Trimin1|165937|e_gw1.41.87.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|165937
Unique NameTrimin1|165937|e_gw1.41.87.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length266
Homology
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BLAST of jgi.p|Trimin1|165937 vs. uniprot
Match: A0A835YTA6_9STRA (Armadillo-type protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTA6_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.740e-14
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 0 
Query:    1 MRAPGASAEVVLQSLRAVANLSSNTAENQTALGVAGACQAVVEAM 45
            MRAPGASAEVVLQSLRAVANLSSNTAENQTALGVAGACQAVVEAM
Sbjct:    1 MRAPGASAEVVLQSLRAVANLSSNTAENQTALGVAGACQAVVEAM 45
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|165937 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YTA6_9STRA1.740e-14100.00Armadillo-type protein (Fragment) n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 113..155
e-value: 0.2
score: 20.8
coord: 25..67
e-value: 9.4
score: 13.4
coord: 157..199
e-value: 7.1
score: 14.4
coord: 201..243
e-value: 9.4
score: 13.4
coord: 69..111
e-value: 0.049
score: 22.8
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 212..256
score: 10.5174
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 124..168
score: 8.7324
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 168..212
score: 9.4674
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 36..80
score: 11.1824
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 80..124
score: 10.5174
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 95..182
e-value: 2.5E-12
score: 48.7
coord: 183..266
e-value: 3.3E-10
score: 41.8
coord: 4..94
e-value: 4.0E-12
score: 48.0
NoneNo IPR availablePANTHERPTHR22895:SF7PROTEIN AARDVARKcoord: 22..200
coord: 160..266
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 22..200
coord: 160..266
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 8..265

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_41contigContig_41:914744..915541 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|165937mRNA_4516Tribonema minus UTEX_B_3156 mRNAContig_41 914744..915541 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|165937|e_gw1.41.87.1 ID=Trimin1|165937|e_gw1.41.87.1|Name=jgi.p|Trimin1|165937|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=266bp
MRAPGASAEVVLQSLRAVANLSSNTAENQTALGVAGACQAVVEAMRAPGA
SAEVVLQALRAVVNLSANNADNKTALGEAGACQAVVEAMRAPGASAEVVL
QALRAVVNLSANNADNKTALGVAGACQTVVDAMRAPRASAEVVLQALWAV
ANVSSSTAENQTALGVAGACQAVVDAMRAPGASAEVVLQSLRAVANLSSN
TAENQTALGVAGACQAVVEAMRAPGASAEVVLQALRAVVNLSANNADNKT
ALGVAGACQTVVDAMR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold