Trimin1|167011|e_gw1.47.94.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|167011
Unique NameTrimin1|167011|e_gw1.47.94.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length526
Homology
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BLAST of jgi.p|Trimin1|167011 vs. uniprot
Match: A0A835YRQ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRQ2_9STRA)

HSP 1 Score: 167 bits (423), Expect = 5.310e-42
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0 
Query:    1 MLKLYACERLQRLREGVGDLVTLSALNLGGXXXXXXXXXXXXXXXXXXXXXXASLDARRLLPSFRCFAVLTSLDLRGTDFTRFPAACIRDLTALRTXXXXXXXXXXXXXGVCALAELXRLSLYXCTGL 128
            MLKLYACERLQRLREGVGDLVTLSALNLGGXXXXXXXXXXXXXXXXXXXXXXASLDARRLLPSFRCFAVLTSLDLRGTDFTRFPAACIRDLTALRTXXXXXXXXXXXXXGVCALAELXRLSLYXCTGL
Sbjct:    1 MLKLYACERLQRLREGVGDLVTLSALNLGGXXXXXXXXXXXXXXXXXXXXXXASLDARRLLPSFRCFAVLTSLDLRGTDFTRFPAACIRDLTALRTXXXXXXXXXXXXXGVCALAELXRLSLYXCTGL 128
[Close]
BLAST of jgi.p|Trimin1|167011 vs. uniprot
Match: A0A836CQ25_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQ25_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.500e-8
Identity = 37/71 (52.11%), Postives = 43/71 (60.56%), Query Frame = 0 
Query:   53 ASLDARRLLPSFRCFAVLTSLDLRGTDFTRFPAACIRDLTALRTXXXXXXXXXXXXXGVCALAELXRLSLY 123
            AS++AR LL SFRCFA LT+L L G+D  RF A CI  LTALR+             GVC LA L  LSL+
Sbjct:  176 ASMNARGLLSSFRCFATLTALCLHGSDSARFSAECIGALTALRSLNLGCSQLTKLPEGVCTLASLTDLSLW 246
[Close]
BLAST of jgi.p|Trimin1|167011 vs. uniprot
Match: A0A835YXX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXX7_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 5.320e-6
Identity = 31/68 (45.59%), Postives = 38/68 (55.88%), Query Frame = 0 
Query:   55 LDARRLLPSFRCFAVLTSLDLRGTDFTRFPAACIRDLTALRTXXXXXXXXXXXXXGVCALAELXRLSL 122
            L A RLLPSFRC A+LTSLD++  D  +FP  C+R++ ALRT              VC L  L  L L
Sbjct:  342 LSADRLLPSFRCLAMLTSLDVQRIDTGKFPEKCVREMAALRTLDLRHWQAAALPEAVCDLRRLTHLDL 409
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|167011 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835YRQ2_9STRA5.310e-42100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CQ25_9STRA3.500e-852.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YXX7_9STRA5.320e-645.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 385..409
e-value: 120.0
score: 4.6
coord: 186..210
e-value: 100.0
score: 5.1
coord: 138..162
e-value: 190.0
score: 2.8
coord: 416..440
e-value: 110.0
score: 4.7
coord: 265..289
e-value: 120.0
score: 4.5
coord: 91..114
e-value: 0.12
score: 21.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 407..514
e-value: 2.1E-24
score: 87.6
coord: 234..406
e-value: 2.1E-43
score: 150.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..233
e-value: 4.9E-47
score: 162.0
NoneNo IPR availablePANTHERPTHR16083:SF25SUBFAMILY NOT NAMEDcoord: 330..404
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 2..108
coord: 233..328
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 330..404
NoneNo IPR availablePANTHERPTHR16083:SF25SUBFAMILY NOT NAMEDcoord: 405..506
NoneNo IPR availablePANTHERPTHR16083:SF25SUBFAMILY NOT NAMEDcoord: 107..229
NoneNo IPR availablePANTHERPTHR16083:SF25SUBFAMILY NOT NAMEDcoord: 2..108
coord: 233..328
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 405..506
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 107..229
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 131..499
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_47contigContig_47:862951..866693 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167011mRNA_6299Tribonema minus UTEX_B_3156 mRNAContig_47 862951..866693 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|167011|e_gw1.47.94.1 ID=Trimin1|167011|e_gw1.47.94.1|Name=jgi.p|Trimin1|167011|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=526bp
MLKLYACERLQRLREGVGDLVTLSALNLGGCSALQSLPVSVQALTQLKSL
GLASLDARRLLPSFRCFAVLTSLDLRGTDFTRFPAACIRDLTALRTLDLG
ASQLMTLPPGVCALAELTRLSLYGCTGLVHLPDAIGELRALTALNLADCR
ALARLPDGIGGLRALTQLLLADCYALTALPESIGELAALTSLNLQDCRAL
TRLPESIGGLTALTDLTLRSCQALMQLPERFGDLPDSIGEVTTLTALTLR
DCRRLAGLPESIGGLTQLTALSLRHCHKLRRLPESVGGLTALATLDLAFC
TALVGVPESFGGVSALTALNLTDCRALPRLPNRLGSLAALATLDLSLCSV
LQRLLDSIGGLATLTALTLRGCDRLRRLPDSIGDLAALTELDLDDCSALQ
SLPDGLTCLPDAIGELRALTALDLTKCRALTRLPDGICRLRALTRLTLRR
CSALEELLESIGGLAALTDLNLRSCRALMWLPERIGELAALQRIDLFDCS
GLQCVPDTLVCVPGSWDVYAVASTD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf