Trimin1|160175|e_gw1.12.251.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|160175
Unique NameTrimin1|160175|e_gw1.12.251.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length161
Homology
BLAST of jgi.p|Trimin1|160175 vs. uniprot
Match: A0A836CPL7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPL7_9STRA)

HSP 1 Score: 290 bits (742), Expect = 8.690e-99
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
Query:    1 TGPGLHYLYGLLESHIPTTAGGLIPAALHVLLDTFLFDPVFVGTFFLTTALFEGKSMKREVVPQLEREYWPAVVGSWGVSVLFWPLQWACFRYLPLQLRVLSINVCDVAWTAVLSFFSHKPDEDGGEDXXXXXXXXXXXXXXXXARRAQLAFQHAAAASR 160
            TGPGLHYLYGLLESHIPTTAGGLIPAALHVLLDTFLFDPVFVGTFFLTTALFEGKSMKREVVPQLEREYWPAVVGSWGVSVLFWPLQWACFRYLPLQLRVLSINVCDVAWTAVLSFFSHKPDEDGGEDXXXXXXXXXXXXXXXXARRAQLAFQHAAAASR
Sbjct:    1 TGPGLHYLYGLLESHIPTTAGGLIPAALHVLLDTFLFDPVFVGTFFLTTALFEGKSMKREVVPQLEREYWPAVVGSWGVSVLFWPLQWACFRYLPLQLRVLSINVCDVAWTAVLSFFSHKPDEDGGEDXXXXXXXXXXXXXXXXARRAQLAFQHAAAASR 160          
BLAST of jgi.p|Trimin1|160175 vs. uniprot
Match: A0A836CK90_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK90_9STRA)

HSP 1 Score: 211 bits (536), Expect = 4.470e-67
Identity = 96/120 (80.00%), Postives = 109/120 (90.83%), Query Frame = 0
Query:    1 TGPGLHYLYGLLESHIPTTAGGLIPAALHVLLDTFLFDPVFVGTFFLTTALFEGKSMKREVVPQLEREYWPAVVGSWGVSVLFWPLQWACFRYLPLQLRVLSINVCDVAWTAVLSFFSHK 120
            TGPGLH+LYGLLESHIPTTAGG +PAA HVLLDTFLFDPVFV +FF TTALFEG+S++R+V P+L REYWPA+ GSWGVSVLFWP+QWA FRYLPLQLRV SIN+CDVAWTA LS+ SH+
Sbjct:    8 TGPGLHFLYGLLESHIPTTAGGALPAAAHVLLDTFLFDPVFVCSFFFTTALFEGRSLRRDVAPRLAREYWPALRGSWGVSVLFWPVQWAAFRYLPLQLRVASINLCDVAWTAALSYASHR 127          
BLAST of jgi.p|Trimin1|160175 vs. uniprot
Match: A0A6H5JK43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK43_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 8.450e-51
Identity = 80/127 (62.99%), Postives = 102/127 (80.31%), Query Frame = 0
Query:    1 TGPGLHYLYGLLESHIPTTAGGLIPAALHVLLDTFLFDPVFVGTFFLTTALFEGKSMKREVVPQLEREYWPAVVGSWGVSVLFWPLQWACFRYLPLQLRVLSINVCDVAWTAVLSFFSHK--PDEDG 125
            TGP LH LYGLLE  IPT AGG +PAALHV++DTF+FDP+FV +FF  T + E +S+++ ++P L RE+WPAV GSW VS+LF PLQ+A FRYLPL+ RVLS+N CD+AWT+V+S+FSHK  P E G
Sbjct:  251 TGPALHALYGLLECLIPTAAGGFVPAALHVVIDTFVFDPMFVASFFCVTGMLESRSLRKSILPALRREFWPAVQGSWLVSLLFCPLQFATFRYLPLEFRVLSVNACDIAWTSVMSYFSHKAVPTEGG 377          
BLAST of jgi.p|Trimin1|160175 vs. uniprot
Match: D8LRI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI6_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 2.170e-49
Identity = 75/120 (62.50%), Postives = 97/120 (80.83%), Query Frame = 0
Query:    1 TGPGLHYLYGLLESHIPTTAGGLIPAALHVLLDTFLFDPVFVGTFFLTTALFEGKSMKREVVPQLEREYWPAVVGSWGVSVLFWPLQWACFRYLPLQLRVLSINVCDVAWTAVLSFFSHK 120
            TGP LH LYGLLE  IPT  GG +PAALHV++DTF+FDP+FV +FF  T + E + +++ ++P L RE+WPAV GSW VS+LF PLQ+A FRYLPL+ RVLS+N CD+AWT+V+S+FSHK
Sbjct:  251 TGPALHALYGLLECLIPTVGGGFVPAALHVVIDTFVFDPMFVASFFCVTGMLESRPLRKSILPALRREFWPAVQGSWLVSLLFCPLQFATFRYLPLEFRVLSVNACDIAWTSVMSYFSHK 370          
BLAST of jgi.p|Trimin1|160175 vs. uniprot
Match: A0A7S3XMM5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMM5_HETAK)

HSP 1 Score: 140 bits (354), Expect = 4.210e-39
Identity = 68/125 (54.40%), Postives = 88/125 (70.40%), Query Frame = 0
Query:    1 TGPGLHYLYGLLESHIPTTAGGLIPAALHVLLDTFLFDPVFVGTFFLTTALFEGKSMKREVVPQLEREYWPAVVGSWGVSVLFWPLQWACFRYLPLQLRVLSINVCDVAWTAVLSFFSHKPDEDG 125
            TGP LH  Y LLE  +PT  GG +PA LHV  DTFL DP+FV TFFLTT LFE + +  + +P+L RE+  A+ GSW VS +  P+Q+A FRY+P++ RVL +N  D+AWTA +SFFSHK   +G
Sbjct:   88 TGPILHLAYELLEHLVPTEGGGALPAVLHVAADTFLLDPLFVCTFFLTTGLFERRPLWADTLPRLRREFPAALRGSWSVSAVCLPVQFASFRYVPVRYRVLLVNCIDLAWTATMSFFSHKESAEG 212          
BLAST of jgi.p|Trimin1|160175 vs. uniprot
Match: W7TTT3_9STRA (Mpv17/PMP22 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTT3_9STRA)

HSP 1 Score: 144 bits (362), Expect = 8.520e-39
Identity = 67/120 (55.83%), Postives = 87/120 (72.50%), Query Frame = 0
Query:    1 TGPGLHYLYGLLESHIPTTAGGLIPAALHVLLDTFLFDPVFVGTFFLTTALFEGKSMKREVVPQLEREYWPAVVGSWGVSVLFWPLQWACFRYLPLQLRVLSINVCDVAWTAVLSFFSHK 120
            TGPGLHYLY  LES +P   G  + A  HV +D F+FDP+FV  FF    L EGK + R++ PQ++REYW A+ G WGVS++F PL++A FR LPL+LRVL +N+ DV WTAV+SFF H+
Sbjct:  225 TGPGLHYLYTALESWMPAQRG-FLAAFTHVAVDEFIFDPLFVLCFFFLCGLIEGKHLSRDIFPQVQREYWSALKGGWGVSIMFLPLEFATFRCLPLRLRVLVVNLTDVVWTAVVSFFGHR 343          
BLAST of jgi.p|Trimin1|160175 vs. uniprot
Match: A0A6U1B1H0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1B1H0_9STRA)

HSP 1 Score: 111 bits (278), Expect = 3.170e-27
Identity = 53/122 (43.44%), Postives = 77/122 (63.11%), Query Frame = 0
Query:    1 TGPGLHYLYGLLESHIPTTAGGLIPAALHVLLDTFLFDPVFVGTFFLTTALFEGKSMKREVVPQLEREYWPAVVGSWGVSVLFWPLQWACFRYLPLQLRVLSINVCDVAWTAVLSFFSHKPD 122
            TGP LHY Y LLE  IP+  G +    + + +D  +FDP+ + TFF TT+L E K    ++V +L  +YW    G +GVS    P+Q+  FRY+P++ RVL +N+CD+AWT+V+S  SH  D
Sbjct:  126 TGPSLHYGYALLERVIPSVGGPVWATLIQITVDELIFDPIDIATFFCTTSLIERK----DLVQRLRNDYWSTFWGGFGVSFACTPIQFISFRYMPVKTRVLVVNLCDLAWTSVVSVLSHAQD 243          
BLAST of jgi.p|Trimin1|160175 vs. uniprot
Match: A0A7S1CXF3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CXF3_CYCTE)

HSP 1 Score: 106 bits (265), Expect = 2.480e-26
Identity = 50/120 (41.67%), Postives = 73/120 (60.83%), Query Frame = 0
Query:    1 TGPGLHYLYGLLESHIPTTAGGLIPAALHVLLDTFLFDPVFVGTFFLTTALFEGKSMKREVVPQLEREYWPAVVGSWGVSVLFWPLQWACFRYLPLQLRVLSINVCDVAWTAVLSFFSHK 120
            +GP +H  Y   E  +P +  G + A +HV  D+ + D +FV T FL T L EG S +R +VPQ   +Y  A+  SW  S    PL++ACFR+LP+ LR L+IN  D+ W A++SF +H+
Sbjct:   34 SGPIMHLGYDAFERVLPVS--GTLAALVHVCADSIVLDSIFVATAFLVTGLLEGYSFRRHIVPQFRTDYTAALKASWVTSFTMMPLEFACFRFLPVALRTLAINCTDIVWDAIISFMAHR 151          
BLAST of jgi.p|Trimin1|160175 vs. uniprot
Match: A0A7S4AQV4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AQV4_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.370e-23
Identity = 50/133 (37.59%), Postives = 80/133 (60.15%), Query Frame = 0
Query:    1 TGPGLHYLYGLLESHIPTTAGG---LIPAALHVLLDTFLFDPVFVGTFFLTTALFEGKSMKREVVPQLEREYWPAVVGSWGVSVLFWPLQWACFRYLPLQLRVLSINVCDVAWTAVLSFFSHK----PDEDGG 126
            +GP LH+ Y L+E+ IPTT GG   +  A  H L+D F+ D +F+ T F++T + EG    RE++PQ  ++++P +   W   +   P+Q+  FR+ PL LRVL +N+ D+ W A +S+  H+    P E+ G
Sbjct:  241 SGPLLHFSYNLMEAFIPTTNGGRSAIFAALTHALIDNFVLDTIFLATMFVSTGIAEG--YVREIIPQFRKDFFPTLRMGWLAGICLLPVQFLLFRFFPLSLRVLGVNIIDIFWGAYVSYMVHRRRRQPQENNG 371          
BLAST of jgi.p|Trimin1|160175 vs. uniprot
Match: A0A7S2M641_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M641_9STRA)

HSP 1 Score: 101 bits (251), Expect = 4.600e-23
Identity = 55/122 (45.08%), Postives = 70/122 (57.38%), Query Frame = 0
Query:    3 PGLHYLYGLLESHIPTTAGGL-----IPAALHVLLDTFLFDPVFVGTFFLTTALFEGKSMKREVVPQLEREYWPAVVGSWGVSVLFWPLQWACFRYLPLQLRVLSINVCDVAWTAVLSFFSH 119
            P +HY Y L E+ +PT  GG      I A  HVL D  L D +FV T  + T L EG   +++V+P L R Y P +  S     L  PLQ+  FR+LPL LRVLS+N  D+ WT V+SF SH
Sbjct:  155 PLMHYGYDLFETVVPTVGGGSALYRSIAALTHVLADCVLLDAIFVMTGIVFTGLLEGHRFRQQVIPNLRRVYLPTLKASVMTCGLLAPLQFLSFRFLPLSLRVLSVNAVDLIWTGVISFVSH 276          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|160175 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CPL7_9STRA8.690e-99100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CK90_9STRA4.470e-6780.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JK43_9PHAE8.450e-5162.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRI6_ECTSI2.170e-4962.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3XMM5_HETAK4.210e-3954.40Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W7TTT3_9STRA8.520e-3955.83Mpv17/PMP22 n=2 Tax=Monodopsidaceae TaxID=425072 R... [more]
A0A6U1B1H0_9STRA3.170e-2743.44Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1CXF3_CYCTE2.480e-2641.67Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S4AQV4_9STRA1.370e-2337.59Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S2M641_9STRA4.600e-2345.08Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 50..115
e-value: 8.0E-16
score: 58.0
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 1..120
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 1..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_12contigContig_12:525076..528251 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160175mRNA_3744Tribonema minus UTEX_B_3156 mRNAContig_12 525076..528251 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|160175|e_gw1.12.251.1 ID=Trimin1|160175|e_gw1.12.251.1|Name=jgi.p|Trimin1|160175|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=161bp
TGPGLHYLYGLLESHIPTTAGGLIPAALHVLLDTFLFDPVFVGTFFLTTA
LFEGKSMKREVVPQLEREYWPAVVGSWGVSVLFWPLQWACFRYLPLQLRV
LSINVCDVAWTAVLSFFSHKPDEDGGEDAQQQQQRQHQGYVAAAARRAQL
AFQHAAAASR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22