect = 9.830e-30
Identity = 71/149 (47.65%), Postives = 95/149 (63.76%), Query Frame = 0
Query:   23 TLDDLKDALVDALESSGALGKLRARVRAEVFKSLEPEELATRETAPP--LSNANLIINELIRDYFEYNGYSHALSVFLSESCQPDDASLSRGFIRDELGVSEELDSARQKQLPLLYGILHMLQKWKRDSEQQPALEGPQASPQGTDVLS 169
            +L DLKDAL D LE+ G++G++RAR+RAE+F++L+       E AP   LSN NLIINELIR+Y EYNGY HALSVF+ ES QP +    R F+  EL ++E+    R  Q+PLLY I+  LQ+ KR     P ++ P+      D  S
Sbjct:    6 SLSDLKDALKDTLEARGSMGQIRARIRAEIFQALD-------EGAPKAKLSNENLIINELIREYMEYNGYRHALSVFVPESGQPVEKPFHRRFLAHELNITED---PRYAQVPLLYSIITALQESKR-----PVIDPPRRQSTNDDAQS 139          
BLAST of jgi.p|Trimin1|168316 vs. uniprot
Match: W4GLP1_9STRA (LisH domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GLP1_9STRA)

HSP 1 Score: 119 bits (297), Expect = 9.930e-30
Identity = 69/132 (52.27%), Postives = 90/132 (68.18%), Query Frame = 0
Query:   23 TLDDLKDALVDALESSGALGKLRARVRAEVFKSLEPEELATRETAPP--LSNANLIINELIRDYFEYNGYSHALSVFLSESCQPDDASLSRGFIRDELGVSEELDSARQKQLPLLYGILHMLQKWKRDSEQQ 152
            +L DLKDAL D LE+ G++G++RAR+RAE+F++L+       E AP   LSN NLIINELIR+Y EYNGY HALSVF+ ES QP +    R F+  EL ++E+    R  Q+PLLY IL  LQ  K  +E+Q
Sbjct:    6 SLSDLKDALKDTLEARGSMGQIRARIRAEIFQALD-------EGAPKAKLSNENLIINELIREYMEYNGYRHALSVFVPESGQPVEKPFHRRFLAHELNITED---PRYTQVPLLYSILTALQDSKHPTEEQ 127          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|168316 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YQT6_9STRA1.120e-142100.00LisH domain-containing protein n=1 Tax=Tribonema m... [more]
D7FVJ9_ECTSI2.670e-4059.56Similar to chemokine (C-C motif) receptor 6a n=1 T... [more]
A0A6H5KW76_9PHAE1.650e-3958.52LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
F0WR59_9STRA3.640e-3250.00PREDICTED: similar to predicted protein putative n... [more]
A0A024GKL4_9STRA7.720e-3247.89LisH domain-containing protein n=1 Tax=Albugo cand... [more]
W2LRN2_PHYPR1.700e-3050.00LisH domain-containing protein n=9 Tax=Phytophthor... [more]
A0A1V9YC06_9STRA1.910e-3050.00LisH domain-containing protein n=1 Tax=Achlya hypo... [more]
A0A329SX33_9STRA7.320e-3050.37LisH domain-containing protein n=1 Tax=Phytophthor... [more]
A0A024UPW3_9STRA9.830e-3047.65LisH domain-containing protein n=1 Tax=Aphanomyces... [more]
W4GLP1_9STRA9.930e-3052.27LisH domain-containing protein n=2 Tax=Aphanomyces... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.960.40coord: 49..141
e-value: 1.2E-9
score: 40.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR15431FGFR1 ONCOGENE PARTNER/LISH DOMAIN-CONTAINING PROTEINcoord: 25..142
NoneNo IPR availablePANTHERPTHR15431:SF4LISH DOMAIN-CONTAINING PROTEIN FOPNLcoord: 25..142
IPR018993FGFR1 oncogene partner (FOP), N-terminal dimerisation domainPFAMPF09398FOP_dimercoord: 75..139
e-value: 1.0E-9
score: 38.5
IPR006594LIS1 homology motifPROSITEPS50896LISHcoord: 73..105
score: 8.722868

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_57contigContig_57:793815..796347 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168316mRNA_8652Tribonema minus UTEX_B_3156 mRNAContig_57 793815..796347 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|168316|e_gw1.57.124.1 ID=Trimin1|168316|e_gw1.57.124.1|Name=jgi.p|Trimin1|168316|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=208bp
MAQEAQVLEADDAPLQQEGAAGTLDDLKDALVDALESSGALGKLRARVRA
EVFKSLEPEELATRETAPPLSNANLIINELIRDYFEYNGYSHALSVFLSE
SCQPDDASLSRGFIRDELGVSEELDSARQKQLPLLYGILHMLQKWKRDSE
QQPALEGPQASPQGTDVLSAAYCMWNCSDLTRMAVHQLACNRSLCDVAVQ
IGWLRQP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018993FOP_dimerisation-dom_N
IPR006594LisH