Trimin1|167855|e_gw1.54.22.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|167855
Unique Name	Trimin1\|167855\|e_gw1.54.22.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	108

Homology

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BLAST of jgi.p|Trimin1|167855 vs. uniprot
Match: A0A835YYZ1_9STRA (Histone H4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYZ1_9STRA)

HSP 1 Score: 210 bits (534), Expect = 8.910e-69
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0

Query:    1 MSGVTKRGKCGVRKRGFVRHRKALRDSILGITKPAIRRLCRRGGVRRISGLIYEQMRGVLRVFMENVLRDAVTCTEHGRRKTVSALDVVYALKGQGRQLYGFGSETA 107
            MSGVTKRGKCGVRKRGFVRHRKALRDSILGITKPAIRRLCRRGGVRRISGLIYEQMRGVLRVFMENVLRDAVTCTEHGRRKTVSALDVVYALKGQGRQLYGFGSETA
Sbjct:    1 MSGVTKRGKCGVRKRGFVRHRKALRDSILGITKPAIRRLCRRGGVRRISGLIYEQMRGVLRVFMENVLRDAVTCTEHGRRKTVSALDVVYALKGQGRQLYGFGSETA 107

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BLAST of jgi.p|Trimin1|167855 vs. uniprot
Match: A0A250WY95_9CHLO (Histone H4 n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WY95_9CHLO)

HSP 1 Score: 148 bits (374), Expect = 2.230e-44
Identity = 79/107 (73.83%), Postives = 90/107 (84.11%), Query Frame = 0

Query:    1 MSGVTKRGKCGVRKRGFVRHRKALRDSILGITKPAIRRLCRRGGVRRISGLIYEQMRGVLRVFMENVLRDAVTCTEHGRRKTVSALDVVYALKGQGRQLYGFGSETA 107
            MSG  K GK G+ K G  RHRK LRD+I GITKPAIRRL RRGGV+RISGLIYE+ RGVL+VF+EN++RDAVT TEH RRKTV+ALDVVYALK QGR LYGFG +T+
Sbjct:    1 MSGRGKGGK-GLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENIIRDAVTYTEHARRKTVTALDVVYALKRQGRTLYGFGGDTS 106

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BLAST of jgi.p|Trimin1|167855 vs. uniprot
Match: A0A5B6VRJ0_9ROSI (Histone H4 n=2 Tax=rosids TaxID=71275 RepID=A0A5B6VRJ0_9ROSI)

HSP 1 Score: 147 bits (372), Expect = 4.360e-44
Identity = 79/106 (74.53%), Postives = 89/106 (83.96%), Query Frame = 0

Query:    1 MSGVTKRGKCGVRKRGFVRHRKALRDSILGITKPAIRRLCRRGGVRRISGLIYEQMRGVLRVFMENVLRDAVTCTEHGRRKTVSALDVVYALKGQGRQLYGFGSET 106
            MSG  K GK G+ K G  RHRK LRD+I GITKPAIRRL RRGGV+RISGLIYE+ RGVL++F+ENV+RDAVT TEH RRKTV+A+DVVYALK QGR LYGFG ET
Sbjct:    1 MSGRGKGGK-GLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGVET 105

[Close]

BLAST of jgi.p|Trimin1|167855 vs. uniprot
Match: A0A7H4LLP7_WHEAT (Histone H4 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A7H4LLP7_WHEAT)

HSP 1 Score: 146 bits (369), Expect = 1.250e-43
Identity = 78/105 (74.29%), Postives = 88/105 (83.81%), Query Frame = 0

Query:    1 MSGVTKRGKCGVRKRGFVRHRKALRDSILGITKPAIRRLCRRGGVRRISGLIYEQMRGVLRVFMENVLRDAVTCTEHGRRKTVSALDVVYALKGQGRQLYGFGSE 105
            MSG  K GK G+ K G  RHRK LRD+I GITKPAIRRL RRGGV+RISGLIYE+ RGVL++F+ENV+RDAVT TEH RRKTV+A+DVVYALK QGR LYGFG E
Sbjct:    1 MSGRDKGGK-GLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGDE 104

[Close]

BLAST of jgi.p|Trimin1|167855 vs. uniprot
Match: A0A7J6IAQ5_CANSA (Histone H4 n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A7J6IAQ5_CANSA)

HSP 1 Score: 146 bits (369), Expect = 1.550e-43
Identity = 78/103 (75.73%), Postives = 88/103 (85.44%), Query Frame = 0

Query:    1 MSGVTKRGKCGVRKRGFVRHRKALRDSILGITKPAIRRLCRRGGVRRISGLIYEQMRGVLRVFMENVLRDAVTCTEHGRRKTVSALDVVYALKGQGRQLYGFG 103
            MSG  K GK G+ K G  RHRK LRD+I GITKPAIRRL RRGGV+RISGLIYE+ RGVL++F+ENV+RDAVT TEHGRRKTV+A+DVVYALK QGR LYGFG
Sbjct:    1 MSGRGKGGK-GLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHGRRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of jgi.p|Trimin1|167855 vs. uniprot
Match: A0A250X5X8_9CHLO (Histone H4 n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X5X8_9CHLO)

HSP 1 Score: 147 bits (371), Expect = 1.560e-43
Identity = 80/107 (74.77%), Postives = 88/107 (82.24%), Query Frame = 0

Query:    1 MSGVTKRGKCGVRKRGFVRHRKALRDSILGITKPAIRRLCRRGGVRRISGLIYEQMRGVLRVFMENVLRDAVTCTEHGRRKTVSALDVVYALKGQGRQLYGFGSETA 107
            MSG  K GK G+ K G  RHRK LRD+I GITKPAIRRL RRGGV+RISGLIYE+ RGVL+VF+ENV+RDAVT TEH RRKTV+ALDVVYALK QGR LYGFG   A
Sbjct:    1 MSGRGKGGK-GLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTALDVVYALKRQGRTLYGFGERAA 106

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BLAST of jgi.p|Trimin1|167855 vs. uniprot
Match: E1B7N2_BOVIN (Histone H4 n=3 Tax=Bos TaxID=9903 RepID=E1B7N2_BOVIN)

HSP 1 Score: 145 bits (367), Expect = 2.300e-43
Identity = 78/103 (75.73%), Postives = 88/103 (85.44%), Query Frame = 0

Query:    1 MSGVTKRGKCGVRKRGFVRHRKALRDSILGITKPAIRRLCRRGGVRRISGLIYEQMRGVLRVFMENVLRDAVTCTEHGRRKTVSALDVVYALKGQGRQLYGFG 103
            MSG  K GK G+ K G  RHRK LRD+I GITKPAIRRL RRGGV+RISGLIYE+MRGVL+VF+ENV+RDAVT TEH +RKTV+A+DVVYALK QGR LYGFG
Sbjct:    1 MSGRGKGGK-GLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEEMRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of jgi.p|Trimin1|167855 vs. uniprot
Match: A0A3B6CBA0_WHEAT (Histone H4 n=2 Tax=Triticum TaxID=4564 RepID=A0A3B6CBA0_WHEAT)

HSP 1 Score: 145 bits (367), Expect = 2.300e-43
Identity = 77/103 (74.76%), Postives = 88/103 (85.44%), Query Frame = 0

Query:    1 MSGVTKRGKCGVRKRGFVRHRKALRDSILGITKPAIRRLCRRGGVRRISGLIYEQMRGVLRVFMENVLRDAVTCTEHGRRKTVSALDVVYALKGQGRQLYGFG 103
            MSG+ K GK G+ K G  RHRK LRD+I GITKPAIRRL RRGGV+RISGLIYE+ RGVL++F+ENV+RDAVT TEH RRKTV+A+DVVYALK QGR LYGFG
Sbjct:    1 MSGLGKGGK-GLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of jgi.p|Trimin1|167855 vs. uniprot
Match: A0A4Y7JY77_PAPSO (Histone H4 n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A4Y7JY77_PAPSO)

HSP 1 Score: 145 bits (367), Expect = 3.220e-43
Identity = 77/106 (72.64%), Postives = 89/106 (83.96%), Query Frame = 0

Query:    1 MSGVTKRGKCGVRKRGFVRHRKALRDSILGITKPAIRRLCRRGGVRRISGLIYEQMRGVLRVFMENVLRDAVTCTEHGRRKTVSALDVVYALKGQGRQLYGFGSET 106
            MSG  K GK G+ K G  RHRK LRD+I GITKPAIRRL RRGGV+RISGLIYE+ RGVL++F+ENV+RDAVT TEH RRKTV+A+DVVYALK QGR LYGFG++ 
Sbjct:    1 MSGRGKGGK-GLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGAQA 105

[Close]

BLAST of jgi.p|Trimin1|167855 vs. uniprot
Match: A0A7S3RVL2_9SPIT (Histone H4 (Fragment) n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3RVL2_9SPIT)

HSP 1 Score: 145 bits (366), Expect = 3.360e-43
Identity = 78/105 (74.29%), Postives = 88/105 (83.81%), Query Frame = 0

Query:    1 MSGVTKRGKCGVRKRGFVRHRKALRDSILGITKPAIRRLCRRGGVRRISGLIYEQMRGVLRVFMENVLRDAVTCTEHGRRKTVSALDVVYALKGQGRQLYGFGSE 105
            MSG  K GK G+ K G  RHRK LRD+I GITKPAIRRL RRGGV+RISGLIYE+ RGVL+VF+ENV+RDAVT TEH RRKTV+A+DVVYALK QGR LYGFG +
Sbjct:    1 MSGRGKGGK-GLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGGQ 104

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|167855 vs. uniprot

BLAST of jgi.p|Trimin1|167855 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YYZ1_9STRA	8.910e-69	100.00	Histone H4 n=1 Tax=Tribonema minus TaxID=303371 Re...	[more]
A0A250WY95_9CHLO	2.230e-44	73.83	Histone H4 n=1 Tax=Chlamydomonas eustigma TaxID=11...	[more]
A0A5B6VRJ0_9ROSI	4.360e-44	74.53	Histone H4 n=2 Tax=rosids TaxID=71275 RepID=A0A5B6...	[more]
A0A7H4LLP7_WHEAT	1.250e-43	74.29	Histone H4 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A7...	[more]
A0A7J6IAQ5_CANSA	1.550e-43	75.73	Histone H4 n=1 Tax=Cannabis sativa TaxID=3483 RepI...	[more]
A0A250X5X8_9CHLO	1.560e-43	74.77	Histone H4 n=1 Tax=Chlamydomonas eustigma TaxID=11...	[more]
E1B7N2_BOVIN	2.300e-43	75.73	Histone H4 n=3 Tax=Bos TaxID=9903 RepID=E1B7N2_BOV...	[more]
A0A3B6CBA0_WHEAT	2.300e-43	74.76	Histone H4 n=2 Tax=Triticum TaxID=4564 RepID=A0A3B...	[more]
A0A4Y7JY77_PAPSO	3.220e-43	72.64	Histone H4 n=2 Tax=Mesangiospermae TaxID=1437183 R...	[more]
A0A7S3RVL2_9SPIT	3.360e-43	74.29	Histone H4 (Fragment) n=2 Tax=Sar TaxID=2698737 Re...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001951	Histone H4	PRINTS	PR00623	HISTONEH4	coord: 41..61 score: 75.91 coord: 63..77 score: 75.69 coord: 90..101 score: 81.62 coord: 78..90 score: 70.81 coord: 21..40 score: 77.5
IPR001951	Histone H4	SMART	SM00417	h44	coord: 19..91 e-value: 9.4E-21 score: 84.9
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 2..104 e-value: 7.7E-42 score: 143.6
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 5..103
None	No IPR available	PANTHER	PTHR10484	HISTONE H4	coord: 1..103
None	No IPR available	PANTHER	PTHR10484:SF185	HISTONE H4	coord: 1..103

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_54	contig	Contig_54:163152..163475 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|167855	mRNA_7018	Tribonema minus UTEX_B_3156	mRNA	Contig_54 163152..163475 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|167855|e_gw1.54.22.1 ID=Trimin1|167855|e_gw1.54.22.1|Name=jgi.p|Trimin1|167855|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=108bp
MSGVTKRGKCGVRKRGFVRHRKALRDSILGITKPAIRRLCRRGGVRRISG
LIYEQMRGVLRVFMENVLRDAVTCTEHGRRKTVSALDVVYALKGQGRQLY
GFGSETA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001951	Histone_H4
IPR009072	Histone-fold