Trimin1|166442|e_gw1.44.7.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|166442
Unique NameTrimin1|166442|e_gw1.44.7.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length155
Homology
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|166442 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.10.10Hexapeptide repeat proteinscoord: 2..155
e-value: 2.5E-8
score: 35.7
IPR011004Trimeric LpxA-like superfamilySUPERFAMILY51161Trimeric LpxA-like enzymescoord: 10..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_44contigContig_44:956785..957249 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|166442mRNA_9156Tribonema minus UTEX_B_3156 mRNAContig_44 956785..957249 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|166442|e_gw1.44.7.1 ID=Trimin1|166442|e_gw1.44.7.1|Name=jgi.p|Trimin1|166442|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=155bp
MLTAGSANLSSTLTVGAATTLSNTLSVGGATTVGNTLSVAAATTLSNTLA
VAATVSFGDNVVISSTKTLTAGSANLSSTLTVGAATTLSSTLSVGAAVNL
SNTLSVAAATTLSNTLAVAATASFEDNVVVSSTKMLTAGSANLSGTLTVG
AATTI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011004Trimer_LpxA-like_sf