Trimin1|163730|e_gw1.27.170.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|163730
Unique NameTrimin1|163730|e_gw1.27.170.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length55
Homology
BLAST of jgi.p|Trimin1|163730 vs. uniprot
Match: A0A835YYE3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYE3_9STRA)

HSP 1 Score: 110 bits (276), Expect = 4.910e-31
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0
Query:    1 MPISVAERGTKKWAEIATHIPGRSNKQRRERWLNQLDPTISKITSTTKLGANLN 54
            MPISVAERGTKKWAEIATHIPGRSNKQRRERWLNQLDPTISKITSTTKLGANLN
Sbjct:    1 MPISVAERGTKKWAEIATHIPGRSNKQRRERWLNQLDPTISKITSTTKLGANLN 54          
BLAST of jgi.p|Trimin1|163730 vs. uniprot
Match: A0A836CH87_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH87_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 4.320e-13
Identity = 33/43 (76.74%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    5 VAERGTKKWAEIATHIPGRSNKQRRERWLNQLDPTISKITSTT 47
            VA+ G KKWAEIA HIPGRSN Q RERWLNQLDP ISK   TT
Sbjct:   10 VAQHGLKKWAEIAKHIPGRSNTQCRERWLNQLDPKISKRKWTT 52          
BLAST of jgi.p|Trimin1|163730 vs. uniprot
Match: A0A7S0BN60_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BN60_9RHOD)

HSP 1 Score: 55.1 bits (131), Expect = 5.850e-8
Identity = 24/40 (60.00%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    5 VAERGTKKWAEIATHIPGRSNKQRRERWLNQLDPTISKIT 44
            V + G ++W EIATHI GR+ KQ RERWLNQL+P ++K T
Sbjct:   38 VQKYGARRWTEIATHIHGRTGKQARERWLNQLNPQLTKTT 77          
BLAST of jgi.p|Trimin1|163730 vs. uniprot
Match: F0Y1Q2_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1Q2_AURAN)

HSP 1 Score: 52.8 bits (125), Expect = 6.130e-8
Identity = 22/39 (56.41%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    4 SVAERGTKKWAEIATHIPGRSNKQRRERWLNQLDPTISK 42
            ++   GT+KW+ +A+H+PGR+ KQ RERW NQL+P ISK
Sbjct:   12 AIEANGTRKWSVLASHLPGRTGKQCRERWHNQLNPDISK 50          
BLAST of jgi.p|Trimin1|163730 vs. uniprot
Match: A0A835Z1Q6_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Q6_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 1.360e-7
Identity = 22/46 (47.83%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    8 RGTKKWAEIATHIPGRSNKQRRERWLNQLDPTISKITSTTKLGANL 53
            RG K W ++A H+PGR++KQ RERW++ LDP I+K   T +  A +
Sbjct:    3 RGYKNWGQLAAHMPGRTSKQCRERWIHHLDPAINKSDYTAEEDAKI 48          
BLAST of jgi.p|Trimin1|163730 vs. uniprot
Match: A0A7S3LTQ8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3LTQ8_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 2.140e-7
Identity = 23/34 (67.65%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    9 GTKKWAEIATHIPGRSNKQRRERWLNQLDPTISK 42
            GTK+W+ +A H+PGR+ KQ RERWLNQLDP I K
Sbjct:   24 GTKRWSFVANHLPGRTGKQIRERWLNQLDPNIRK 57          
BLAST of jgi.p|Trimin1|163730 vs. uniprot
Match: M8C9W6_AEGTA (Transcription factor MYB98 n=1 Tax=Aegilops tauschii TaxID=37682 RepID=M8C9W6_AEGTA)

HSP 1 Score: 52.0 bits (123), Expect = 3.230e-7
Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0
Query:    3 ISVAERGTKKWAEIATHIPGRSNKQRRERWLNQLDPTISKIT 44
            + V E G  +WAE+  ++PGRS KQ RERW NQLDP I  I+
Sbjct:   52 VKVQEFGLGRWAEVTLYLPGRSGKQCRERWTNQLDPNIEVIS 93          
BLAST of jgi.p|Trimin1|163730 vs. uniprot
Match: F0Y100_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y100_AURAN)

HSP 1 Score: 51.6 bits (122), Expect = 3.750e-7
Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    5 VAERGTKKWAEIATHIPGRSNKQRRERWLNQLDPTISKITST 46
            V +RG ++W  IA+ +PGR+ KQ RERW NQLDP +SK   T
Sbjct:   14 VTQRGPRRWPTIASAMPGRTGKQCRERWHNQLDPAVSKAPFT 55          
BLAST of jgi.p|Trimin1|163730 vs. uniprot
Match: Q7XZ94_GRIJA (Transforming protein myb (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZ94_GRIJA)

HSP 1 Score: 53.5 bits (127), Expect = 3.750e-7
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    5 VAERGTKKWAEIATHIPGRSNKQRRERWLNQLDPTISK 42
            VA+ G ++W  IA+HIPGR+ KQ RERWLNQL P ++K
Sbjct:   24 VAKLGPRRWTVIASHIPGRTGKQARERWLNQLSPDLAK 61          
BLAST of jgi.p|Trimin1|163730 vs. uniprot
Match: A0A7S0ZEJ7_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZEJ7_9RHOD)

HSP 1 Score: 53.9 bits (128), Expect = 3.930e-7
Identity = 24/42 (57.14%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    5 VAERGTKKWAEIATHIPGRSNKQRRERWLNQLDPTISKITST 46
            V + G ++W+ IA HIPGR+ KQ RERWLNQL P ++KI  T
Sbjct:  121 VEKMGPRRWSLIALHIPGRTGKQARERWLNQLSPALNKIPWT 162          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163730 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YYE3_9STRA4.910e-31100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CH87_9STRA4.320e-1376.74Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A7S0BN60_9RHOD5.850e-860.00Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
F0Y1Q2_AURAN6.130e-856.41Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A835Z1Q6_9STRA1.360e-747.83Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A7S3LTQ8_9EUKA2.140e-767.65Hypothetical protein (Fragment) n=1 Tax=Palpitomon... [more]
M8C9W6_AEGTA3.230e-754.76Transcription factor MYB98 n=1 Tax=Aegilops tausch... [more]
F0Y100_AURAN3.750e-754.76Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
Q7XZ94_GRIJA3.750e-760.53Transforming protein myb (Fragment) n=1 Tax=Griffi... [more]
A0A7S0ZEJ7_9RHOD3.930e-757.14Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 10..44
e-value: 1.1E-6
score: 28.8
NoneNo IPR availableGENE3D1.10.10.60coord: 4..41
e-value: 1.8E-13
score: 52.2
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 1..36
score: 6.957235
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 5..34
e-value: 1.31355E-5
score: 35.629
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..40
score: 14.604262
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 6..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_27contigContig_27:110999..111163 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163730mRNA_6878Tribonema minus UTEX_B_3156 mRNAContig_27 110999..111163 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|163730|e_gw1.27.170.1 ID=Trimin1|163730|e_gw1.27.170.1|Name=jgi.p|Trimin1|163730|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=55bp
MPISVAERGTKKWAEIATHIPGRSNKQRRERWLNQLDPTISKITSTTKLG
ANLN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf