Trimin1|164861|e_gw1.33.16.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|164861
Unique NameTrimin1|164861|e_gw1.33.16.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length245
Homology
BLAST of jgi.p|Trimin1|164861 vs. uniprot
Match: A0A835YZE2_9STRA (Trimeric LpxA-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZE2_9STRA)

HSP 1 Score: 486 bits (1250), Expect = 1.850e-173
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0
Query:    1 MPHQLCDTLPCSQLQFAKCLLHRSSCLFPEPRNSRTLCSLSLAVARHRPLMILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSSIHVGGLSSVGDKTVINTVAKLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDLAKKGITV 244
            MPHQLCDTLPCSQLQFAKCLLHRSSCLFPEPRNSRTLCSLSLAVARHRPLMILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSSIHVGGLSSVGDKTVINTVAKLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDLAKKGITV
Sbjct:    1 MPHQLCDTLPCSQLQFAKCLLHRSSCLFPEPRNSRTLCSLSLAVARHRPLMILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSSIHVGGLSSVGDKTVINTVAKLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDLAKKGITV 244          
BLAST of jgi.p|Trimin1|164861 vs. uniprot
Match: A0A1E7EZU7_9STRA (Gamma carbonic anhydrase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EZU7_9STRA)

HSP 1 Score: 149 bits (377), Expect = 5.030e-41
Identity = 86/201 (42.79%), Postives = 117/201 (58.21%), Query Frame = 0
Query:   44 VARHRPLMILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSS-IHVGGLSSVGDKTVINTVAK---LSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDLAKK 240
            ++RHRP M   G+AP     + F+AP ASV+G+V   D +++WYGAV+R D S  I +G  SSVG+ +V+ T+ K   LSTGFP    IG+YV I  GC L SC V D   IG    + EG+I+E   +L PG      S +PS Q WGGNPAQ+V ++ +D   N K  +      ++EH+ EF P    + H EDL  K
Sbjct:   30 ISRHRPQMTFLGQAPFVT-NDTFIAPTASVIGEVTNWDQSSVWYGAVVRADSSHPITIGFTSSVGEGSVVTTLKKNATLSTGFPPVTHIGHYVTIGSGCVLKSCRVDDLVVIGEKCTILEGSIVESNVMLEPGTVIPPYSYIPSGQKWGGNPAQFVANLTTDETENIKKISLEIHQKAKEHLLEFLPVGNTYVHLEDLELK 229          
BLAST of jgi.p|Trimin1|164861 vs. uniprot
Match: A0A7S4JY93_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JY93_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.530e-39
Identity = 83/201 (41.29%), Postives = 117/201 (58.21%), Query Frame = 0
Query:   46 RHRPLMILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSS-IHVGGLSSVGDKTVINT----VAKLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDLAKKG 241
            RHRP +I NG  P +   + F+AP ASV+GDV   D +++W+GAV+R D    I +G  S+V D+ V+NT    V  + TGFP    +G+YV +  G  L SC V D  +IG    + EGAI+E + IL  G      + +PS Q WGGNPA+++ +++SD     K +AER  + + EH  EF P    + H EDL KKG
Sbjct:   31 RHRPKVIFNGIKPFET-NDTFIAPTASVIGDVTNWDESSVWFGAVVRADSGHPITIGFSSNVQDRAVLNTLPASVENMETGFPPICHVGHYVSVGAGSVLVSCRVEDIVDIGEKCTIMEGAIVEGEVILEAGTVVPPYARIPSGQRWGGNPAKFISNLNSDEKGGIKAKAERIHITASEHQVEFLPVGSTYLHLEDLEKKG 230          
BLAST of jgi.p|Trimin1|164861 vs. uniprot
Match: A0A6U3QAK0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3QAK0_9STRA)

HSP 1 Score: 144 bits (363), Expect = 6.070e-39
Identity = 80/201 (39.80%), Postives = 117/201 (58.21%), Query Frame = 0
Query:   46 RHRPLMILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSSIHVGGLSSVGDKTVINT----VAKLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDLAKKGI 242
            RHRP M+  G  P K   + F+AP+ASV+G+V   D +++WYGAV+R D   I +G  S++ D+ V+NT    V  L +GFP    +G+YV +  G  L SC V D  +IG    + EGA++E   IL PG      + +PS Q WGGNPAQ++ ++++D  A  + +AE     + EH  EF P    + H E+L KKG+
Sbjct:   32 RHRPNMMFWGVKPFKT-NDTFIAPSASVIGNVTNWDESSVWYGAVVRADAHPITIGFSSNIQDRAVLNTLPSSVKGLQSGFPPVCHVGHYVSVGAGSVLVSCRVEDLVDIGEKCTIMEGALVESNVILEPGTVVPAYARIPSGQRWGGNPAQFIANLNADEKAAIETKAEEIHQQAREHNVEFLPYGNTYVHLEELEKKGV 231          
BLAST of jgi.p|Trimin1|164861 vs. uniprot
Match: A0A087SU61_AUXPR (Gamma carbonic anhydrase-like 1, mitochondrial n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SU61_AUXPR)

HSP 1 Score: 143 bits (361), Expect = 3.200e-38
Identity = 79/192 (41.15%), Postives = 114/192 (59.38%), Query Frame = 0
Query:   46 RHRPLMILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSSIHVGGLSSVGDKTVINTVAKLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDL 237
            R R L+ L  + P     + +VAP+A V+GDVDL D  +IWYGAVLRGD ++I VG  S+V D+TVI+  +   TG PA   IG+YV + +GC L S  + DQ  +G   V+ EG+++E+QS+L PGXXX       + ++W GNPA++V  +  D  A     A       ++H +EF P + A+  AE L
Sbjct:   50 RQRQLIPLGNRVPSLA-PDAWVAPSAVVIGDVDLYDQASIWYGAVLRGDLNTIKVGAFSNVQDRTVIHAASSSPTGLPAATTIGHYVTVGQGCLLRSVTLEDQVVVGDRCVLLEGSLVERQSVLAPGXXXXXXXXXXAGELWAGNPARFVRKLSRDEAAGIVPLANSMAPAVDQHASEFTPVSFAYAEAEAL 240          
BLAST of jgi.p|Trimin1|164861 vs. uniprot
Match: A0A7S3GN43_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GN43_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.610e-37
Identity = 87/191 (45.55%), Postives = 109/191 (57.07%), Query Frame = 0
Query:   45 ARHRPLMILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSSIHVGGLSSVGDKTVINTVAKLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAE 235
            +RHR +M L  K P       FVAPNASVVGDV L D  +IWYGAVLRGDK+ I VG L++V D+ VI+TVA L+TGFPA V IG+ V I  G  +TS  +G++  +G+GS++ EGA           XXX       S Q+W GNPA YV DV  +     K  AE    +   H  EF P    +  AE
Sbjct:   37 SRHRAVMNLYDKRPIIAAGG-FVAPNASVVGDVLLFDEVSIWYGAVLRGDKNKIKVGRLTNVQDRAVISTVANLNTGFPANVEIGDSVTIGHGALITSATIGNRVLVGQGSIIQEGAEXXXXXXXXXXXXXXXXXXXXSNQLWAGNPAVYVRDVTDEESVGIKKSAEHYAEVGRTHGEEFLPFGTTYQAAE 226          
BLAST of jgi.p|Trimin1|164861 vs. uniprot
Match: A0A7S1CBV1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBV1_9STRA)

HSP 1 Score: 140 bits (354), Expect = 2.050e-37
Identity = 77/188 (40.96%), Postives = 115/188 (61.17%), Query Frame = 0
Query:   45 ARHRPLMILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSSIHVGGLSSVGDKTVINTVAKLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFT 232
            ARHRP+  L  K P  +  N FVAP+A+V+G V ++  +++WYGAV+RGD +++ +GG SS+GD+ V++T   +     A   IG+YV +  G  L SC + +   IG G+VV EGA++         XXX  G  +PS Q+W GNPAQ+V ++  + +A F+ +AE    L  EH +EF PA  A+T
Sbjct:   57 ARHRPVQNLYEKHPEVE-NNVFVAPSATVIGHVQILHKSSVWYGAVVRGDVNAVEIGGYSSIGDRAVVSTTKSVEGRPAATCRIGDYVTVGPGALLQSCTIENGVKIGAGAVVMEGALVXXXXXXXXXXXXXXGRRIPSGQLWAGNPAQFVRNLTKEELATFEGDAEFVADLGGEHAHEFLPAGGAYT 243          
BLAST of jgi.p|Trimin1|164861 vs. uniprot
Match: A0A1Z5JC59_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JC59_FISSO)

HSP 1 Score: 136 bits (343), Expect = 2.070e-36
Identity = 78/196 (39.80%), Postives = 114/196 (58.16%), Query Frame = 0
Query:   51 MILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSSIHVGGLSSVGDKTVINT--VAKLS-TGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDLAKKGIT 243
            M   G+ P +   + F+AP+ASV+G+V   D +T+WY AV+R D   I +G  SSVG+ TVI T  V +L  TGFP +  IG+YV I  GC L SC + D  ++G   V+ EG+++E   IL PG        +PS Q WGGNPA YVG++  +   +   EA      ++EH+ EF P   ++ H ED+ K+ ++
Sbjct:    1 MTFRGQKPFQT-NDTFIAPSASVIGNVTNWDQSTVWYKAVVRADTHPITIGFSSSVGEGTVITTLNVEELEETGFPPETHIGHYVTIGAGCILKSCRIDDMVSVGDKCVILEGSLVENNVILEPGTVVMPYQRIPSGQKWGGNPAAYVGELTPEEKEHIPAEALHVHEQAKEHLVEFLPYGYSYVHLEDVEKEQLS 195          
BLAST of jgi.p|Trimin1|164861 vs. uniprot
Match: B7GE20_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GE20_PHATC)

