Trimin1|167656|e_gw1.52.93.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|167656
Unique Name	Trimin1\|167656\|e_gw1.52.93.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	334

Homology

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BLAST of jgi.p|Trimin1|167656 vs. uniprot
Match: A0A835YYE4_9STRA (Armadillo-type protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYE4_9STRA)

HSP 1 Score: 398 bits (1022), Expect = 7.520e-136
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0

Query:    1 GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHSHIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEKISGKKM 333
            GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHSHIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEKISGKKM
Sbjct:    1 GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHSHIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEKISGKKM 333

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BLAST of jgi.p|Trimin1|167656 vs. uniprot
Match: D7FWZ0_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWZ0_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 5.150e-77
Identity = 265/333 (79.58%), Postives = 282/333 (84.68%), Query Frame = 0

Query:    1 GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHSHIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEKISGKKM 333
            GHTVQFCRDQHGSRFIQQKLEV+++ +K AFF E++PH QSLM                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VV  TAK EG YLHSHIQFIID F+GQVEKLS HAYGCRVIQRILEHCID Q+  +LEEI++SFS LIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LI HL +GH++G  SLLQVMVCDPYANYVVQKIIDVAD EQR+ II EI+AHAAQLKRYTFGKHIISRLEK+SGKKM
Sbjct:  212 GHTVQFCRDQHGSRFIQQKLEVSTDEDKEAFFNEILPHTQSLMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSTTAKTEGQYLHSHIQFIIDGFVGQVEKLSMHAYGCRVIQRILEHCIDEQKQVILEEIKDSFSVLIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIQHLLYGHSDG-TSLLQVMVCDPYANYVVQKIIDVADQEQRQTIIMEIKAHAAQLKRYTFGKHIISRLEKLSGKKM 543

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BLAST of jgi.p|Trimin1|167656 vs. uniprot
Match: A0A6H5KS31_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS31_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 6.420e-63
Identity = 252/333 (75.68%), Postives = 268/333 (80.48%), Query Frame = 0

Query:    1 GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHSHIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEKISGKKM 333
            GHTVQFCRDQHGSRFIQQKLEV+++ +K AFF E++P                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VV  TAK EG YLHSHIQFIID F+GQVEKLS HAYGCRVIQRILEHCID Q+  +LEEI+          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LI HL +GH++G  SLLQVMVCDPYANYVVQKIIDVAD EQR+ II EI+AHAAQLKRYTFGKHIISRLEK+SGKKM
Sbjct:  507 GHTVQFCRDQHGSRFIQQKLEVSTDEDKEAFFNEILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSTTAKTEGQYLHSHIQFIIDGFVGQVEKLSMHAYGCRVIQRILEHCIDEQKQVILEEIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIQHLLYGHSDG-TSLLQVMVCDPYANYVVQKIIDVADQEQRQTIIMEIKAHAAQLKRYTFGKHIISRLEKLSGKKM 838

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BLAST of jgi.p|Trimin1|167656 vs. uniprot
Match: A0A1V9YTD6_9STRA (PUM-HD domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YTD6_9STRA)

HSP 1 Score: 178 bits (452), Expect = 1.040e-46
Identity = 189/335 (56.42%), Postives = 228/335 (68.06%), Query Frame = 0

Query:    1 GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHS--HIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEKISGKKM 333
            GH V+F +DQHGSRFIQQKLE A    K   F E+ P A SLMTDVFGNYVIQK FD+G P+    L          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++   A A G++  S     FI+ AF+G V  L+TH YGCRVIQR+LE+C +AQ  P+L+EI +    L++DQXXXXXXXXXXXXXXXXXXXXXXX                                 ++ H+   +  G+  L QVM+ D YANYVVQK+IDVADAE+RE ++  I+  A+ LKR+ FGKHI++RLEK++G+K+
Sbjct:  462 GHIVEFAKDQHGSRFIQQKLETAKADIKDIVFSEIYPVALSLMTDVFGNYVIQKFFDYGNPEHLLLLLRTITGRVLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILPWKASASGSHQRSIERGNFILSAFVGNVYSLATHPYGCRVIQRVLENCSEAQMAPILKEIHDCCCLLVEDQXXXXXXXXXXXXXXXXXXXXXXXKVYPDIVRFSYHKFASNVIEKCLMYASVNQLHVIVQHVMEPNEHGECPL-QVMMKDQYANYVVQKLIDVADAEEREQMVVIIKTQASHLKRFNFGKHILNRLEKLTGQKI 795

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BLAST of jgi.p|Trimin1|167656 vs. uniprot
Match: A0A6G0XDT3_9STRA (PUM-HD domain-containing protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDT3_9STRA)

HSP 1 Score: 173 bits (439), Expect = 4.280e-45
Identity = 126/333 (37.84%), Postives = 162/333 (48.65%), Query Frame = 0

Query:    1 GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHSHIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEKISGKKM 333
            GH V+F +DQHGSRFIQQKLE A    K   F EV P A +LMTDVFGNYV+QK FDHG PD    L                                                             EV+     +   Y+     F++ AF G V  ++TH YGCRVIQR+LEHC D Q   +L EI+++ S L++DQ XXXXXXXXXXXX                                           ++ H+    ++G+  L QVM+ D YANYVVQK+IDVADA +R+ ++  I+  A  LKR+TFGKHI++RLEK++G KM
Sbjct:  406 GHIVEFAKDQHGSRFIQQKLETAKTDIKDIVFSEVFPVALALMTDVFGNYVVQKFFDHGNPDHVLQLMHIINGRMIDLALQMYGCRVIQKALESDYHAEKLELICELEGQVLRCVKDQNANHVVQKCIEVLPWKDPSASRYIE-RASFLLAAFEGNVYSMATHPYGCRVIQRVLEHCSDVQMATILVEIQDACSLLVEDQYXXXXXXXXXXXXQPAERSALINKIYPDIVRFSYHKFASNVIEKCLMYASVEQLHVIMRHVMDA-SDGECPL-QVMMKDQYANYVVQKLIDVADASERDKMVAIIKTQATLLKRFTFGKHILNRLEKLTGYKM 735

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BLAST of jgi.p|Trimin1|167656 vs. uniprot
Match: A0A024UJZ7_9STRA (PUM-HD domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJZ7_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.740e-44
Identity = 110/333 (33.03%), Postives = 145/333 (43.54%), Query Frame = 0

Query:    1 GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHSHIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEKISGKKM 333
            GH V+F +DQHGSRFIQ KLE A    K   F EV P A  LMTDVFGNYVIQK FDHG P     L                                                               +            S   F++++F   V+ +STH YGCRVIQR+LE C D Q  P+L EI++S+  L+ DQ                                                        ++HH+ +    G+  L Q+M+ D YANYVVQK+IDVAD+ +R+ +   I++HAA LKRYT GKHI++RLEK++G+K+
Sbjct:  474 GHIVEFSKDQHGSRFIQLKLETAKPDIKDIVFSEVAPVALQLMTDVFGNYVIQKFFDHGNPQHITQLMRVIQGHMLDLALHMYGCRVIQKALESTDDLDLKLDLICELQGHVLHCIKDQNGNHVIQKCIEILPWKVPSVVEDMSRASFLLESFENNVDTMSTHPYGCRVIQRVLEKCSDEQMAPILREIQDSYGLLVNDQYGNYVIQHVLQHGPPSQRTALINRIYPDIIRFSYHKFSSNVIEKCLSYASVKQLRVIMHHILNSSDNGECPL-QIMMKDQYANYVVQKLIDVADSTERDKMAAIIKSHAANLKRYTHGKHILNRLEKLTGQKI 805

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BLAST of jgi.p|Trimin1|167656 vs. uniprot
Match: A0A067D2Q5_SAPPC (PUM-HD domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067D2Q5_SAPPC)

HSP 1 Score: 166 bits (420), Expect = 2.250e-42
Identity = 187/336 (55.65%), Postives = 222/336 (66.07%), Query Frame = 0

Query:    1 GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVV---CATAKAEGAYLHSHIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEKISGKKM 333
            GH V+F +DQHGSRFIQQKLE A    K   F E+ P A +LMTDVFGNYVIQK FD G       L          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++      A   G        FI+ AF+G V  L+TH YGCRVIQR+LEHC +AQ  P+L+EI +    L++DQXXXXXXXXXXXXXXXXXXXXXXXX                                ++ H+   +  G+  L QVM+ D YANYVVQK+IDVADAE+RE ++  I+  A+ LKR+ FGKHI++RLEK++G+K+
Sbjct:  444 GHMVEFAKDQHGSRFIQQKLETAKADIKDIVFAEIYPVALTLMTDVFGNYVIQKFFDFGTSHHLSLLLRTISGRVLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILPWKTPVAMDVGG-------FILSAFLGNVYSLATHPYGCRVIQRVLEHCTEAQMAPILKEIHDCCCLLVEDQXXXXXXXXXXXXXXXXXXXXXXXXVYPDIVRFSYHKFASNVIEKCLMYASVHQLHVIVAHVMEANERGECPL-QVMMKDQYANYVVQKLIDVADAEERERMVVIIKTQASHLKRFNFGKHILNRLEKLTGQKI 771

[Close]

BLAST of jgi.p|Trimin1|167656 vs. uniprot
Match: A0A485KZD8_9STRA (Aste57867_13784 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZD8_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.260e-42
Identity = 177/333 (53.15%), Postives = 220/333 (66.07%), Query Frame = 0

Query:    1 GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHSHIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEKISGKKM 333
            GH V+F +DQHGSRFIQ KLE A    K   F E+ P A +LMTDVFGNYVIQK FDHG  +    L               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E++         Y+     F++ +F+G V  ++TH YGCRVIQR+LE+C DAQ  P+L EI+++ + +++D XXXXXXXXXXXXXXXXXXXXXXXXXX                              ++ H+  G +      LQVM+ D YANYVVQK+IDVADA +R+ + + I+  A+ LKR+TFGKHI++RLEK++G+K+
Sbjct:  441 GHIVEFAKDQHGSRFIQLKLETAKADIKDIVFSEIFPVALALMTDVFGNYVIQKFFDHGNLEHVMQLMRVIQGRMLDLALQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEILPWKDATASRYME-RAAFLLASFVGNVSIMATHPYGCRVIQRVLENCSDAQMTPILHEIQDACALMVEDXXXXXXXXXXXXXXXXXXXXXXXXXXXPDIVRFSYHKYASNVIEKCLLYASVDQLRVIMRHVMDGKSPAVECPLQVMMKDQYANYVVQKLIDVADASERDKMASIIKTQASVLKRFTFGKHILNRLEKLTGQKI 772

[Close]

BLAST of jgi.p|Trimin1|167656 vs. uniprot
Match: A0A7M5WKX3_9CNID (PUM-HD domain-containing protein n=2 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5WKX3_9CNID)

HSP 1 Score: 164 bits (416), Expect = 2.590e-42
Identity = 185/326 (56.75%), Postives = 214/326 (65.64%), Query Frame = 0

Query:    2 HTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHSHIQFIIDAFMGQVE-KLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLE 326
            H V+F +DQHGSRFIQQKLE AS  EK+  F E++  A SLMTDVFGNYVIQK F+ G PDQ+  LA                                          XXXXXXXXXXXXXXXXXX   C  +        + +QFIIDAF GQV   LSTH YGCRVIQRILEHC   Q  P+L E+      LIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LI  + + + +G    L  M+ D YANYVVQK+IDVA+  QR+ ++ +IR H A L++YT+GKHI+++LE
Sbjct:  289 HIVEFSQDQHGSRFIQQKLERASVLEKSMVFNEILTAAYSLMTDVFGNYVIQKFFEFGSPDQKMLLAQRIKGHVLPLALQMYGCRVIQKALETIPCDMPIHGELVRELDXXXXXXXXXXXXXXXXXXXXXCVDS--------NQLQFIIDAFKGQVVYALSTHPYGCRVIQRILEHCTIDQTSPILAELHEHTERLIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIEEVCN-YVDGPHGALYSMMKDQYANYVVQKMIDVAEPLQRKVLMMKIRPHVATLRKYTYGKHILAKLE 605

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BLAST of jgi.p|Trimin1|167656 vs. uniprot
Match: A0A3Q0RXY2_AMPCI (Pumilio RNA-binding family member 2 n=1 Tax=Amphilophus citrinellus TaxID=61819 RepID=A0A3Q0RXY2_AMPCI)

HSP 1 Score: 164 bits (414), Expect = 2.420e-41
Identity = 185/327 (56.57%), Postives = 215/327 (65.75%), Query Frame = 0

Query:    1 GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHSHIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEK 327
            GH V+F +DQHGSRFIQQKLE A+ AE+   F E++  A  LMTDVFGNYVIQK F+ G  DQ+  LA+             XXXXXXXXXXXXXXXXX                              + C   +A        +QFIIDAF GQV  LSTH YGCRVIQRILEHC   Q  P+LEE+      L QDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR  LI  +     +G  S L  M+ D YANYVVQ++ID+A+  QR+ I+ +IR H A L++YT+GKHI+++LEK
Sbjct:  619 GHMVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSADQKLALATRIRGHVLPLALQMXXXXXXXXXXXXXXXXXQVIVRHLINLDGHVLKCKC-----------IECVQPQA--------LQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHSEQLGQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALLIDEVCC-QKDGPHSALYTMMKDQYANYVVQRMIDMAEPAQRKIIMHKIRPHIATLRKYTYGKHILAKLEK 925

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|167656 vs. uniprot

BLAST of jgi.p|Trimin1|167656 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YYE4_9STRA	7.520e-136	100.00	Armadillo-type protein (Fragment) n=1 Tax=Tribonem...	[more]
D7FWZ0_ECTSI	5.150e-77	79.58	PUM-HD domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A6H5KS31_9PHAE	6.420e-63	75.68	PUM-HD domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A1V9YTD6_9STRA	1.040e-46	56.42	PUM-HD domain-containing protein n=1 Tax=Thraustot...	[more]
A0A6G0XDT3_9STRA	4.280e-45	37.84	PUM-HD domain-containing protein n=2 Tax=Aphanomyc...	[more]
A0A024UJZ7_9STRA	1.740e-44	33.03	PUM-HD domain-containing protein n=2 Tax=Aphanomyc...	[more]
A0A067D2Q5_SAPPC	2.250e-42	55.65	PUM-HD domain-containing protein n=3 Tax=Saprolegn...	[more]
A0A485KZD8_9STRA	2.260e-42	53.15	Aste57867_13784 protein n=1 Tax=Aphanomyces stella...	[more]
A0A7M5WKX3_9CNID	2.590e-42	56.75	PUM-HD domain-containing protein n=2 Tax=Clytia he...	[more]
A0A3Q0RXY2_AMPCI	2.420e-41	56.57	Pumilio RNA-binding family member 2 n=1 Tax=Amphil...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001313	Pumilio RNA-binding repeat	SMART	SM00025	pum_5	coord: 224..259 e-value: 9.5E-6 score: 35.1 coord: 188..223 e-value: 8.1E-7 score: 38.7 coord: 1..33 e-value: 0.044 score: 22.9 coord: 70..105 e-value: 8.2E-6 score: 35.3 coord: 268..303 e-value: 9.4E-6 score: 35.1 coord: 34..69 e-value: 1.3E-7 score: 41.3 coord: 152..187 e-value: 2.2E-6 score: 37.2 coord: 106..141 e-value: 0.065 score: 22.4
IPR001313	Pumilio RNA-binding repeat	PFAM	PF00806	PUF	coord: 39..67 e-value: 1.1E-7 score: 31.3 coord: 195..225 e-value: 1.4E-8 score: 34.2 coord: 116..130 e-value: 4.4E-4 score: 19.9 coord: 74..106 e-value: 5.0E-9 score: 35.7 coord: 278..305 e-value: 2.3E-7 score: 30.4 coord: 228..261 e-value: 1.2E-6 score: 28.1 coord: 157..189 e-value: 4.6E-13 score: 48.6 coord: 2..35 e-value: 8.7E-9 score: 34.9
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 152..187 score: 10.787067
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 267..303 score: 8.990549
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 1..33 score: 9.620497
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 106..143 score: 8.033962
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 224..259 score: 8.873892
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 70..105 score: 9.480509
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 188..223 score: 11.137037
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 34..69 score: 10.553753
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..332 e-value: 3.0E-126 score: 423.0
None	No IPR available	PANTHER	PTHR12537	RNA BINDING PROTEIN PUMILIO-RELATED	coord: 1..329
None	No IPR available	PANTHER	PTHR12537:SF12	MATERNAL PROTEIN PUMILIO	coord: 1..329
IPR033133	Pumilio homology domain	PROSITE	PS50303	PUM_HD	coord: 1..329 score: 112.212242
IPR033712	Pumilio, RNA binding domain	CDD	cd07920	Pumilio	coord: 1..325 e-value: 7.71685E-140 score: 396.962
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 1..326

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_52	contig	Contig_52:553909..560084 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|167656	mRNA_9961	Tribonema minus UTEX_B_3156	mRNA	Contig_52 553909..560084 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|167656|e_gw1.52.93.1 ID=Trimin1|167656|e_gw1.52.93.1|Name=jgi.p|Trimin1|167656|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=334bp
GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNY
VIQKLFDHGGPDQRENLASFLVGHAVQLSLQMYGCRVVQKALEFASIDTL
IALVSEFSGQVMKCVQDQNGNHVIQKCIEVVCATAKAEGAYLHSHIQFII
DAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQ
YGNYVIQHVLKHGRPSDRVMLMNEVRVHLLPYSQHKFASNVVEKCLQYGT
REERGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREG
IITEIRAHAAQLKRYTFGKHIISRLEKISGKKM*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001313	Pumilio_RNA-bd_rpt
IPR011989	ARM-like
IPR033133	PUM-HD
IPR033712	Pumilio_RNA-bd
IPR016024	ARM-type_fold