Trimin1|163671|e_gw1.26.16.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|163671
Unique NameTrimin1|163671|e_gw1.26.16.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length321
Homology
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BLAST of jgi.p|Trimin1|163671 vs. uniprot
Match: A0A835YYS3_9STRA (Zinc finger protein 271-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYS3_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 3.180e-10
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 
Query:    1 MCDFEGCDYASAQLSNLVAHERTHTGELPFK 31
            MCDFEGCDYASAQLSNLVAHERTHTGELPFK
Sbjct:    1 MCDFEGCDYASAQLSNLVAHERTHTGELPFK 31
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163671 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YYS3_9STRA3.180e-10100.00Zinc finger protein 271-like protein (Fragment) n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 90..114
e-value: 0.0013
score: 28.0
coord: 60..84
e-value: 0.0038
score: 26.5
coord: 240..264
e-value: 0.0034
score: 26.6
coord: 300..321
e-value: 290.0
score: 0.3
coord: 210..234
e-value: 0.0018
score: 27.6
coord: 180..204
e-value: 0.0033
score: 26.7
coord: 1..24
e-value: 17.0
score: 11.3
coord: 270..294
e-value: 0.0032
score: 26.7
coord: 30..54
e-value: 0.0056
score: 25.9
coord: 120..144
e-value: 0.0071
score: 25.6
coord: 150..174
e-value: 0.0094
score: 25.2
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 180..204
e-value: 0.014
score: 15.8
coord: 90..114
e-value: 0.0022
score: 18.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 272..294
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 212..234
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 32..54
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 122..144
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 182..204
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 242..264
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 62..84
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 270..299
score: 12.590717
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 90..119
score: 14.315716
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 30..59
score: 12.216621
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 240..269
score: 13.318127
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 60..89
score: 12.985598
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 180..209
score: 13.67144
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 210..239
score: 13.525957
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 1..29
score: 11.322948
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 150..179
score: 13.422043
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 120..149
score: 13.359694
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 1..25
e-value: 1.4E-6
score: 29.9
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 87..118
e-value: 1.0E-15
score: 59.2
coord: 146..176
e-value: 1.5E-14
score: 55.5
coord: 119..145
e-value: 1.3E-12
score: 49.3
coord: 238..266
e-value: 1.8E-13
score: 52.0
coord: 267..296
e-value: 6.1E-13
score: 50.3
coord: 177..207
e-value: 4.8E-15
score: 57.1
coord: 26..56
e-value: 1.6E-9
score: 39.4
coord: 208..237
e-value: 4.3E-14
score: 54.0
coord: 57..86
e-value: 4.4E-11
score: 44.4
coord: 297..321
e-value: 1.1E-6
score: 30.3
NoneNo IPR availablePANTHERPTHR19818ZINC FINGER PROTEIN ZIC AND GLIcoord: 44..128
coord: 257..321
coord: 194..278
coord: 2..68
coord: 134..218
coord: 110..195
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 264..320
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 163..217
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 103..157
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 225..277
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 43..97
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 5..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_26contigContig_26:612909..613871 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163671mRNA_1957Tribonema minus UTEX_B_3156 mRNAContig_26 612909..613871 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|163671|e_gw1.26.16.1 ID=Trimin1|163671|e_gw1.26.16.1|Name=jgi.p|Trimin1|163671|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=321bp
MCDFEGCDYASAQLSNLVAHERTHTGELPFKCDFDGCDHACATSGSLVTH
KRTHTSDKPYECDFEGCEYACSTTGSLVTHKRRHTGEKPYKCDFEGCNYA
STNSSSLTAHKRTHTGEKPYKCDFESCDYTCATSGTLVTHKRSHTGEKPF
KCDVQGCDYASAQLSHLVTHKRSHTGEKPFECDFEGCSYACASSSSLVVH
KRTHTGEKPYECEFEGCDYTCSEAGKLTTHKRTHTGEKPYKCDFEGCSFA
CTSSSGLLVHKRTHTGEKPYLCEFQGCDYTCRQAGDLVAHKRTHTGDKPF
KCNFEGCDYASTQTSNLTSHK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf