Trimin1|158619|e_gw1.6.106.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|158619
Unique NameTrimin1|158619|e_gw1.6.106.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length258
Homology
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BLAST of jgi.p|Trimin1|158619 vs. uniprot
Match: A0A835YS03_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS03_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.370e-32
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0 
Query:    1 MERHFPQTIDGQVELLDFLERHTSHALPSLPSTVGSWMALTSLNFSNCRHLTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQLDLSIMXXXXXXXXXXXXXXXXXXXXXLSCCHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEIFHEAGCTDKVKQHLASLKFTRN 257
            MERHFPQTIDGQVELLDFLERHTSHALPSLPSTVGSWMALTSLNFSNCRHLTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQLDLSIMXXXXXXXXXXXXXXXXXXXXXLSCCHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEIFHEAGCTDKVKQHLASLKFTRN
Sbjct:    1 MERHFPQTIDGQVELLDFLERHTSHALPSLPSTVGSWMALTSLNFSNCRHLTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQLDLSIMXXXXXXXXXXXXXXXXXXXXXLSCCHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEIFHEAGCTDKVKQHLASLKFTRN 257
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|158619 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YS03_9STRA1.370e-32100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 97..254
e-value: 2.3E-32
score: 113.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 21..96
e-value: 2.2E-8
score: 34.8
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 127..243
coord: 5..83
coord: 29..156
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 29..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_6contigContig_6:618359..619201 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158619mRNA_2102Tribonema minus UTEX_B_3156 mRNAContig_6 618359..619201 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|158619|e_gw1.6.106.1 ID=Trimin1|158619|e_gw1.6.106.1|Name=jgi.p|Trimin1|158619|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=258bp
MERHFPQTIDGQVELLDFLERHTSHALPSLPSTVGSWMALTSLNFSNCRH
LTCLPESVSGWISLKRLTMRNCHALTDLPASAGCWAALTQLDLSIMCSAL
TDLPESVGGWARLTELDLSCCHALPGLPKSVGGWVSLRELSLHECRALTS
LPDSVGGWAVLTKLNMSGCNALTGLPESVGSWELLAQLNLQGCSALVDVP
KSVGSWVALHELDLRDCCALKCLPDSICGWTSLEIFHEAGCTDKVKQHLA
SLKFTRN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf