Trimin1|167920|e_gw1.54.151.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|167920
Unique Name	Trimin1\|167920\|e_gw1.54.151.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	174

Homology

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BLAST of jgi.p|Trimin1|167920 vs. uniprot
Match: A0A836CBA2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBA2_9STRA)

HSP 1 Score: 175 bits (443), Expect = 7.400e-53
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0

Query:    1 MNIDPSNLELQRGGIINLVEMCEHGGAAELLDAGVLPAVMAPMNAHVGDALLQTLGICIITSLLQANVVPAEHFITXXXXXXXXXXXXXXXXXXXXXXXXXICIGDLWSDVTEDRL 116
            MNIDPSNLELQRGGIINLVEMCEHGGAAELLDAGVLPAVMAPMNAHVGDALLQTLGICIITSLLQANVVPAEHFITXXXXXXXXXXXXXXXXXXXXXXXXXICIGDLWSDVTEDRL
Sbjct:    1 MNIDPSNLELQRGGIINLVEMCEHGGAAELLDAGVLPAVMAPMNAHVGDALLQTLGICIITSLLQANVVPAEHFITXXXXXXXXXXXXXXXXXXXXXXXXXICIGDLWSDVTEDRL 116

[Close]

BLAST of jgi.p|Trimin1|167920 vs. uniprot
Match: A0A836CC48_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC48_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.140e-15
Identity = 74/105 (70.48%), Postives = 83/105 (79.05%), Query Frame = 0

Query:   12 RGGIINLVEMCEHGGAAELLDAGVLPAVMAPMNAHVGDALLQTLGICIITSLLQANVVPAEHFITXXXXXXXXXXXXXXXXXXXXXXXXXICIGDLWSDVTEDRL 116
            RG I+ L  +C  G A ELL+AGV+PAVMA MNAHVG A+LQ  GI IIT LLQAN+ P      XXXXXXXXXXXXXXXXXXXXXXXXX+CIG+L+SD TEDRL
Sbjct:    1 RGCIMELTILCNEG-AEELLNAGVIPAVMAAMNAHVGKAVLQRFGIIIITKLLQANI-PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCIGELFSDATEDRL 103

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|167920 vs. uniprot

BLAST of jgi.p|Trimin1|167920 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836CBA2_9STRA	7.400e-53	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A836CC48_9STRA	1.140e-15	70.48	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 4..172 e-value: 2.7E-7 score: 32.1
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 7..156

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_54	contig	Contig_54:286907..287428 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|167920	mRNA_7045	Tribonema minus UTEX_B_3156	mRNA	Contig_54 286907..287428 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|167920|e_gw1.54.151.1 ID=Trimin1|167920|e_gw1.54.151.1|Name=jgi.p|Trimin1|167920|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=174bp
MNIDPSNLELQRGGIINLVEMCEHGGAAELLDAGVLPAVMAPMNAHVGDA
LLQTLGICIITSLLQANVVPAEHFITAGVHRSVVAAMDTNIGDSQLQRTG
VICIGDLWSDVTEDRLIDAGALRAFIAAMDRRVGHTGVQWECLINLAKVW
TDGTAERLINDGMHRAVLASMRIH

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold