Trimin1|166751|e_gw1.46.171.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|166751
Unique NameTrimin1|166751|e_gw1.46.171.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length74
Homology
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BLAST of jgi.p|Trimin1|166751 vs. uniprot
Match: A0A836CCP2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCP2_9STRA)

HSP 1 Score: 124 bits (312), Expect = 5.950e-36
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 
Query:    1 MRLRLCDQWWSPRHMLTHTEIKAFACGFDLCEYRSTEKSTMVNHERXXXXXXXXXXXXXXXXKTFTATSTRDRH 74
            MRLRLCDQWWSPRHMLTHTEIKAFACGFDLCEYRSTEKSTMVNHERXXXXXXXXXXXXXXXXKTFTATSTRDRH
Sbjct:    1 MRLRLCDQWWSPRHMLTHTEIKAFACGFDLCEYRSTEKSTMVNHERXXXXXXXXXXXXXXXXKTFTATSTRDRH 74
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|166751 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CCP2_9STRA5.950e-36100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 46..74
e-value: 1.3E-6
score: 30.3
coord: 12..45
e-value: 8.9E-7
score: 30.8
NoneNo IPR availablePANTHERPTHR19818:SF129PAIR-RULE PROTEIN ODD-PAIREDcoord: 14..74
NoneNo IPR availablePANTHERPTHR19818ZINC FINGER PROTEIN ZIC AND GLIcoord: 14..74
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 24..53
score: 10.948853
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 54..74
score: 8.517231
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 12..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_46contigContig_46:75230..75451 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|166751mRNA_4556Tribonema minus UTEX_B_3156 mRNAContig_46 75230..75451 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|166751|e_gw1.46.171.1 ID=Trimin1|166751|e_gw1.46.171.1|Name=jgi.p|Trimin1|166751|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=74bp
MRLRLCDQWWSPRHMLTHTEIKAFACGFDLCEYRSTEKSTMVNHERTHTA
ARPYSCLVNDCDKTFTATSTRDRH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf