Trimin1|167343|e_gw1.50.150.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|167343
Unique NameTrimin1|167343|e_gw1.50.150.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length201
Homology
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BLAST of jgi.p|Trimin1|167343 vs. uniprot
Match: A0A835YZU3_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZU3_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 2.580e-6
Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = 0 
Query:    1 NALCGALPATVGALRQLRLLDLQDNQL 27
            NALCGALPATVGALRQLRLLDLQDNQL
Sbjct:    1 NALCGALPATVGALRQLRLLDLQDNQL 27
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|167343 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YZU3_9STRA2.580e-6100.00Leucine rich repeat protein n=1 Tax=Tribonema minu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 17..30
score: 46.84
coord: 62..75
score: 49.5
NoneNo IPR availablePANTHERPTHR48054RECEPTOR KINASE-LIKE PROTEIN XA21coord: 35..128
NoneNo IPR availablePANTHERPTHR48054:SF26LEUCINE-RICH REPEAT PROTEIN 1coord: 74..176
NoneNo IPR availablePANTHERPTHR48054RECEPTOR KINASE-LIKE PROTEIN XA21coord: 74..176
NoneNo IPR availablePANTHERPTHR48054RECEPTOR KINASE-LIKE PROTEIN XA21coord: 1..80
NoneNo IPR availablePANTHERPTHR48054:SF26LEUCINE-RICH REPEAT PROTEIN 1coord: 35..128
coord: 1..80
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 3..178
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 86..110
e-value: 7.7
score: 14.2
coord: 14..38
e-value: 19.0
score: 11.1
coord: 62..85
e-value: 93.0
score: 5.3
coord: 158..181
e-value: 150.0
score: 3.7
coord: 134..157
e-value: 400.0
score: 0.2
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 64..85
e-value: 1.1
score: 10.1
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 88..146
e-value: 1.0E-6
score: 28.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..185
e-value: 3.2E-57
score: 196.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_50contigContig_50:243058..243660 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167343mRNA_8893Tribonema minus UTEX_B_3156 mRNAContig_50 243058..243660 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|167343|e_gw1.50.150.1 ID=Trimin1|167343|e_gw1.50.150.1|Name=jgi.p|Trimin1|167343|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=201bp
NALCGALPATVGALRQLRLLDLQDNQLSGPLPDALGQLQLLQWLNLAGNM
LTGPIPPSIGRMSSLVSLDLSRNRLEGPLPPEIGALPLLQSLYLGSNRLS
GALPPALGRARSLIFLVLSNNAFSGCVPAELGALDCLQDLRLDHNAFDGA
VPEELAGLKALKTLRVEDNQLSGAVPRELRKALGMGPEPVVPTGCRCVIA
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf