Trimin1|167241|e_gw1.49.95.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|167241
Unique NameTrimin1|167241|e_gw1.49.95.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length125
Homology
BLAST of jgi.p|Trimin1|167241 vs. uniprot
Match: A0A835YRV7_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRV7_9STRA)

HSP 1 Score: 226 bits (577), Expect = 8.610e-75
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
Query:    1 MSYGGGFGQXXXXXXXEPYNSNSARARETARNMLEMENDRHISNLSEQVSMLKGLTIDIGNEVNSQNTLLDGMSNSMFDANGLLGGTMKKIGTMMKRGGSKHMCYLVAFIVLTFLVIWWLMGKK 124
            MSYGGGFGQXXXXXXXEPYNSNSARARETARNMLEMENDRHISNLSEQVSMLKGLTIDIGNEVNSQNTLLDGMSNSMFDANGLLGGTMKKIGTMMKRGGSKHMCYLVAFIVLTFLVIWWLMGKK
Sbjct:    1 MSYGGGFGQXXXXXXXEPYNSNSARARETARNMLEMENDRHISNLSEQVSMLKGLTIDIGNEVNSQNTLLDGMSNSMFDANGLLGGTMKKIGTMMKRGGSKHMCYLVAFIVLTFLVIWWLMGKK 124          
BLAST of jgi.p|Trimin1|167241 vs. uniprot
Match: D7FPR8_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPR8_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 2.790e-35
Identity = 62/105 (59.05%), Postives = 83/105 (79.05%), Query Frame = 0
Query:   19 YNSNSARARETARNMLEMENDRHISNLSEQVSMLKGLTIDIGNEVNSQNTLLDGMSNSMFDANGLLGGTMKKIGTMMKRGGSKHMCYLVAFIVLTFLVIWWLMGK 123
            Y++ + R +ET  N++EM+N+ HI +LS+QVS LK LTIDIG EV SQN L+ GM   MFDA GLLGGT+++I TMM +GGS+HMCYLVAFIV TF+ IW+++ +
Sbjct:   20 YSAPTDRIKETNHNIMEMQNNAHIDDLSDQVSRLKHLTIDIGQEVRSQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFMAIWYILKQ 124          
BLAST of jgi.p|Trimin1|167241 vs. uniprot
Match: A0A7S2G7S7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7S7_9STRA)

HSP 1 Score: 106 bits (264), Expect = 3.990e-27
Identity = 63/121 (52.07%), Postives = 83/121 (68.60%), Query Frame = 0
Query:    4 GGGFGQXXXXXXXEPYNSNSARARETARNMLEMENDRHISNLSEQVSMLKGLTIDIGNEVNSQNTLLDGMSNSMFDANGLLGGTMKKIGTMMKRGGSKHMCYLVAFIVLTFLVIWWLMGKK 124
            GGG   XXXXXX   + S S R  ET R +LE +ND  I+ L++Q+  LK L+IDI  EV  QN +LDGM N M  A+GLL  T+ K+GTM+K GGSKHM YL+ F+V +F++I+W+M  K
Sbjct:    2 GGGXXXXXXXXXGNRWGSASDRVAETNRRLLEQQNDSSINTLADQLGRLKELSIDINEEVADQNRMLDGMGNQMNSASGLLNETLGKLGTMLKSGGSKHMVYLIGFVVFSFIMIYWIMTHK 122          
BLAST of jgi.p|Trimin1|167241 vs. uniprot
Match: A0A7S0CDW0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CDW0_9STRA)

HSP 1 Score: 106 bits (264), Expect = 6.620e-27
Identity = 53/108 (49.07%), Postives = 74/108 (68.52%), Query Frame = 0
Query:   17 EPYNSNSARARETARNMLEMENDRHISNLSEQVSMLKGLTIDIGNEVNSQNTLLDGMSNSMFDANGLLGGTMKKIGTMMKRGGSKHMCYLVAFIVLTFLVIWWLMGKK 124
            +P       A ET +N+LE +N+  IS LS+QV+ LKGLTIDIGNEV  QN+LLD M +       LL G++++IG M+++GGSKHMCY+V+FIV     ++W+M  K
Sbjct:   32 DPERGGRMSATETNQNILEQQNNDRISELSDQVARLKGLTIDIGNEVREQNSLLDDMGDGFNSTRDLLAGSLRRIGNMLEQGGSKHMCYMVSFIVFVMFFLYWVMSYK 139          
BLAST of jgi.p|Trimin1|167241 vs. uniprot
Match: A0A7S2NWZ0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NWZ0_9STRA)

HSP 1 Score: 104 bits (259), Expect = 2.780e-26
Identity = 51/97 (52.58%), Postives = 72/97 (74.23%), Query Frame = 0
Query:   28 ETARNMLEMENDRHISNLSEQVSMLKGLTIDIGNEVNSQNTLLDGMSNSMFDANGLLGGTMKKIGTMMKRGGSKHMCYLVAFIVLTFLVIWWLMGKK 124
            ET  N++E +N+  I++LSEQV+ LKGLTIDIGNEV  QN+LLD M ++  +   LL GTM++IGT++ RGG+KHM YLV F+V   + ++W+M  K
Sbjct:   36 ETNSNIMEQQNNERIADLSEQVARLKGLTIDIGNEVREQNSLLDNMGDNFGNVGDLLNGTMRRIGTLLDRGGAKHMFYLVGFVVAVMVFLYWVMKHK 132          
BLAST of jgi.p|Trimin1|167241 vs. uniprot
Match: B7G253_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G253_PHATC)

HSP 1 Score: 103 bits (258), Expect = 5.500e-26
Identity = 49/93 (52.69%), Postives = 67/93 (72.04%), Query Frame = 0
Query:   32 NMLEMENDRHISNLSEQVSMLKGLTIDIGNEVNSQNTLLDGMSNSMFDANGLLGGTMKKIGTMMKRGGSKHMCYLVAFIVLTFLVIWWLMGKK 124
            N+LE +N+  I+ LS+ V+ LKGLTIDIGNEV  QN+LLD M +   +   +L G++++IGTM++ GG KHMCY+VAF V   L +WWLM  K
Sbjct:   48 NILESQNNDRINELSDHVARLKGLTIDIGNEVREQNSLLDNMGDGFENTRDMLAGSLRRIGTMLESGGMKHMCYMVAFCVFVMLFLWWLMSHK 140          
BLAST of jgi.p|Trimin1|167241 vs. uniprot
Match: A0A4D9D9V6_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9V6_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.650e-25
Identity = 55/123 (44.72%), Postives = 79/123 (64.23%), Query Frame = 0
Query:    2 SYGGGFGQXXXXXXXEPYNSNSARARETARNMLEMENDRHISNLSEQVSMLKGLTIDIGNEVNSQNTLLDGMSNSMFDANGLLGGTMKKIGTMMKRGGSKHMCYLVAFIVLTFLVIWWLMGKK 124
            +YGGG  Q         Y++   R RE++RNM E EN+R I +L+ QVSMLK LTIDIG EV SQN LLD M +     +GL+G TM+++  M+    S+HM +LVAF+V  F+ +++++  K
Sbjct:   24 AYGGGMPQAGPGRQSNYYSTPEDRVRESSRNMFEEENNRRIGDLAGQVSMLKELTIDIGTEVRSQNHLLDDMGSGFLRTDGLMGSTMRRLNKMLTTSSSRHMLWLVAFVVFVFIFVYYIIRHK 146          
BLAST of jgi.p|Trimin1|167241 vs. uniprot
Match: A0A7S1ZI29_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZI29_TRICV)

HSP 1 Score: 102 bits (255), Expect = 1.650e-25
Identity = 49/99 (49.49%), Postives = 71/99 (71.72%), Query Frame = 0
Query:   26 ARETARNMLEMENDRHISNLSEQVSMLKGLTIDIGNEVNSQNTLLDGMSNSMFDANGLLGGTMKKIGTMMKRGGSKHMCYLVAFIVLTFLVIWWLMGKK 124
            A E   N++E +N+  I+ LSE V+ LKGLTIDIGNEV  QN+LLD M +S  +   +L G++K+IGTM+++GG+KHMCY++ F+V     ++WLM  K
Sbjct:   44 ATEMNANIMEQQNNDRINELSESVARLKGLTIDIGNEVKEQNSLLDNMGDSFGNVGDMLAGSLKRIGTMLEKGGAKHMCYMIGFVVFVMCFLYWLMTYK 142          
BLAST of jgi.p|Trimin1|167241 vs. uniprot
Match: A0A7S2UA83_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UA83_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.760e-25
Identity = 50/99 (50.51%), Postives = 71/99 (71.72%), Query Frame = 0
Query:   26 ARETARNMLEMENDRHISNLSEQVSMLKGLTIDIGNEVNSQNTLLDGMSNSMFDANGLLGGTMKKIGTMMKRGGSKHMCYLVAFIVLTFLVIWWLMGKK 124
            A ET  N++E +N+  I  LSEQV+ LKGLTIDIGNEV  QN+LLD M +   +   LL G++++IGTM++ GG+KHMCY+V F+V   + ++W+M  K
Sbjct:   86 ASETNANIMEQQNNDRIDELSEQVARLKGLTIDIGNEVKEQNSLLDDMGDGFANTRDLLAGSLRRIGTMLESGGAKHMCYMVGFVVFVMVFLYWVMTHK 184          
BLAST of jgi.p|Trimin1|167241 vs. uniprot
Match: A0A1Z5KR69_FISSO (Blocked early in transport 1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KR69_FISSO)

HSP 1 Score: 102 bits (253), Expect = 2.650e-25
Identity = 55/119 (46.22%), Postives = 76/119 (63.87%), Query Frame = 0
Query:    3 YGGGFGQXXXXXXXEPYNSNSARARETARNMLEMENDRHISNLSEQVSMLKGLTIDIGNEVNSQNTLLDGMSNSMFDANGLLGGTMKKIGTMMKRGGSKHMCYLVAFIVLTFLVIWWLM 121
            Y GG+G           N N   +R+T   +LE +N+  I+ LSE V+ LKGLTIDIG+EV  QN+LLDGM++   +   LL  ++ +IGTM++ GG+KHMCYLV F V   + +WWLM
Sbjct:   19 YKGGYGDIEGGRRG---NRNGFSSRDTNTGILEQQNNERINELSEHVARLKGLTIDIGDEVRQQNSLLDGMNDGFQNTRDLLQSSLMRIGTMLESGGAKHMCYLVGFSVFVMVFLWWLM 134          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|167241 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YRV7_9STRA8.610e-75100.00Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
D7FPR8_ECTSI2.790e-3559.05Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A7S2G7S7_9STRA3.990e-2752.07Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0CDW0_9STRA6.620e-2749.07Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2NWZ0_9STRA2.780e-2652.58Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B7G253_PHATC5.500e-2652.69Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A4D9D9V6_9STRA1.650e-2544.72t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S1ZI29_TRICV1.650e-2549.49Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2UA83_9STRA1.760e-2550.51Hypothetical protein n=2 Tax=Attheya septentrional... [more]
A0A1Z5KR69_FISSO2.650e-2546.22Blocked early in transport 1 n=1 Tax=Fistulifera s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 27..94
e-value: 1.6E-4
score: 31.0
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 32..94
score: 14.534546
NoneNo IPR availableGENE3D1.20.5.110coord: 39..101
e-value: 6.4E-13
score: 50.5
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 31..94
IPR039897BET1-like proteinPANTHERPTHR12791GOLGI SNARE BET1-RELATEDcoord: 25..121
IPR039899BET1, SNARE domainCDDcd15853SNARE_Bet1coord: 35..93
e-value: 2.96351E-22
score: 81.0098

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_49contigContig_49:878883..880859 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167241mRNA_10504Tribonema minus UTEX_B_3156 mRNAContig_49 878883..880859 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|167241|e_gw1.49.95.1 ID=Trimin1|167241|e_gw1.49.95.1|Name=jgi.p|Trimin1|167241|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=125bp
MSYGGGFGQGGGYGGGEPYNSNSARARETARNMLEMENDRHISNLSEQVS
MLKGLTIDIGNEVNSQNTLLDGMSNSMFDANGLLGGTMKKIGTMMKRGGS
KHMCYLVAFIVLTFLVIWWLMGKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR039897BET1
IPR039899BET1_SNARE