Trimin1|158683|e_gw1.6.24.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|158683
Unique NameTrimin1|158683|e_gw1.6.24.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length175
Homology
BLAST of jgi.p|Trimin1|158683 vs. uniprot
Match: A0A835YRC6_9STRA (SEP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRC6_9STRA)

HSP 1 Score: 331 bits (848), Expect = 1.780e-114
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
Query:    1 MRQLDAATGGNAAPLLAAERENQRLRRQVEEMETFLNDYGLKWVGTSSGXXXXXXXXXIDTDRDVLLPWTEGAATVPQLDLDLLIARIHDLNTIILEERGGGVVRSGRRARLSRPDTVALSIYADGLSLGGEGSCLRRYDAVDTQAFIRDVLDGFFPSELRRRYPDGFLTEVQDR 175
            MRQLDAATGGNAAPLLAAERENQRLRRQVEEMETFLNDYGLKWVGTSSGXXXXXXXXXIDTDRDVLLPWTEGAATVPQLDLDLLIARIHDLNTIILEERGGGVVRSGRRARLSRPDTVALSIYADGLSLGGEGSCLRRYDAVDTQAFIRDVLDGFFPSELRRRYPDGFLTEVQDR
Sbjct:    1 MRQLDAATGGNAAPLLAAERENQRLRRQVEEMETFLNDYGLKWVGTSSGXXXXXXXXXIDTDRDVLLPWTEGAATVPQLDLDLLIARIHDLNTIILEERGGGVVRSGRRARLSRPDTVALSIYADGLSLGGEGSCLRRYDAVDTQAFIRDVLDGFFPSELRRRYPDGFLTEVQDR 175          
BLAST of jgi.p|Trimin1|158683 vs. uniprot
Match: A0A7S2SMP3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SMP3_9STRA)

HSP 1 Score: 124 bits (311), Expect = 6.900e-32
Identity = 63/156 (40.38%), Postives = 91/156 (58.33%), Query Frame = 0
Query:   20 RENQRLRRQVEEMETFLNDYGLKWVGTSSGXXXXXXXXXIDTDRDVLLPWTEGAATVPQLDLDLLIARIHDLNTIILEERGGGVVRSGRRARLSRPDTVALSIYADGLSLGGEGSCLRRYDAVDTQAFIRDVLDGFFPSELRRRYPDGFLTEVQDR 175
            +ENQ LR+Q+ EMETFL DYGL WVG  +G            +R    P  E     P +D DL++ ++ +LN + L+E G  VV  GR+A+    D V+L+++ADGL++  +G   R +    T  F+ D++DGFFP E +  YPDG L  VQD+
Sbjct:   79 KENQALRQQIHEMETFLADYGLIWVGAKAGDAEG------SDERAPACPGPESKEEGPAIDFDLMVRKVKELNGL-LDEVGPQVVSDGRKAKFEDQDVVSLTLFADGLTV--QGGAFRPFHEATTMTFVNDIVDGFFPHEFKEAYPDGVLLTVQDQ 225          
BLAST of jgi.p|Trimin1|158683 vs. uniprot
Match: UPI0005227209 (LOW QUALITY PROTEIN: UBX domain-containing protein 11 n=1 Tax=Leptosomus discolor TaxID=188344 RepID=UPI0005227209)

HSP 1 Score: 106 bits (264), Expect = 6.580e-24
Identity = 58/154 (37.66%), Postives = 85/154 (55.19%), Query Frame = 0
Query:   24 RLRRQVEEMETFLNDYGLKWVGTSSGXXXXXXXXXIDTDRDVLLPWTEGAATVPQ--LDLDLLIARIHDLNTIILEERGGGVVRSGRRARLSRPDTVALSIYADGLSLGGEGSCLRRYDAVDTQAFIRDVLDGFFPSELRRRYPDGFLTEVQDR 175
            +L+ QV EME FLNDYGL WVG              + +      W  G A V +  +D DL++  + DLN ++  E G  +  +   ARL +P+ + L +Y +G+  G  G   R Y+   TQ F++D++DG+FPSEL+ RYPDG   +V DR
Sbjct:   68 QLQTQVWEMERFLNDYGLIWVGERHEQLEDFESLKDEEELPARSLWKPGEAVVSKHRIDFDLILENVKDLN-VLAGEGGSQIEHTPGGARLRQPEPLLLMLYQNGIITGFNGP-FRPYEDPSTQQFLQDIMDGYFPSELQMRYPDGIPLQVTDR 219          
BLAST of jgi.p|Trimin1|158683 vs. uniprot
Match: A0A099ZUU6_TINGU (UBX domain-containing protein 11 (Fragment) n=2 Tax=Tinamus guttatus TaxID=94827 RepID=A0A099ZUU6_TINGU)

HSP 1 Score: 102 bits (253), Expect = 2.490e-23
Identity = 56/154 (36.36%), Postives = 87/154 (56.49%), Query Frame = 0
Query:   24 RLRRQVEEMETFLNDYGLKWVGTSSGXXXXXXXXXIDTDRDVLLPWTEGA--ATVPQLDLDLLIARIHDLNTIILEERGGGVVRSGRRARLSRPDTVALSIYADGLSLGGEGSCLRRYDAVDTQAFIRDVLDGFFPSELRRRYPDGFLTEVQDR 175
            RL+ QV EME FLNDYGL WVG S            + +      W  G   A+  Q+D DL++  + DLN +  E     +  + + ARL +P+++ L++Y DG+ +G      R Y+   +Q ++RD++DG+FPSEL+ RYP+G   +V D+
Sbjct:   70 RLQTQVWEMERFLNDYGLIWVGESHEQLEDLEACKDEEELPARRLWKPGETIASKFQIDFDLVLENVKDLNALAGEGLSE-IEHTPQGARLRQPESLPLTLYGDGMVMGN--GPFRPYEEPSSQQYLRDIMDGYFPSELQPRYPNGVPLQVTDK 220          
BLAST of jgi.p|Trimin1|158683 vs. uniprot
Match: A0A8D0DJ55_9SAUR (UBX domain protein 11 n=2 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0DJ55_9SAUR)

HSP 1 Score: 104 bits (259), Expect = 5.760e-23
Identity = 58/154 (37.66%), Postives = 88/154 (57.14%), Query Frame = 0
Query:   24 RLRRQVEEMETFLNDYGLKWVGTSSGXXXXXXXXXIDTDRDVLLPWTEGAATVPQ--LDLDLLIARIHDLNTIILEERGGGVVRSGRRARLSRPDTVALSIYADGLSLGGEGSCLRRYDAVDTQAFIRDVLDGFFPSELRRRYPDGFLTEVQDR 175
            +L+RQ+ EME FLNDYGL WVG  +           + D+ +   W  G A V +  +DLDL++  + DLN +  E     + R+   ARL + D+V L+ Y +G+ +       R Y+   TQ  +RD++DG+FPSEL+RRYP+G   +V D+
Sbjct:  141 QLKRQIWEMERFLNDYGLIWVGEGTETLEELELLKEEEDQPLRSLWKPGDAVVSERPIDLDLILENLKDLNALAGEGMSQ-IERTAGGARLRQLDSVPLTFYQNGIVMFN--GPFRSYEEPSTQRCLRDLMDGYFPSELQRRYPEGVPFQVTDK 291          
BLAST of jgi.p|Trimin1|158683 vs. uniprot
Match: UPI001553551F (UBX domain-containing protein 11 isoform X1 n=2 Tax=Trachemys scripta elegans TaxID=31138 RepID=UPI001553551F)

HSP 1 Score: 101 bits (252), Expect = 2.420e-22
Identity = 57/154 (37.01%), Postives = 87/154 (56.49%), Query Frame = 0
Query:   24 RLRRQVEEMETFLNDYGLKWVGTSSGXXXXXXXXXIDTDRDVLLPWTEGAATVPQ--LDLDLLIARIHDLNTIILEERGGGVVRSGRRARLSRPDTVALSIYADGLSLGGEGSCLRRYDAVDTQAFIRDVLDGFFPSELRRRYPDGFLTEVQDR 175
            +L+ QV EME FLNDYGL WVG ++              R +   W  G +TV +  +D DL++  + DLN ++  E    + R+   ARL +P ++AL+ Y +G+ +       R Y+   TQ  ++D++DG+FPSEL+ RYPDG   +V DR
Sbjct:  140 QLQNQVWEMERFLNDYGLIWVGENNEQLKSLKKQENQPSRSL---WKPGDSTVSKHLIDFDLILENLKDLN-VLAGEGVSQIERTAGGARLRQPQSIALTFYQNGIVMFN--GPFRSYEEPSTQQCLQDIMDGYFPSELQTRYPDGVPFQVTDR 287          
BLAST of jgi.p|Trimin1|158683 vs. uniprot
Match: A0A8C3ILU2_CHRPI (UBX domain protein 11 n=24 Tax=Durocryptodira TaxID=1579337 RepID=A0A8C3ILU2_CHRPI)

HSP 1 Score: 102 bits (254), Expect = 2.850e-22
Identity = 58/154 (37.66%), Postives = 87/154 (56.49%), Query Frame = 0
Query:   24 RLRRQVEEMETFLNDYGLKWVGTSSGXXXXXXXXXIDTDRDVLLPWTEGAATVPQ--LDLDLLIARIHDLNTIILEERGGGVVRSGRRARLSRPDTVALSIYADGLSLGGEGSCLRRYDAVDTQAFIRDVLDGFFPSELRRRYPDGFLTEVQDR 175
            +L+ QV EME FLNDYGL WVG S+              R +   W  G +TV +  +D DL++  + DLN ++  E    + R+   ARL +P ++AL+ Y +G+ +       R Y+   TQ  ++D++DG+FPSEL+ RYPDG   +V DR
Sbjct:  140 QLQNQVWEMERFLNDYGLIWVGESNEQLKSLKKQENQPSRGL---WKPGDSTVSKHLIDFDLILENLKDLN-VLAGEGVSQIERTAGGARLRQPQSIALTFYQNGIVMFN--GPFRSYEEPSTQQCLQDIMDGYFPSELQTRYPDGVPFQVTDR 287          
BLAST of jgi.p|Trimin1|158683 vs. uniprot
Match: W5K3H7_ASTMX (UBX domain protein 11 n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=W5K3H7_ASTMX)

HSP 1 Score: 102 bits (254), Expect = 3.030e-22
Identity = 67/155 (43.23%), Postives = 95/155 (61.29%), Query Frame = 0
Query:   24 RLRRQVEEMETFLNDYGLKWVGTSSGXXXXXXXXXIDTDRDVLLPWTEGAATVP--QLDLDLLIARIHDLNTIILEERGGGVVRS-GRRARLSRPDTVALSIYADGLSLGGEGSCLRRYDAVDTQAFIRDVLDGFFPSELRRRYPDGFLTEVQDR 175
            +L+RQV EME FLNDYG+ WVG    XXXXXXX    ++  +   W  GA+ VP   ++ DL++  + DLN  IL   G   V S    ARL+RPD V+L +Y +G+ +       R Y    TQ  ++D++DG+FPSEL+ R+PDG + ++QDR
Sbjct:  142 KLQRQVWEMEKFLNDYGMIWVGNGEDXXXXXXXEEAVSEDQL---WRPGASVVPGFSVNFDLVVQNVLDLN--ILAGEGESCVTSVPGGARLTRPDPVSLQLYKNGIVMFN--GPFRSYQDPSTQRCMQDLMDGYFPSELQDRFPDGVIFQIQDR 289          
BLAST of jgi.p|Trimin1|158683 vs. uniprot
Match: A0A1U8CZ30_ALLSI (UBX domain-containing protein 11 n=5 Tax=Crocodylia TaxID=1294634 RepID=A0A1U8CZ30_ALLSI)

HSP 1 Score: 102 bits (253), Expect = 3.980e-22
Identity = 56/154 (36.36%), Postives = 86/154 (55.84%), Query Frame = 0
Query:   24 RLRRQVEEMETFLNDYGLKWVGTSSGXXXXXXXXXIDTDRDVLLPWTEGAATVPQ--LDLDLLIARIHDLNTIILEERGGGVVRSGRRARLSRPDTVALSIYADGLSLGGEGSCLRRYDAVDTQAFIRDVLDGFFPSELRRRYPDGFLTEVQDR 175
            +L+RQV EME FLNDYGL WVG  +           +      + W  G +T P+  +D DL++  + DLN ++  E    +  +   ARL  P++V+L++Y +G+ +       R Y+   TQ  +RD+LDG+FPSEL+ RYP G   +V D+
Sbjct:  140 QLQRQVWEMERFLNDYGLIWVGEKNAELEDLESSGKEASWPSRVFWKPGDSTAPKPPIDFDLILENLKDLN-VLAGEGVSQIQHTAGGARLREPESVSLTLYKNGIVMFS--GPFRSYEEPSTQQCLRDILDGYFPSELQARYPAGVPFQVTDK 290          
BLAST of jgi.p|Trimin1|158683 vs. uniprot
Match: UPI0018F69A96 (UBX domain-containing protein 11 n=1 Tax=Tachyglossus aculeatus TaxID=9261 RepID=UPI0018F69A96)

HSP 1 Score: 101 bits (252), Expect = 8.350e-22
Identity = 64/157 (40.76%), Postives = 89/157 (56.69%), Query Frame = 0
Query:   24 RLRRQVEEMETFLNDYGLKWVGTSSGXXXXXXXXXIDTDRDVLLP-WTEGAATVPQ-LDLDLLIARIHDLNTIILEERGGG---VVRSGRRARLSRPDTVALSIYADGLSLGGEGSCLRRYDAVDTQAFIRDVLDGFFPSELRRRYPDGFLTEVQDR 175
            +L+ Q+  ME FL DYGL WVG +            + +   L P W  G +TVP+ +D DLL++R+ DLN +     G G   V R+   ARL  PD + L++Y +G+ L  +G   R Y    TQ  ++D+LDGFFPSEL+ RYPDG   +V DR
Sbjct:  481 QLQSQISAMERFLGDYGLTWVGETLEEW--------EEEPLALGPLWKPGESTVPRDVDFDLLLSRLRDLNIVA----GAGQPRVERTASGARLKLPDPLPLTLYGNGIVLC-QGP-FRAYSEPSTQKCLQDILDGFFPSELQTRYPDGVPFQVSDR 623          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|158683 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YRC6_9STRA1.780e-114100.00SEP domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A7S2SMP3_9STRA6.900e-3240.38Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
UPI00052272096.580e-2437.66LOW QUALITY PROTEIN: UBX domain-containing protein... [more]
A0A099ZUU6_TINGU2.490e-2336.36UBX domain-containing protein 11 (Fragment) n=2 Ta... [more]
A0A8D0DJ55_9SAUR5.760e-2337.66UBX domain protein 11 n=2 Tax=Salvator merianae Ta... [more]
UPI001553551F2.420e-2237.01UBX domain-containing protein 11 isoform X1 n=2 Ta... [more]
A0A8C3ILU2_CHRPI2.850e-2237.66UBX domain protein 11 n=24 Tax=Durocryptodira TaxI... [more]
W5K3H7_ASTMX3.030e-2243.23UBX domain protein 11 n=1 Tax=Astyanax mexicanus T... [more]
A0A1U8CZ30_ALLSI3.980e-2236.36UBX domain-containing protein 11 n=5 Tax=Crocodyli... [more]
UPI0018F69A968.350e-2240.76UBX domain-containing protein 11 n=1 Tax=Tachyglos... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 15..38
NoneNo IPR availablePANTHERPTHR23333:SF4UBX DOMAIN-CONTAINING PROTEIN 11coord: 20..175
NoneNo IPR availablePANTHERPTHR23333UBX DOMAIN CONTAINING PROTEINcoord: 20..175
IPR012989SEP domainPFAMPF08059SEPcoord: 120..174
e-value: 2.7E-6
score: 27.9
IPR012989SEP domainPROSITEPS51399SEPcoord: 115..175
score: 18.128273
IPR036241NSFL1 cofactor p47, SEP domain superfamilyGENE3D3.30.420.210SEP domaincoord: 116..175
e-value: 1.4E-7
score: 33.6
IPR036241NSFL1 cofactor p47, SEP domain superfamilySUPERFAMILY102848NSFL1 (p97 ATPase) cofactor p47, SEP domaincoord: 110..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_6contigContig_6:1393128..1393652 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158683mRNA_2200Tribonema minus UTEX_B_3156 mRNAContig_6 1393128..1393652 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|158683|e_gw1.6.24.1 ID=Trimin1|158683|e_gw1.6.24.1|Name=jgi.p|Trimin1|158683|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=175bp
MRQLDAATGGNAAPLLAAERENQRLRRQVEEMETFLNDYGLKWVGTSSGG
GGDAPPPPIDTDRDVLLPWTEGAATVPQLDLDLLIARIHDLNTIILEERG
GGVVRSGRRARLSRPDTVALSIYADGLSLGGEGSCLRRYDAVDTQAFIRD
VLDGFFPSELRRRYPDGFLTEVQDR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012989SEP_domain
IPR036241NSFL1C_SEP_dom_sf