Trimin1|160386|e_gw1.13.227.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|160386
Unique NameTrimin1|160386|e_gw1.13.227.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length100
Homology
BLAST of jgi.p|Trimin1|160386 vs. uniprot
Match: A0A835ZJU7_9STRA (YCII domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJU7_9STRA)

HSP 1 Score: 201 bits (512), Expect = 1.130e-65
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
Query:    1 SQLYMLQYTYVEGMLEKRGPHRDAHLQMLGELTQKGECVLGGAFMNPADGAMLLFQTRAAAETFAAQDPYSKAGLITKFNIRDYDAVTGTIMPALLPPQ 99
            SQLYMLQYTYVEGMLEKRGPHRDAHLQMLGELTQKGECVLGGAFMNPADGAMLLFQTRAAAETFAAQDPYSKAGLITKFNIRDYDAVTGTIMPALLPPQ
Sbjct:    1 SQLYMLQYTYVEGMLEKRGPHRDAHLQMLGELTQKGECVLGGAFMNPADGAMLLFQTRAAAETFAAQDPYSKAGLITKFNIRDYDAVTGTIMPALLPPQ 99          
BLAST of jgi.p|Trimin1|160386 vs. uniprot
Match: D8LEJ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEJ2_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 7.180e-27
Identity = 46/85 (54.12%), Postives = 65/85 (76.47%), Query Frame = 0
Query:    8 YTYVEGMLEKRGPHRDAHLQMLGELTQKGECVLGGAFMNPADGAMLLFQTRAAAETFAAQDPYSKAGLITKFNIRDYDAVTGTIM 92
            YTYV+GM++KRGP+R  HL +L  +T++G C+LGGAF+ P DGA+LLF +   A+ F  +DPY+  GL+TK+ IRDY AV GT++
Sbjct:   98 YTYVDGMVDKRGPYRTDHLDLLKAMTEEGTCLLGGAFLEPCDGAVLLFSSPEKAQQFVDKDPYNTGGLVTKYQIRDYMAVVGTML 182          
BLAST of jgi.p|Trimin1|160386 vs. uniprot
Match: UPI000833C2E6 (YciI-like protein n=1 Tax=Sulfurospirillum sp. UCH001 TaxID=1581011 RepID=UPI000833C2E6)

HSP 1 Score: 92.0 bits (227), Expect = 2.560e-22
Identity = 43/91 (47.25%), Postives = 61/91 (67.03%), Query Frame = 0
Query:    4 YMLQYTYVEGMLEKRGPHRDAHLQMLGELTQKGECVLGGAFMNPADGAMLLF--QTRAAAETFAAQDPYSKAGLITKFNIRDYDAVTGTIM 92
            Y+L Y YV+ ++EKR P R+AHL +     + GE +LGGAF NPADGA+L+F  + +A  E F  QDPY + GL+T +NIR++  V G  +
Sbjct:    3 YILFYNYVDNIIEKRVPFREAHLALATSFVESGELLLGGAFANPADGAILIFKVENKAQVEAFVKQDPYVQNGLVTSWNIREWSVVVGAAL 93          
BLAST of jgi.p|Trimin1|160386 vs. uniprot
Match: A0A7S3JUF8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUF8_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 3.410e-21
Identity = 45/94 (47.87%), Postives = 62/94 (65.96%), Query Frame = 0
Query:    4 YMLQYTYVEGMLEKRGPHRDAHLQMLGELTQKGECVLGGAFMNPADGAMLLFQ----TRAAAETFAAQDPYSKAGLITKFNIRDYDAVTGTIMP 93
            Y L+YTYV+GMLEKR P+R AHL  L ++   G+CVLGGAF +P DGA++LF     T+   E FA  DPY    L+  +++ +Y AV G++ P
Sbjct:   55 YALRYTYVDGMLEKRQPYRQAHLDGLKKMADLGKCVLGGAFNDPCDGAVVLFDSSTTTKEEIEAFANVDPYVVNNLVPSWSVSEYMAVVGSLKP 148          
BLAST of jgi.p|Trimin1|160386 vs. uniprot
Match: A0A0G4ERK1_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ERK1_VITBC)

HSP 1 Score: 89.4 bits (220), Expect = 8.560e-21
Identity = 43/90 (47.78%), Postives = 62/90 (68.89%), Query Frame = 0
Query:    5 MLQYTYVEGMLEKRGPHRDAHLQMLGELTQKGECVLGGAFMNPADGAMLLFQ--TRAAAETFAAQDPYSKAGLITKFNIRDYDAVTGTIM 92
            +L+Y+YV  +LEKR PHR  HLQ+L    Q  E +LGGAF NP DGAML+F+  ++   E F +QDPY +  L+T ++IRD+  V G+++
Sbjct:   25 VLRYSYVADVLEKRQPHRSGHLQLLKTFFQPDELLLGGAFANPPDGAMLVFRNVSKERIERFVSQDPYVRNDLVTHWDIRDWSCVVGSVL 114          
BLAST of jgi.p|Trimin1|160386 vs. uniprot
Match: UPI0009318C62 (YciI-like protein n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI0009318C62)

HSP 1 Score: 88.2 bits (217), Expect = 1.110e-20
Identity = 47/99 (47.47%), Postives = 62/99 (62.63%), Query Frame = 0
Query:    4 YMLQYTYVEGMLEKRGPHRDAHLQMLGELTQKGECVLGGAFMNPADGAMLLFQ--TRAAAETFAAQDPYSKAGLITKFNIRDYDAVTG--TIMPALLPP 98
            Y+L Y YV   LE+R P R AH+ +   L ++GE  LGGAF NPADGAM++F   + A AE FA  DPY  AGL+T++ +R++  V G     P  LPP
Sbjct:    3 YVLFYEYVPDYLERREPLRAAHMALAAPLIERGELFLGGAFANPADGAMIVFSGNSPAVAENFAKADPYVAAGLVTRWWVREWTTVVGKDAAQPVKLPP 101          
BLAST of jgi.p|Trimin1|160386 vs. uniprot
Match: A0A6J4II06_9CHLR (YCII domain-containing protein n=1 Tax=uncultured Chloroflexia bacterium TaxID=1672391 RepID=A0A6J4II06_9CHLR)

HSP 1 Score: 89.0 bits (219), Expect = 1.750e-20
Identity = 45/88 (51.14%), Postives = 59/88 (67.05%), Query Frame = 0
Query:    4 YMLQYTYVEGMLEKRGPHRDAHLQMLGELTQKGECVLGGAFMNPADGAMLLFQTRAAA-ETFAAQDPYSKAGLITKFNIRDYDAVTGT 90
            Y+L Y +V+  LE+RG  RD HL +  E   +GE VLGGA  +P DGA+LLFQ  AAA E FAA DPY + GL+T++ +R +  V GT
Sbjct:   48 YLLMYEFVDDYLERRGAFRDEHLGLAWEAHARGELVLGGALADPVDGAILLFQGEAAAAERFAAADPYVRHGLVTRWRVRPWTTVVGT 135          
BLAST of jgi.p|Trimin1|160386 vs. uniprot
Match: A0A7S0EWB9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EWB9_9EUKA)

HSP 1 Score: 87.0 bits (214), Expect = 3.360e-20
Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 0
Query:    3 LYMLQYTYVEGMLEKRGPHRDAHLQMLGELTQKGECVLGGAFMNPADGAMLLFQT-RAAAETFAAQDPYSKAGLITKFNIRDYDAVTGTIMPALLPP 98
            L++L YTY +  LEKR PHR AHL       Q+G+ +LGGA  +P DG +LLF   R  AE FA  DPY++ G++T + +R++  V G++   L  P
Sbjct:    1 LHLLLYTYTDNALEKRAPHRSAHLAAARAAEQRGQLLLGGALADPLDGGVLLFAGGREVAEAFATSDPYTQNGIVTDWTVREWTVVVGSMFAQLPAP 97          
BLAST of jgi.p|Trimin1|160386 vs. uniprot
Match: A0A2E2HG56_9GAMM (YCII domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E2HG56_9GAMM)

HSP 1 Score: 85.9 bits (211), Expect = 6.540e-20
Identity = 40/88 (45.45%), Postives = 62/88 (70.45%), Query Frame = 0
Query:    4 YMLQYTYVEGMLEKRGPHRDAHLQMLGELTQKGECVLGGAFMNPADGAMLLFQT--RAAAETFAAQDPYSKAGLITKFNIRDYDAVTG 89
            ++L Y Y+E +++KR P+R+AHL ++ E  ++GE  L GAF +P DGA+L+F+T  +   E F  QDPY + GL+TK+ IR++  VTG
Sbjct:    3 FLLFYDYIENVVDKRTPYREAHLALVNEYLEQGEIQLAGAFADPVDGAVLVFKTENKEHIEEFVRQDPYVQNGLVTKWRIREWRVVTG 90          
BLAST of jgi.p|Trimin1|160386 vs. uniprot
Match: A0A1A6C2B1_9GAMM (YCII domain-containing protein n=2 Tax=Acidihalobacter TaxID=1765964 RepID=A0A1A6C2B1_9GAMM)

HSP 1 Score: 85.1 bits (209), Expect = 1.390e-19
Identity = 41/91 (45.05%), Postives = 61/91 (67.03%), Query Frame = 0
Query:    4 YMLQYTYVEGMLEKRGPHRDAHLQMLGELTQKGECVLGGAFMNPADGAMLLFQT--RAAAETFAAQDPYSKAGLITKFNIRDYDAVTGTIM 92
            Y+L Y YVE ++E+R P R AHL +  E   +GE +LGGA+ +PADGA L+F+T  R+  E+F A DPY +  L+T + IR++  V G+ +
Sbjct:    3 YILFYDYVENIIERRTPFRQAHLALTEEYVHRGELLLGGAYADPADGAALIFKTEDRSRVESFVANDPYVRNRLVTGWRIREWTVVVGSAL 93          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|160386 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZJU7_9STRA1.130e-65100.00YCII domain-containing protein n=1 Tax=Tribonema m... [more]
D8LEJ2_ECTSI7.180e-2754.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
UPI000833C2E62.560e-2247.25YciI-like protein n=1 Tax=Sulfurospirillum sp. UCH... [more]
A0A7S3JUF8_9STRA3.410e-2147.87Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A0G4ERK1_VITBC8.560e-2147.78Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
UPI0009318C621.110e-2047.47YciI-like protein n=1 Tax=Hyphomicrobium sp. NDB2M... [more]
A0A6J4II06_9CHLR1.750e-2051.14YCII domain-containing protein n=1 Tax=uncultured ... [more]
A0A7S0EWB9_9EUKA3.360e-2043.30Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A2E2HG56_9GAMM6.540e-2045.45YCII domain-containing protein n=1 Tax=Gammaproteo... [more]
A0A1A6C2B1_9GAMM1.390e-1945.05YCII domain-containing protein n=2 Tax=Acidihaloba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005545YCII-relatedPFAMPF03795YCIIcoord: 3..83
e-value: 1.1E-7
score: 32.2
NoneNo IPR availableGENE3D3.30.70.1060Dimeric alpha+beta barrelcoord: 1..87
e-value: 4.3E-16
score: 60.8
NoneNo IPR availablePANTHERPTHR33606PROTEIN YCIIcoord: 2..90
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 3..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_13contigContig_13:585865..587882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160386mRNA_5804Tribonema minus UTEX_B_3156 mRNAContig_13 585865..587882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|160386|e_gw1.13.227.1 ID=Trimin1|160386|e_gw1.13.227.1|Name=jgi.p|Trimin1|160386|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=100bp
SQLYMLQYTYVEGMLEKRGPHRDAHLQMLGELTQKGECVLGGAFMNPADG
AMLLFQTRAAAETFAAQDPYSKAGLITKFNIRDYDAVTGTIMPALLPPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005545YCII
IPR011008Dimeric_a/b-barrel