Trimin1|158382|e_gw1.5.121.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|158382
Unique NameTrimin1|158382|e_gw1.5.121.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length198
Homology
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BLAST of jgi.p|Trimin1|158382 vs. uniprot
Match: A0A836CBN4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN4_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 3.320e-15
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0 
Query:    1 MKTVHHGIKDVCCLQEGCGKMFSAKGNMKVHYNS 34
            MKTVHHGIKDVCCLQEGCGKMFSAKGNMKVHYNS
Sbjct:    1 MKTVHHGIKDVCCLQEGCGKMFSAKGNMKVHYNS 34
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|158382 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CBN4_9STRA3.320e-15100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 73..98
e-value: 0.0033
score: 26.7
coord: 165..190
e-value: 0.022
score: 23.9
coord: 42..67
e-value: 0.015
score: 24.5
coord: 104..129
e-value: 0.0058
score: 25.8
coord: 11..36
e-value: 0.29
score: 20.2
coord: 135..159
e-value: 0.023
score: 23.8
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 136..159
e-value: 7.0E-4
score: 19.9
coord: 13..36
e-value: 0.0057
score: 17.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 106..129
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 167..190
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 137..159
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 13..36
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 44..67
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 75..98
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 42..72
score: 9.972048
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 165..195
score: 10.616323
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 104..134
score: 10.138311
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 11..41
score: 9.805782
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 73..103
score: 9.972048
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 135..164
score: 12.320538
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 162..190
e-value: 2.2E-6
score: 29.5
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 132..160
e-value: 1.7E-5
score: 26.8
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 40..71
e-value: 7.5E-6
score: 27.5
coord: 1..39
e-value: 1.2E-6
score: 30.1
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 72..131
e-value: 3.5E-8
score: 35.3
NoneNo IPR availablePANTHERPTHR46179ZINC FINGER PROTEINcoord: 5..198
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 35..80
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 3..49
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 144..198
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 83..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_5contigContig_5:1008473..1009066 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158382mRNA_2359Tribonema minus UTEX_B_3156 mRNAContig_5 1008473..1009066 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|158382|e_gw1.5.121.1 ID=Trimin1|158382|e_gw1.5.121.1|Name=jgi.p|Trimin1|158382|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=198bp
MKTVHHGIKDVCCLQEGCGKMFSAKGNMKVHYNSVHLGIKNISCPQEGCS
QTFTTTQNMDVHVKAVHLGIKDISCPQEGCSQTFTTQQSMTNHVNGVHLG
MRDVRCPQEGCGQMFFNKSAVQKHVNVVHLGIKDIPCSHGCGKVFSNTSN
MQAHVKGVHLGTKDIACSHEGCKKMFSAKADMQKHVKCVHLGVKDIDC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf