Trimin1|167894|e_gw1.54.102.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|167894
Unique NameTrimin1|167894|e_gw1.54.102.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length320
Homology
[Close]
BLAST of jgi.p|Trimin1|167894 vs. uniprot
Match: A0A835YPS7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPS7_9STRA)

HSP 1 Score: 168 bits (426), Expect = 2.170e-46
Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0 
Query:    1 MPQYPSALHTLHISMCPTLTELPESIGELAALETLCLLGCGLXXXXXXXXXXXXXXXXALEDCMALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSVGGKGXXXXXXXXXXXXXXXXXGFYGLQRRIALPNSIRFGQLAALEEFFVRGCGGLDALPYSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHINIAGTRCTSFSVHGCLVVCQ 319
            MPQYPSALHTLHISMCPTLTELPESIGELAALETLCLLGCGLXXXXXXXXXXXXXXXXALEDCMALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSVGGKGXXXXXXXXXXXXXXXXXGFYGLQRRIALPNSIRFGQLAALEEFFVRGCGGLDALPYSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHINIAGTRCTSFSVHGCLVVCQ
Sbjct:    1 MPQYPSALHTLHISMCPTLTELPESIGELAALETLCLLGCGLXXXXXXXXXXXXXXXXALEDCMALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSVGGKGXXXXXXXXXXXXXXXXXGFYGLQRRIALPNSIRFGQLAALEEFFVRGCGGLDALPYSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHINIAGTRCTSFSVHGCLVVCQ 319
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|167894 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YPS7_9STRA2.170e-46100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 3..111
e-value: 5.8E-21
score: 76.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 113..311
e-value: 3.3E-46
score: 159.2
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 8..154
coord: 90..184
coord: 113..236
coord: 234..308
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 5..308

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_54contigContig_54:299701..300660 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167894mRNA_7049Tribonema minus UTEX_B_3156 mRNAContig_54 299701..300660 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|167894|e_gw1.54.102.1 ID=Trimin1|167894|e_gw1.54.102.1|Name=jgi.p|Trimin1|167894|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=320bp
MPQYPSALHTLHISMCPTLTELPESIGELAALETLCLLGCGLTALPDSIG
QLTALRRLALEDCMALTALPDSIGQLTALQTLTIDGCTALTALPDSICEL
AALTELTIDACWGLTALPDGIHQLAALKSLSVGGKGLTVLPDSIGQLAAL
ETLGFYGLQRRIALPNSIRFGQLAALEEFFVRGCGGLDALPYSIGQLTAL
KTLDIMNCRRLTELPDSICQLTALETLIVCGCQGLTALPDSIGQLAALRN
LVVRKCEALTALPESIGQLAALRKLEVRNCDALTALPASIGQLPALQHIN
IAGTRCTSFSVHGCLVVCQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf