Trimin1|166475|e_gw1.44.128.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|166475
Unique NameTrimin1|166475|e_gw1.44.128.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length980
Homology
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BLAST of jgi.p|Trimin1|166475 vs. uniprot
Match: A0A835YSV0_9STRA (Tfp pilus assembly protein PilF (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSV0_9STRA)

HSP 1 Score: 113 bits (282), Expect = 9.990e-22
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 
Query:    1 MRNSLVDVLDKQGGLEEAEQRLRALVNEETALRPDHPSTVVTLYDLAXXXXXXXXXXXXXXLYRRALDIRASAFG 75
            MRNSLVDVLDKQGGLEEAEQRLRALVNEETALRPDHPSTVVTLYDLAXXXXXXXXXXXXXXLYRRALDIRASAFG
Sbjct:    1 MRNSLVDVLDKQGGLEEAEQRLRALVNEETALRPDHPSTVVTLYDLAXXXXXXXXXXXXXXLYRRALDIRASAFG 75
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|166475 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YSV0_9STRA9.990e-22100.00Tfp pilus assembly protein PilF (Fragment) n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 8..28
NoneNo IPR availablePFAMPF13424TPR_12coord: 896..953
e-value: 4.8E-12
score: 46.0
coord: 627..701
e-value: 8.5E-15
score: 54.8
coord: 711..785
e-value: 9.4E-13
score: 48.3
coord: 333..407
e-value: 1.3E-14
score: 54.3
coord: 501..575
e-value: 1.8E-13
score: 50.5
coord: 43..110
e-value: 1.4E-17
score: 63.7
coord: 795..869
e-value: 1.3E-15
score: 57.4
coord: 417..489
e-value: 9.4E-14
score: 51.5
coord: 206..279
e-value: 7.7E-16
score: 58.2
coord: 123..192
e-value: 7.3E-15
score: 55.0
NoneNo IPR availablePFAMPF13374TPR_10coord: 585..624
e-value: 2.2E-6
score: 27.3
coord: 291..330
e-value: 1.1E-8
score: 34.7
NoneNo IPR availablePANTHERPTHR45783KINESIN LIGHT CHAINcoord: 82..236
coord: 351..485
coord: 1..151
coord: 561..682
coord: 728..865
coord: 113..277
coord: 267..378
coord: 435..571
coord: 645..761
coord: 855..976
coord: 470..613
coord: 519..653
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 838..871
e-value: 290.0
score: 2.1
coord: 208..241
e-value: 0.0047
score: 26.1
coord: 670..703
e-value: 160.0
score: 4.4
coord: 754..787
e-value: 170.0
score: 4.1
coord: 40..73
e-value: 0.0089
score: 25.2
coord: 460..493
e-value: 83.0
score: 6.9
coord: 796..829
e-value: 54.0
score: 8.5
coord: 586..619
e-value: 58.0
score: 8.2
coord: 82..115
e-value: 0.61
score: 19.1
coord: 376..409
e-value: 170.0
score: 4.1
coord: 502..535
e-value: 130.0
score: 5.3
coord: 922..955
e-value: 170.0
score: 4.1
coord: 250..283
e-value: 19.0
score: 12.5
coord: 334..367
e-value: 20.0
score: 12.2
coord: 124..157
e-value: 0.75
score: 18.8
coord: 880..913
e-value: 110.0
score: 5.6
coord: 166..199
e-value: 0.78
score: 18.8
coord: 418..451
e-value: 290.0
score: 2.2
coord: 712..745
e-value: 200.0
score: 3.4
coord: 292..325
e-value: 45.0
score: 9.2
coord: 544..577
e-value: 170.0
score: 4.1
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 82..115
score: 8.0244
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 208..241
score: 8.6734
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 40..73
score: 8.5554
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 112..278
e-value: 6.1E-50
score: 171.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 473..610
e-value: 2.8E-40
score: 140.2
coord: 830..979
e-value: 5.1E-45
score: 155.7
coord: 1..111
e-value: 4.7E-28
score: 100.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 301..472
e-value: 8.0E-52
score: 177.6
coord: 629..820
e-value: 4.3E-54
score: 185.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 710..825
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 37..279
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 207..656
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 833..977

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_44contigContig_44:840828..843767 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|166475mRNA_9126Tribonema minus UTEX_B_3156 mRNAContig_44 840828..843767 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|166475|e_gw1.44.128.1 ID=Trimin1|166475|e_gw1.44.128.1|Name=jgi.p|Trimin1|166475|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=980bp
MRNSLVDVLDKQGGLEEAEQRLRALVNEETALRPDHPSTVVTLYDLADVL
HKQGNFGEAEQLYRRALDIRASAFGPHRLSTATIYHSLAEALQQQGKLAE
AEMLFKQAVAFEERANGTEHSEMASMLNSLASILEQQGNLTESEQLFRRV
LDIEVDVFGPDSPAVTASLYNIACILESQGNSEEAESMFRRASVITEDVA
GAEHAQTAEALYLLASMLQKHDKFEEAEVLFRRALTMFEKTLGAEHSNTA
VTLHALARVVSKRGKTEEAEALFRHALAIEEVALGPENASTATTMHELAC
MLFQRGGSEAAEALFRRALAIEEVALGPEHASTATTLYELARVVSQRGGT
EEAEALFRRALAIEEVALGPEHASTAVTIHELACLVSERGGTEEAEALFR
RALAIKEVALGPEHASTATTIHELARVISERGGTEEAEALFRRALAIEEV
ALGPEHASTAVTIHELACLVYERGGTEEAEALFRRALAIEEVALGPEHAS
TATTIHALARLVSERGGMEEAEALFRRALAIEEAALGPEHASTAVTIHEL
ACLVSERGGTEEAEALFRRALAIKEVALGPEHASTATTIYELARVVSERG
GTEEAEALFRRALAIEEIALGPQHASTATTIHELARVITERGGAEEAEAL
FRRALAIEEIALGPQHALTARTIHALARLVSERGGTEEAEALFRRALAIK
EVALGLEHASTATTVHALARLVSERGGMEEAEALFRRALTIEEAALGPEH
ASTAVTIHELACLVSERGGTEEAEALFRRALAIKEVALGPEHASTATTIY
NLARVVSERGGAEEAEALFRRALAIEEVALGPQHASTATTIHALARVVSE
RGGTEEAEALFRRVLAIKEAALGPEHAQTAVTIHELACLVSERGGTEEAE
ALFRRALAIKEAALGPEHAQTAVTIHELACLVSERGGTEEAEALFRRALA
IKEVALGPEHASTATTIYNLARVVSERGGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf