Trimin1|158732|e_gw1.6.337.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|158732
Unique NameTrimin1|158732|e_gw1.6.337.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length104
Homology
BLAST of jgi.p|Trimin1|158732 vs. uniprot
Match: A0A835YXN5_9STRA (Ribosomal protein S8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXN5_9STRA)

HSP 1 Score: 208 bits (529), Expect = 3.850e-68
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
Query:    1 MCVFSALFVSPGKQEGEQATQPVSATRDSLLNLNFTSFQVSDPKILSLKHISKPSKNIYFSSQDLWIFDRSLGLIILNTSHGIMSHKTALSKNLGGQALCYIF 103
            MCVFSALFVSPGKQEGEQATQPVSATRDSLLNLNFTSFQVSDPKILSLKHISKPSKNIYFSSQDLWIFDRSLGLIILNTSHGIMSHKTALSKNLGGQALCYIF
Sbjct:    1 MCVFSALFVSPGKQEGEQATQPVSATRDSLLNLNFTSFQVSDPKILSLKHISKPSKNIYFSSQDLWIFDRSLGLIILNTSHGIMSHKTALSKNLGGQALCYIF 103          
BLAST of jgi.p|Trimin1|158732 vs. uniprot
Match: A0A7C3HGS1_9BACT (30S ribosomal protein S8 n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7C3HGS1_9BACT)

HSP 1 Score: 61.2 bits (147), Expect = 9.490e-10
Identity = 26/61 (42.62%), Postives = 42/61 (68.85%), Query Frame = 0
Query:   43 PKILSLKHISKPSKNIYFSSQDLWIFDRSLGLIILNTSHGIMSHKTALSKNLGGQALCYIF 103
            P I  LK ISKP + +Y S+  +     +LG+ IL+TS G+++HK AL +++GG+ LCY++
Sbjct:   72 PAITGLKRISKPGRRVYVSADKVPRVMNNLGIAILSTSRGVITHKQALREHIGGEVLCYVW 132          
BLAST of jgi.p|Trimin1|158732 vs. uniprot
Match: UPI001A14384A (30S ribosomal protein S8 n=1 Tax=Rickettsia sp. TaxID=789 RepID=UPI001A14384A)

HSP 1 Score: 60.8 bits (146), Expect = 1.280e-9
Identity = 29/75 (38.67%), Postives = 45/75 (60.00%), Query Frame = 0
Query:   29 SLLNLNFTSFQVSDPKILSLKHISKPSKNIYFSSQDLWIFDRSLGLIILNTSHGIMSHKTALSKNLGGQALCYIF 103
            ++LN+     + S P I  +  +SKPS+  Y S   +  F   LG+ IL+TS G++SHK A + N+GG+ LC +F
Sbjct:   56 NILNIKLKYTKNSSPVIKEISRVSKPSRRFYTSVNKIRNFYNGLGIQILSTSKGVLSHKDAKALNVGGEILCKVF 130          
BLAST of jgi.p|Trimin1|158732 vs. uniprot
Match: A0A1F5S3K3_9BACT (30S ribosomal protein S8 n=1 Tax=Candidatus Falkowbacteria bacterium RBG_13_39_14 TaxID=1797985 RepID=A0A1F5S3K3_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 1.010e-8
Identity = 25/61 (40.98%), Postives = 40/61 (65.57%), Query Frame = 0
Query:   43 PKILSLKHISKPSKNIYFSSQDLWIFDRSLGLIILNTSHGIMSHKTALSKNLGGQALCYIF 103
            P +  LK +SKPS+ IY S ++L     + G+ I++TS GIMS+K A  K +GG+ +C ++
Sbjct:   70 PSVTVLKRVSKPSRRIYVSKENLPTVLNNFGIAIISTSQGIMSNKEAKKKGIGGEVICEVY 130          
BLAST of jgi.p|Trimin1|158732 vs. uniprot
Match: A0A2E9UCM1_9CHLR (30S ribosomal protein S8 n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2E9UCM1_9CHLR)

HSP 1 Score: 58.5 bits (140), Expect = 1.030e-8
Identity = 36/93 (38.71%), Postives = 52/93 (55.91%), Query Frame = 0
Query:   13 KQEGEQATQPVSATRDSL--LNLNFTSFQVSDPKILSLKHISKPSKNIYFSSQDLWIFDRSLGLIILNTSHGIMSHKTALSKNLGGQALCYIF 103
            K+EG      V  T D +  LNLN +      P+I  LK ISKP   IY    ++  +   LG+ I++TS GIM+HK A  ++LGG+ +C I+
Sbjct:   40 KEEGFITNYQVE-TEDRMKNLNLNLSYKPEGTPQINGLKRISKPGLRIYSRKGEIPRYYGDLGVTIVSTSKGIMTHKQAWKESLGGEVICVIW 131          
BLAST of jgi.p|Trimin1|158732 vs. uniprot
Match: A0A2E7VTM9_9CHLR (30S ribosomal protein S8 n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2E7VTM9_9CHLR)

HSP 1 Score: 57.4 bits (137), Expect = 2.870e-8
Identity = 27/73 (36.99%), Postives = 43/73 (58.90%), Query Frame = 0
Query:   31 LNLNFTSFQVSDPKILSLKHISKPSKNIYFSSQDLWIFDRSLGLIILNTSHGIMSHKTALSKNLGGQALCYIF 103
            +NLN +      P+I  L+ ISKP   +Y    ++  +   LG+ I++TS+GIMSHK A    LGG+ +C ++
Sbjct:   59 INLNLSYKNEGTPRINGLRRISKPGLRVYSRKGEIPRYFGGLGVTIVSTSNGIMSHKEAWKNRLGGEVMCVVW 131          
BLAST of jgi.p|Trimin1|158732 vs. uniprot
Match: A6YEC2_CHLAT (Ribosomal protein S8 n=1 Tax=Chlorokybus atmophyticus TaxID=3144 RepID=A6YEC2_CHLAT)

HSP 1 Score: 56.6 bits (135), Expect = 4.940e-8
Identity = 25/61 (40.98%), Postives = 40/61 (65.57%), Query Frame = 0
Query:   43 PKILSLKHISKPSKNIYFSSQDLWIFDRSLGLIILNTSHGIMSHKTALSKNLGGQALCYIF 103
            P I  +K IS+PS  +Y SS ++ ++ R +G+I+L+T +GI S   A  + LGG+ LC +F
Sbjct:   64 PVINKIKRISRPSNRVYLSSNNISLYKRGVGIILLSTRNGIYSDIDARLQGLGGEILCQVF 124          
BLAST of jgi.p|Trimin1|158732 vs. uniprot
Match: A0A7C6ESS8_9BACT (30S ribosomal protein S8 n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C6ESS8_9BACT)

HSP 1 Score: 56.6 bits (135), Expect = 5.810e-8
Identity = 25/61 (40.98%), Postives = 39/61 (63.93%), Query Frame = 0
Query:   43 PKILSLKHISKPSKNIYFSSQDLWIFDRSLGLIILNTSHGIMSHKTALSKNLGGQALCYIF 103
            P I  LK +SKP + IY     +     +LG+ IL+TS GI++HK AL  ++GG+ +CY++
Sbjct:   72 PAITGLKRVSKPGRKIYVGVDKMPRVMNNLGIAILSTSKGIVTHKQALRDHVGGEIICYVW 132          
BLAST of jgi.p|Trimin1|158732 vs. uniprot
Match: A0A536C2L7_9CHLR (30S ribosomal protein S8 n=15 Tax=unclassified Chloroflexi TaxID=189774 RepID=A0A536C2L7_9CHLR)

HSP 1 Score: 56.2 bits (134), Expect = 8.180e-8
Identity = 30/92 (32.61%), Postives = 49/92 (53.26%), Query Frame = 0
Query:   13 KQEGEQATQPVSATRDSL-LNLNFTSFQVSDPKILSLKHISKPSKNIYFSSQDLWIFDRSLGLIILNTSHGIMSHKTALSKNLGGQALCYIF 103
            K+EG  A+  V+A      L++ F         +  L+ ISKP   +Y    ++      LG++IL+TSHG+MS + A    LGG+ +CY++
Sbjct:   41 KEEGYIASYDVAAAEQGQKLDITFKPKSPRGKSLAGLRRISKPGLRVYARKTEIPRVLGGLGIVILSTSHGVMSGQKATKAGLGGEVVCYVW 132          
BLAST of jgi.p|Trimin1|158732 vs. uniprot
Match: A0A661J8R1_9DELT (30S ribosomal protein S8 n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661J8R1_9DELT)

HSP 1 Score: 56.2 bits (134), Expect = 8.180e-8
Identity = 25/69 (36.23%), Postives = 41/69 (59.42%), Query Frame = 0
Query:   35 FTSFQVSDPKILSLKHISKPSKNIYFSSQDLWIFDRSLGLIILNTSHGIMSHKTALSKNLGGQALCYIF 103
            F  +  +   I+ LK +SKPS+ +Y S  ++      LG+ IL+TS GI++ K A   N+GG+ LC ++
Sbjct:   64 FLKYDSNKQGIIHLKRVSKPSRRVYVSKDEIPFVKNGLGIAILSTSKGILTDKMARKANVGGEILCEVW 132          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|158732 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YXN5_9STRA3.850e-68100.00Ribosomal protein S8 n=1 Tax=Tribonema minus TaxID... [more]
A0A7C3HGS1_9BACT9.490e-1042.6230S ribosomal protein S8 n=1 Tax=Bacteroidetes bac... [more]
UPI001A14384A1.280e-938.6730S ribosomal protein S8 n=1 Tax=Rickettsia sp. Ta... [more]
A0A1F5S3K3_9BACT1.010e-840.9830S ribosomal protein S8 n=1 Tax=Candidatus Falkow... [more]
A0A2E9UCM1_9CHLR1.030e-838.7130S ribosomal protein S8 n=1 Tax=Chloroflexi bacte... [more]
A0A2E7VTM9_9CHLR2.870e-836.9930S ribosomal protein S8 n=2 Tax=Chloroflexi bacte... [more]
A6YEC2_CHLAT4.940e-840.98Ribosomal protein S8 n=1 Tax=Chlorokybus atmophyti... [more]
A0A7C6ESS8_9BACT5.810e-840.9830S ribosomal protein S8 n=1 Tax=bacterium TaxID=1... [more]
A0A536C2L7_9CHLR8.180e-832.6130S ribosomal protein S8 n=15 Tax=unclassified Chl... [more]
A0A661J8R1_9DELT8.180e-836.2330S ribosomal protein S8 n=1 Tax=Deltaproteobacter... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000630Ribosomal protein S8PFAMPF00410Ribosomal_S8coord: 32..103
e-value: 1.4E-15
score: 57.3
NoneNo IPR availableGENE3D3.30.1490.10coord: 47..103
e-value: 2.0E-19
score: 70.8
IPR035987Ribosomal protein S8 superfamilySUPERFAMILY56047Ribosomal protein S8coord: 32..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_6contigContig_6:51809..52120 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158732mRNA_2038Tribonema minus UTEX_B_3156 mRNAContig_6 51809..52120 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|158732|e_gw1.6.337.1 ID=Trimin1|158732|e_gw1.6.337.1|Name=jgi.p|Trimin1|158732|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=104bp
MCVFSALFVSPGKQEGEQATQPVSATRDSLLNLNFTSFQVSDPKILSLKH
ISKPSKNIYFSSQDLWIFDRSLGLIILNTSHGIMSHKTALSKNLGGQALC
YIF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000630Ribosomal_S8
IPR035987Ribosomal_S8_sf