Trimin1|157658|e_gw1.3.361.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|157658
Unique NameTrimin1|157658|e_gw1.3.361.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length87
Homology
BLAST of jgi.p|Trimin1|157658 vs. uniprot
Match: A0A835Z0W3_9STRA (Histone H4 (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0W3_9STRA)

HSP 1 Score: 174 bits (441), Expect = 3.090e-55
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0
Query:    1 MPPDADADVLDTVQGVTKSAIRRLCRRGGVKRISGLMYEEVRGVVTLFLKDVLHDTVLYTENARRKTVSALDVVYALKRRGHHLYGF 87
            MPPDADADVLDTVQGVTKSAIRRLCRRGGVKRISGLMYEEVRGVVTLFLKDVLHDTVLYTENARRKTVSALDVVYALKRRGHHLYGF
Sbjct:    1 MPPDADADVLDTVQGVTKSAIRRLCRRGGVKRISGLMYEEVRGVVTLFLKDVLHDTVLYTENARRKTVSALDVVYALKRRGHHLYGF 87          
BLAST of jgi.p|Trimin1|157658 vs. uniprot
Match: A0A3B4ZU42_9TELE (Histone H4 n=2 Tax=Stegastes partitus TaxID=144197 RepID=A0A3B4ZU42_9TELE)

HSP 1 Score: 116 bits (291), Expect = 3.330e-32
Identity = 56/80 (70.00%), Postives = 70/80 (87.50%), Query Frame = 0
Query:    8 DVLDTVQGVTKSAIRRLCRRGGVKRISGLMYEEVRGVVTLFLKDVLHDTVLYTENARRKTVSALDVVYALKRRGHHLYGF 87
            DVL+ +QG+TK AIRRL RRGGVKRISGL+YEE RGV+ +FL++V+ D V YTE+A+RKTV+A+DVVYALKR+G  LYGF
Sbjct:   18 DVLNYIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 97          
BLAST of jgi.p|Trimin1|157658 vs. uniprot
Match: C5KFG5_PERM5 (Histone H4 n=25 Tax=Eukaryota TaxID=2759 RepID=C5KFG5_PERM5)

HSP 1 Score: 116 bits (291), Expect = 3.740e-32
Identity = 57/77 (74.03%), Postives = 67/77 (87.01%), Query Frame = 0
Query:   11 DTVQGVTKSAIRRLCRRGGVKRISGLMYEEVRGVVTLFLKDVLHDTVLYTENARRKTVSALDVVYALKRRGHHLYGF 87
            D +QG+TK AIRRL RRGGVKRISGL+YEE RGV+ +FL+ V+ DTV YTE+ARRKTV+ALDVVYALKR+G  LYGF
Sbjct:   25 DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLESVIKDTVTYTEHARRKTVTALDVVYALKRQGKTLYGF 101          
BLAST of jgi.p|Trimin1|157658 vs. uniprot
Match: H4_SOLLC (Histone H4 n=13 Tax=cellular organisms TaxID=131567 RepID=H4_SOLLC)

HSP 1 Score: 115 bits (289), Expect = 7.550e-32
Identity = 55/77 (71.43%), Postives = 68/77 (88.31%), Query Frame = 0
Query:   11 DTVQGVTKSAIRRLCRRGGVKRISGLMYEEVRGVVTLFLKDVLHDTVLYTENARRKTVSALDVVYALKRRGHHLYGF 87
            D +QG+TK AIRRL RRGGVKRISGL+YEE RGV+ +FL++V+ D+V YTE+ARRKTV+A+DVVYALKR+G  LYGF
Sbjct:   25 DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 101          
BLAST of jgi.p|Trimin1|157658 vs. uniprot
Match: M7BWI0_CHEMY (Histone H4 n=1 Tax=Chelonia mydas TaxID=8469 RepID=M7BWI0_CHEMY)

HSP 1 Score: 115 bits (289), Expect = 7.550e-32
Identity = 54/77 (70.13%), Postives = 67/77 (87.01%), Query Frame = 0
Query:   11 DTVQGVTKSAIRRLCRRGGVKRISGLMYEEVRGVVTLFLKDVLHDTVLYTENARRKTVSALDVVYALKRRGHHLYGF 87
            D +QG+TK AIRRL RRGGVKR+SGL+YEE RGV+ +FLK+V+HD V YTE+A+RKTV+A D+VYALKR+G  LYGF
Sbjct:   25 DNIQGITKPAIRRLARRGGVKRVSGLIYEETRGVLKVFLKNVIHDAVTYTEHAKRKTVTATDMVYALKRQGRTLYGF 101          
BLAST of jgi.p|Trimin1|157658 vs. uniprot
Match: A0A8C3RS76_CHESE (Histone H4 n=1 Tax=Chelydra serpentina TaxID=8475 RepID=A0A8C3RS76_CHESE)

HSP 1 Score: 115 bits (289), Expect = 7.550e-32
Identity = 55/77 (71.43%), Postives = 67/77 (87.01%), Query Frame = 0
Query:   11 DTVQGVTKSAIRRLCRRGGVKRISGLMYEEVRGVVTLFLKDVLHDTVLYTENARRKTVSALDVVYALKRRGHHLYGF 87
            D +QG+TK AIRRL RRGGVKRISGL+YEE RGV+ +FL+DV+ D V YTE+A+RKTV+A+DVVYALKR+G  LYGF
Sbjct:   25 DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEDVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 101          
BLAST of jgi.p|Trimin1|157658 vs. uniprot
Match: A0A0B2F0V8_9BACL (CENP-T_C domain-containing protein n=1 Tax=Paenibacillus sp. IHB B 3415 TaxID=867080 RepID=A0A0B2F0V8_9BACL)

HSP 1 Score: 115 bits (288), Expect = 8.000e-32
Identity = 55/77 (71.43%), Postives = 67/77 (87.01%), Query Frame = 0
Query:   11 DTVQGVTKSAIRRLCRRGGVKRISGLMYEEVRGVVTLFLKDVLHDTVLYTENARRKTVSALDVVYALKRRGHHLYGF 87
            D +QG+TK AIRRL RRGGVKRISGL+YEE RGV+ +FL++V+ D V YTE+ARRKTV+A+DVVYALKR+G  LYGF
Sbjct:   15 DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 91          
BLAST of jgi.p|Trimin1|157658 vs. uniprot
Match: A0A4D9CLB0_9STRA (Histone H4 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLB0_9STRA)

HSP 1 Score: 116 bits (290), Expect = 8.500e-32
Identity = 56/77 (72.73%), Postives = 68/77 (88.31%), Query Frame = 0
Query:   11 DTVQGVTKSAIRRLCRRGGVKRISGLMYEEVRGVVTLFLKDVLHDTVLYTENARRKTVSALDVVYALKRRGHHLYGF 87
            D +QG+TK AIRRL RRGGVKRISGL+YEE RGV+ +FL++V+ D+V YTE+ARRKTV+ALDVVYALKR+G  LYGF
Sbjct:   41 DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTALDVVYALKRQGRTLYGF 117          
BLAST of jgi.p|Trimin1|157658 vs. uniprot
Match: R7W1L4_AEGTA (Histone H4 n=2 Tax=Eukaryota TaxID=2759 RepID=R7W1L4_AEGTA)

HSP 1 Score: 115 bits (288), Expect = 8.730e-32
Identity = 55/77 (71.43%), Postives = 67/77 (87.01%), Query Frame = 0
Query:   11 DTVQGVTKSAIRRLCRRGGVKRISGLMYEEVRGVVTLFLKDVLHDTVLYTENARRKTVSALDVVYALKRRGHHLYGF 87
            D +QG+TK AIRRL RRGGVKRISGL+YEE RGV+ +FL++V+ D V YTE+ARRKTV+A+DVVYALKR+G  LYGF
Sbjct:   18 DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 94          
BLAST of jgi.p|Trimin1|157658 vs. uniprot
Match: A0A175YNJ0_DAUCS (Histone H4 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A175YNJ0_DAUCS)

HSP 1 Score: 115 bits (288), Expect = 9.820e-32
Identity = 55/77 (71.43%), Postives = 67/77 (87.01%), Query Frame = 0
Query:   11 DTVQGVTKSAIRRLCRRGGVKRISGLMYEEVRGVVTLFLKDVLHDTVLYTENARRKTVSALDVVYALKRRGHHLYGF 87
            D +QG+TK AIRRL RRGGVKRISGL+YEE RGV+ +FL++V+ D V YTE+ARRKTV+A+DVVYALKR+G  LYGF
Sbjct:   22 DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 98          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157658 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z0W3_9STRA3.090e-55100.00Histone H4 (Fragment) n=2 Tax=Tribonema minus TaxI... [more]
A0A3B4ZU42_9TELE3.330e-3270.00Histone H4 n=2 Tax=Stegastes partitus TaxID=144197... [more]
C5KFG5_PERM53.740e-3274.03Histone H4 n=25 Tax=Eukaryota TaxID=2759 RepID=C5K... [more]
H4_SOLLC7.550e-3271.43Histone H4 n=13 Tax=cellular organisms TaxID=13156... [more]
M7BWI0_CHEMY7.550e-3270.13Histone H4 n=1 Tax=Chelonia mydas TaxID=8469 RepID... [more]
A0A8C3RS76_CHESE7.550e-3271.43Histone H4 n=1 Tax=Chelydra serpentina TaxID=8475 ... [more]
A0A0B2F0V8_9BACL8.000e-3271.43CENP-T_C domain-containing protein n=1 Tax=Paeniba... [more]
A0A4D9CLB0_9STRA8.500e-3272.73Histone H4 n=1 Tax=Nannochloropsis salina CCMP1776... [more]
R7W1L4_AEGTA8.730e-3271.43Histone H4 n=2 Tax=Eukaryota TaxID=2759 RepID=R7W1... [more]
A0A175YNJ0_DAUCS9.820e-3271.43Histone H4 n=1 Tax=Daucus carota subsp. sativus Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001951Histone H4PRINTSPR00623HISTONEH4coord: 75..86
score: 73.53
coord: 63..75
score: 78.28
coord: 6..25
score: 49.12
coord: 26..46
score: 76.19
coord: 48..62
score: 51.96
IPR001951Histone H4SMARTSM00417h44coord: 18..76
e-value: 4.5E-15
score: 66.1
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 7..87
e-value: 3.9E-33
score: 115.6
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 12..86
NoneNo IPR availablePANTHERPTHR10484:SF185HISTONE H4coord: 11..87
NoneNo IPR availablePANTHERPTHR10484HISTONE H4coord: 11..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_3contigContig_3:679492..679752 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157658mRNA_192Tribonema minus UTEX_B_3156 mRNAContig_3 679492..679752 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|157658|e_gw1.3.361.1 ID=Trimin1|157658|e_gw1.3.361.1|Name=jgi.p|Trimin1|157658|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=87bp
MPPDADADVLDTVQGVTKSAIRRLCRRGGVKRISGLMYEEVRGVVTLFLK
DVLHDTVLYTENARRKTVSALDVVYALKRRGHHLYGF
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001951Histone_H4
IPR009072Histone-fold