HSP 1 Score: 136 bits (343), Expect = 2.250e-36
Identity = 76/194 (39.18%), Postives = 111/194 (57.22%), Query Frame = 0
Query:   51 MILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKS-SIHVGGLSSVGDKTVINTVA---KLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDLAKK 240
            M   GK P     + F+AP+ASV+GDV   D +++WY AV+R D   SI +G  SSVG+ TV+NT++   +L TG P    IG+YV +  GC L SC V D   +G    + EG+++E   IL PG        +PS Q+W GNPA +V ++  D   + + +A + F  ++EH+ EF P    F H E+L K+
Sbjct:    1 MTFLGKVPFVT-NDTFIAPSASVIGDVTNWDQSSVWYKAVVRADSEHSITIGFCSSVGEGTVVNTLSSTGQLETGLPPDTYIGHYVTVGAGCVLKSCRVDDLVVVGDKCTILEGSLVENHVILKPGTVVMPYQRIPSGQMWAGNPAAFVSELTPDEKEDIQQQALKIFTSTKEHILEFLPYGRTFVHLEELEKQ 193          
BLAST of jgi.p|Trimin1|164861 vs. uniprot
Match: A0A7S3PVX1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PVX1_9STRA)

HSP 1 Score: 137 bits (344), Expect = 4.050e-36
Identity = 80/201 (39.80%), Postives = 115/201 (57.21%), Query Frame = 0
Query:   46 RHRPLMILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSSIHVGGLSSVGDKTVINT----VAKLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCNIGRGSVVCEGAIMEKQSILLPGXXXTTGSLVPSRQIWGGNPAQYVGDVDSDSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDLAKKGI 242
            RHRP M+L G  P K   + F+AP+ASV+G+V   D +++WYGAV+R D   I +G  SSV D+ V+ T    V  + +GFP    IG+YV +  G  LTSC + D   IG   ++ EGA           XXX   + +PS Q W GNPA +V ++D ++  + K  AE+  L ++EH  EF P   ++ H E+L KKG+
Sbjct:   31 RHRPSMMLMGNKPFKT-NDTFIAPSASVIGNVTNWDESSVWYGAVVRADSHPITIGFSSSVQDRAVVTTLSPKVQNMKSGFPPVCHIGHYVSVGAGSILTSCRIEDLVEIGEKCIIEEGAXXXXXXXXXXXXXXPAYTQIPSGQRWAGNPATFVEELDEEAREHIKAAAEKTHLQAQEHALEFLPYGNSYVHLEELEKKGV 230          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|164861 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YZE2_9STRA1.850e-173100.00Trimeric LpxA-like protein n=1 Tax=Tribonema minus... [more]
A0A1E7EZU7_9STRA5.030e-4142.79Gamma carbonic anhydrase n=1 Tax=Fragilariopsis cy... [more]
A0A7S4JY93_9STRA1.530e-3941.29Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A6U3QAK0_9STRA6.070e-3939.80Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A087SU61_AUXPR3.200e-3841.15Gamma carbonic anhydrase-like 1, mitochondrial n=2... [more]
A0A7S3GN43_9STRA1.610e-3745.55Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1CBV1_9STRA2.050e-3740.96Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A1Z5JC59_FISSO2.070e-3639.80Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
B7GE20_PHATC2.250e-3639.18Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A7S3PVX1_9STRA4.050e-3639.80Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.10.10Hexapeptide repeat proteinscoord: 52..221
e-value: 3.2E-32
score: 113.2
NoneNo IPR availablePANTHERPTHR13061DYNACTIN SUBUNIT P25coord: 44..240
NoneNo IPR availablePANTHERPTHR13061:SF29GAMMA CARBONIC ANHYDRASE-LIKE 1, MITOCHONDRIALcoord: 44..240
NoneNo IPR availableCDDcd04645LbH_gamma_CA_likecoord: 63..218
e-value: 3.51603E-47
score: 151.795
IPR011004Trimeric LpxA-like superfamilySUPERFAMILY51161Trimeric LpxA-like enzymescoord: 63..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_33contigContig_33:707376..713147 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164861mRNA_5979Tribonema minus UTEX_B_3156 mRNAContig_33 707376..713147 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|164861|e_gw1.33.16.1 ID=Trimin1|164861|e_gw1.33.16.1|Name=jgi.p|Trimin1|164861|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=245bp
MPHQLCDTLPCSQLQFAKCLLHRSSCLFPEPRNSRTLCSLSLAVARHRPL
MILNGKAPRKDFENCFVAPNASVVGDVDLVDMTTIWYGAVLRGDKSSIHV
GGLSSVGDKTVINTVAKLSTGFPAKVVIGNYVVIEEGCSLTSCMVGDQCN
IGRGSVVCEGAIMEKQSILLPGSVLTTGSLVPSRQIWGGNPAQYVGDVDS
DSVANFKDEAERQFLLSEEHVNEFNPANMAFTHAEDLAKKGITV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011004Trimer_LpxA-like_sf