|
|
Homology
BLAST of jgi.p|Trimin1|163544 vs. uniprot
Match: A0A835Z1J3_9STRA (Tfp pilus assembly protein PilF n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1J3_9STRA) HSP 1 Score: 158 bits (400), Expect = 3.290e-36 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
Query: 791 ASIIRAKQHMDTDTSVTDCLSVDDIDPDEWEGLEDPAEEEVRFKCFQVHEVNCVFVVLQLCVCTQTHASVACSCCAS 867
ASIIRAKQHMDTDTSVTDCLSVDDIDPDEWEGLEDPAEEEVRFKCFQVHEVNCVFVVLQLCVCTQTHASVACSCCAS
Sbjct: 791 ASIIRAKQHMDTDTSVTDCLSVDDIDPDEWEGLEDPAEEEVRFKCFQVHEVNCVFVVLQLCVCTQTHASVACSCCAS 867
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR019734 | Tetratricopeptide repeat | SMART | SM00028 | tpr_5 | coord: 345..378
e-value: 0.022
score: 23.9
coord: 261..294
e-value: 1.1
score: 18.3
coord: 681..714
e-value: 5.0
score: 16.1
coord: 93..126
e-value: 0.3
score: 20.2
coord: 765..798
e-value: 240.0
score: 2.8
coord: 135..168
e-value: 0.46
score: 19.5
coord: 219..252
e-value: 0.27
score: 20.3
coord: 387..420
e-value: 13.0
score: 14.0
coord: 555..588
e-value: 0.37
score: 19.8
coord: 471..504
e-value: 23.0
score: 11.7
coord: 639..672
e-value: 21.0
score: 12.2
coord: 303..336
e-value: 0.4
score: 19.7
coord: 9..42
e-value: 0.072
score: 22.2
coord: 513..546
e-value: 13.0
score: 13.9
coord: 51..84
e-value: 0.53
score: 19.3
coord: 429..462
e-value: 3.2
score: 16.7
coord: 723..756
e-value: 14.0
score: 13.7
coord: 597..630
e-value: 30.0
score: 10.8
coord: 177..210
e-value: 0.14
score: 21.3 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 135..168
score: 8.7619 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 177..210
score: 9.0274 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 261..294
score: 8.3784 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 9..42
score: 8.2899 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 555..588
score: 8.6439 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 51..84
score: 8.7914 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 345..378
score: 9.4404 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 303..336
score: 8.7324 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 166..262
e-value: 9.5E-25
score: 89.5 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 420..582
e-value: 2.7E-54
score: 186.2 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 263..419
e-value: 3.4E-46
score: 159.4 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 597..809
e-value: 3.7E-58
score: 198.3 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 2..165
e-value: 8.4E-52
score: 178.0 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 172..323 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 344..542 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 572..791 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 26..248 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 512..626 |
| None | No IPR available | PFAM | PF13374 | TPR_10 | coord: 92..131
e-value: 1.4E-9
score: 37.5
coord: 302..341
e-value: 6.3E-8
score: 32.2
coord: 512..551
e-value: 8.8E-8
score: 31.8
coord: 638..677
e-value: 1.4E-4
score: 21.6 |
| None | No IPR available | PFAM | PF13424 | TPR_12 | coord: 428..500
e-value: 6.8E-18
score: 64.7
coord: 344..416
e-value: 2.3E-19
score: 69.4
coord: 218..290
e-value: 7.0E-20
score: 71.1
coord: 680..753
e-value: 1.4E-17
score: 63.8
coord: 134..208
e-value: 2.9E-20
score: 72.3
coord: 554..628
e-value: 5.5E-20
score: 71.5
coord: 9..80
e-value: 9.7E-19
score: 67.4 |
| None | No IPR available | PANTHER | PTHR45641 | TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) | coord: 441..700
coord: 527..806
coord: 146..436
coord: 274..574
coord: 10..155 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|163544|e_gw1.26.35.1 ID=Trimin1|163544|e_gw1.26.35.1|Name=jgi.p|Trimin1|163544|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=868bp
MAEDDGLAAVKLIKLAHVLRKRGKLDEAEQSFRRALAIREVAQGPEHAST
ATTLHELAFVLRERGQLEEAEQLFRRALAIEEVALGPEHASTATTLLELA
FVLRERGQLEEAEQLCRRALAIEEVALGPEHASTATTLHELAFVLRERGK
LEEAEQLFRRALAIEEVALGPEHASTATTLHELAFVLRERGKLEEAEQLF
RRALAIDEVALGPEHAFTATTLHELAVVLRERGQLEEAEQLCRRALAIEE
VALGPEHASTATTLHELAVVLRERGKLEEAEQLFRRVLAIEEVALGPEHE
STATALYELALVVRVRGQLEEAEQLFRRALAISEVALGPEHASTATTLYE
LAVVLRERGQLEEAEQLFRRALAIEEVALGPEHASTATTLHELALVLWDR
GQLEAAEQLFRRALAIKVVAQGPEHESTATTLFELAGLLRDRGQLDEAEE
SLRRALAIREVALGPEHASTATTLHALGLVLRERGQLEEAEQLSRRALAI
EEVALGPEHAFTATTLHALACLLRECGQLEEAEQLLRRALAIKEVAQGPE
HASTATTLHGLARVLRERGQLEEAEQLFRRALAIREVAQGPEHASTATTQ
HALGLVLRERGKLDEAEQLFKGALAIKEVAQGPEHESTAATLYALAGVLL
ERSQLQEAEQLYRHVLAINEVAQGPEHASTASTLHQLAFVLGKRSEMEQA
EQLYRRALAIKEVKQGPEHPSTASTLHQLAGVLRKRNQQEEAETLYRRAL
TIKTMTLGPEHPLTANSLQTLAGLLNSQGKQSEAEPLFESASIIRAKQHM
DTDTSVTDCLSVDDIDPDEWEGLEDPAEEEVRFKCFQVHEVNCVFVVLQL
CVCTQTHASVACSCCAS* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
|