Trimin1|157547|e_gw1.3.462.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|157547
Unique NameTrimin1|157547|e_gw1.3.462.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length333
Homology
BLAST of jgi.p|Trimin1|157547 vs. uniprot
Match: A0A835YX88_9STRA (Proliferating cell nuclear antigen n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX88_9STRA)

HSP 1 Score: 589 bits (1519), Expect = 1.640e-211
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0
Query:    1 MVSGASSAPAPALSVPPEASSVAXXXXXXXXXXXXXXXXXXXXAPAGEDAAAAVACPTDEAVPEGILVCMRTHHTQQWRTLTDALKDLISESPVTFGPAGMKLVSMDPAHVALVNLQIQSEHYYCKREITVGLNVAALYKMLRNLTTGGYILELSLSEDDPDHLRVLISNEDKRTRTSNRPKLLRLPDEIITIPPAVFQRVLSIPSADFQRYIRELSGVSNKIKIRSTRDVLVLSAEGTSGSTEIEIRPTASGMHWQFIDSEATDEVVEGVFYSRYVERFARPLDSVVEIFIKQAYPLVLRYQLQAATVRLVIAQCTDDDAGGEGGSAKAAK 332
            MVSGASSAPAPALSVPPEASSVAXXXXXXXXXXXXXXXXXXXXAPAGEDAAAAVACPTDEAVPEGILVCMRTHHTQQWRTLTDALKDLISESPVTFGPAGMKLVSMDPAHVALVNLQIQSEHYYCKREITVGLNVAALYKMLRNLTTGGYILELSLSEDDPDHLRVLISNEDKRTRTSNRPKLLRLPDEIITIPPAVFQRVLSIPSADFQRYIRELSGVSNKIKIRSTRDVLVLSAEGTSGSTEIEIRPTASGMHWQFIDSEATDEVVEGVFYSRYVERFARPLDSVVEIFIKQAYPLVLRYQLQAATVRLVIAQCTDDDAGGEGGSAKAAK
Sbjct:    1 MVSGASSAPAPALSVPPEASSVAXXXXXXXXXXXXXXXXXXXXAPAGEDAAAAVACPTDEAVPEGILVCMRTHHTQQWRTLTDALKDLISESPVTFGPAGMKLVSMDPAHVALVNLQIQSEHYYCKREITVGLNVAALYKMLRNLTTGGYILELSLSEDDPDHLRVLISNEDKRTRTSNRPKLLRLPDEIITIPPAVFQRVLSIPSADFQRYIRELSGVSNKIKIRSTRDVLVLSAEGTSGSTEIEIRPTASGMHWQFIDSEATDEVVEGVFYSRYVERFARPLDSVVEIFIKQAYPLVLRYQLQAATVRLVIAQCTDDDAGGEGGSAKAAK 332          
BLAST of jgi.p|Trimin1|157547 vs. uniprot
Match: A0A835Z117_9STRA (Proliferating cell nuclear antigen n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z117_9STRA)

HSP 1 Score: 420 bits (1079), Expect = 7.040e-145
Identity = 210/284 (73.94%), Postives = 245/284 (86.27%), Query Frame = 0
Query:   44 APAGEDAAAAVACPTDEAVPEGILVCMRTHHTQQWRTLTDALKDLISESPVTFGPAGMKLVSMDPAHVALVNLQIQSEHYYCKREITVGLNVAALYKMLRNLTTGGYILELSLSEDDPDHLRVLISNEDKRTRTSNRPKLLRLPDEIITIPPAVFQRVLSIPSADFQRYIRELSGVSNKIKIRSTRDVLVLSAEGTSGSTEIEIRPTASGMHWQFIDSEATDE---VVEGVFYSRYVERFARPLDSVVEIFIKQAYPLVLRYQLQAATVRLVIAQCTDDDAGGE 324
            A A E  A A+A P++  VPEG +VCMRTHHTQQWRTL DALKDLI ESPVTFG +GMKL+SMDPAHVAL+NLQ+ SE YYCKRE TVGLNVAALY+MLRNLTTGGY+LE++L E DPDHL +L++NE+KRTRTSNR KLLRLP+EIITIPP VFQRVLSIPSADFQRYIRELSGVSNKI IRST+D+L+LSA GT G+TEIE+RPTASGMHWQ I+S A+DE    VEGV+ ++Y+ERF+RPLD VVEIF++ AYPLVLRY +  A VRLVIAQC  ++ GG+
Sbjct:   26 AAAEEPNADALALPSEPEVPEGTVVCMRTHHTQQWRTLIDALKDLIPESPVTFGASGMKLISMDPAHVALINLQVCSEFYYCKRETTVGLNVAALYRMLRNLTTGGYLLEINLLESDPDHLSILVNNEEKRTRTSNRLKLLRLPEEIITIPPTVFQRVLSIPSADFQRYIRELSGVSNKISIRSTKDMLLLSASGTMGTTEIEVRPTASGMHWQHIESAASDEEEEAVEGVYLAKYLERFSRPLDPVVEIFMRPAYPLVLRYSMSTAVVRLVIAQCAREEGGGD 309          
BLAST of jgi.p|Trimin1|157547 vs. uniprot
Match: A0A836CPH7_9STRA (PCNA_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPH7_9STRA)

HSP 1 Score: 326 bits (836), Expect = 1.910e-106
Identity = 174/289 (60.21%), Postives = 208/289 (71.97%), Query Frame = 0
Query:   59 DEAVPEGILVCMRTHHTQQWRTLTDALKDLISESPVTFGPAGMKLVSMDPAHVALVNLQIQSEHYYCKREITVGLNVAALYKMLRNLTTGGYILELSLSEDDPDHLRVLISNEDKRTRTSNRPKLLRLPDEIITIPPAVFQRVLSIPSADFQRYIRELSGVSNKIKIRSTRDVLVLSAEGTSGSTEIEIRPTASGMHWQFID----------------------------SEATDEVVEGVFYSRYVERFARPLDSVVEIFIKQAYPLVLRYQLQAATVRLVIAQCTDD 319
            DE VP G LV +RT H+QQWRTL DALKDL+ E PVTFG  G+KLVSMDP  +AL+          C   + VGLNVAALY+MLRNLTTGGYILELS+ E  PD + V++SN +KR RT +  KLLRLP+EIITIPPAVFQRVLSIPSADFQRY+RELSGVSN+I++RS+RD L LSA G +G TEIEIRPTASGMHWQFI+                            +   D  ++GVF S+Y+ERF+RPLDS+VEIF+K+ YPLVLRY +Q   VRLV+AQC D+
Sbjct:  118 DEDVPLGTLVLLRTSHSQQWRTLADALKDLVPECPVTFGADGLKLVSMDPGMIALI----------CW--LMVGLNVAALYRMLRNLTTGGYILELSIHESTPDRMSVVVSNGEKRVRTCHSLKLLRLPEEIITIPPAVFQRVLSIPSADFQRYVRELSGVSNRIRVRSSRDRLTLSATGVAGLTEIEIRPTASGMHWQFIEPXXXXXXXXXADDAPEXXXXXXXGASPPAAVEDPGIDGVFLSKYLERFSRPLDSIVEIFLKRDYPLVLRYTMQTTVVRLVVAQCEDE 394          
BLAST of jgi.p|Trimin1|157547 vs. uniprot
Match: A0A836CHQ2_9STRA (Proliferating cell nuclear antigen n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ2_9STRA)

HSP 1 Score: 319 bits (818), Expect = 1.960e-105
Identity = 165/267 (61.80%), Postives = 204/267 (76.40%), Query Frame = 0
Query:   59 DEAVPEGILVCMRTHHTQQWRTLTDALKDLISESPVTFGPAGMKLVSMDPAHVALVNLQIQSEHYYCKREITVGLNVAALYKMLRNLTTGGYILELSLSEDDPDHLRVLISNEDKRTRTSNRPKLLRLPDEIITIPPAVFQRVLSIPSADFQRYIRELSGVSNKIKIRSTRDVLVLSAEGTSGSTEIEIRPTASGMHWQFIDSEATDE-----VVEGVFYSRYVERFARPLDSVVEIFIKQAYPLVLRYQLQAATVRLVIAQCTDDD 320
            D+  P+ IL CMR+  T QWR L D LKDLI+E P++F   GMKL+S+DP  VAL++LQ +SE YYCK EITVG+N+ ALYKMLRNLTTGGY+LE S+S  + D L + + N DKRT TSN+ KLL+LP E + IP   FQRVLSIPSAD QR++REL+ +SNKIKI+ST D L+LSAEGT GS+EI IRPTASGMHW  ID+    E     VVEGV++S+++ERF+RPLD + EIF+KQ YPLVLRY L  ATVRLVIA   +D+
Sbjct:   29 DDLDPDCIL-CMRSSQTSQWRLLVDFLKDLITECPISFSQDGMKLISLDPIKVALLHLQAKSEFYYCKSEITVGMNITALYKMLRNLTTGGYMLEFSMSSKEMDVLSIQLINSDKRTCTSNKLKLLKLPQETLIIPSTNFQRVLSIPSADLQRHVRELAALSNKIKIKSTADQLILSAEGTMGSSEIVIRPTASGMHWISIDNNQESEGGGDAVVEGVYFSKFLERFSRPLDPICEIFVKQNYPLVLRYVLSTATVRLVIAPVQEDE 294          
BLAST of jgi.p|Trimin1|157547 vs. uniprot
Match: A0A835Z7L8_9STRA (Proliferating cell nuclear antigen n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7L8_9STRA)

HSP 1 Score: 308 bits (788), Expect = 7.350e-101
Identity = 156/249 (62.65%), Postives = 193/249 (77.51%), Query Frame = 0
Query:   77 QWRTLTDALKDLISESPVTFGPAGMKLVSMDPAHVALVNLQIQSEHYYCKREITVGLNVAALYKMLRNLTTGGYILELSLSEDDPDHLRVLISNEDKRTRTSNRPKLLRLPDEIITIPPAVFQRVLSIPSADFQRYIRELSGVSNKIKIRSTRDVLVLSAEGTSGSTEIEIRPTASGMHWQFIDSEATDE-----VVEGVFYSRYVERFARPLDSVVEIFIKQAYPLVLRYQLQAATVRLVIAQCTDDD 320
            QWR L D LKDLI+E P++F   GMKL+S+DP  VAL++LQ +SE YYCK EIT+G+N+ ALYKMLRNLTTGGY+LE S+S  + D L + + N DKRT TSN+ KLL+LP E + IP   FQRVLSIPSAD QR++REL+ +SNKIKI+ST D L+LSAEGT GS+EI IRPTASGMHW  ID+    E     VVEGV++S+++ERF+RPLD + EIF+KQ YPLVLRY L  ATVRLVIA   +D+
Sbjct:   48 QWRLLVDFLKDLITECPISFNQDGMKLISLDPIKVALLHLQAKSEFYYCKSEITIGMNITALYKMLRNLTTGGYMLEFSMSSKEMDVLSIQLINSDKRTCTSNKLKLLKLPQETLIIPSTNFQRVLSIPSADLQRHVRELAALSNKIKIKSTADQLILSAEGTMGSSEIVIRPTASGMHWISIDNNQESEGGGDAVVEGVYFSKFLERFSRPLDPICEIFVKQNYPLVLRYVLSTATVRLVIAPVQEDE 296          
BLAST of jgi.p|Trimin1|157547 vs. uniprot
Match: A0A835Z2Q5_9STRA (Proliferating cell nuclear antigen n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Q5_9STRA)

HSP 1 Score: 285 bits (729), Expect = 3.340e-92
Identity = 135/259 (52.12%), Postives = 190/259 (73.36%), Query Frame = 0
Query:   62 VPEGILVCMRTHHTQQWRTLTDALKDLISESPVTFGPAGMKLVSMDPAHVALVNLQIQSEHYYCKREITVGLNVAALYKMLRNLTTGGYILELSLSEDDPDHLRVLISNEDKRTRTSNRPKLLRLPDEIITIPPAVFQRVLSIPSADFQRYIRELSGVSNKIKIRSTRDVLVLSAEGTSGSTEIEIRPTASGMHWQFIDSEATDEVVEGVFYSRYVERFARPLDSVVEIFIKQAYPLVLRYQLQAATVRLVIAQCTDDD 320
            +P   ++ MR+  T QWR++ D +KD+ +E P  F   G+ ++++DP  +AL++++  +E YYCK  + VG+NV  LY++LRNLT+ GY+LE+S+ +++ D + V I+N DKR+   N+ KLLRLPDE+ITIP   F RVLSIPS+D QRYIRELS +S+KI + STRD L LSA+G  GS+EI +RPT+SG+H+ F D+E  DEVV   FYSRY+E+  RP+DS  E+F+K+ YPLVLRY L  AT+R+VIA   DDD
Sbjct:   21 LPADCILMMRSTQTSQWRSIFDFVKDVTTEVPFKFDTEGLSIITLDPLKIALISVRAVTEFYYCKAPLNVGINVTVLYRLLRNLTSAGYVLEISMFQNETDVIHVQITNRDKRSVVRNKIKLLRLPDEVITIPSTTFDRVLSIPSSDLQRYIRELSSLSSKITVSSTRDELTLSAQGALGSSEITVRPTSSGVHFLFKDTEKHDEVVSARFYSRYLEKLCRPIDSSTEVFLKKGYPLVLRYNLATATIRVVIAPVNDDD 279          
BLAST of jgi.p|Trimin1|157547 vs. uniprot
Match: B5LWG9_9PHYC (Putative PCNA n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWG9_9PHYC)

HSP 1 Score: 188 bits (478), Expect = 2.360e-54
Identity = 104/256 (40.62%), Postives = 169/256 (66.02%), Query Frame = 0
Query:   66 ILVCMRTHHTQQWRTLTDALKDLISESPVTF-GPAGMKLVSMDPAHVALVNLQIQS-EHYYCKREITVGLNVAALYKMLRNLTTGGYILELSLSEDDPDHLRVLISNEDKRTRTSNRPKLLRLPDEIITIPPAVFQRVLSIPSADFQRYIRELSGVSNKIKIRSTRDVLVLSAEGTSGSTEIEIRPTASGMHWQFIDSEATDEVVEGVFYSRYVERFARP-LDSVVEIFIKQAYPLVLRYQLQAATVRLVIAQCTD 318
            ++  MRT    Q+++L + LK+L+++  + F    G++LVS+DP  VA+V+L + S E++Y K  +T G+N+A LY+M+R+L++G Y +E  + ED+P  + + + N D+RTRT +  KLL L +  I+IP   + RV+S+PS++  +++RE+  VSN + +R TR  L   AEG   S+ I I PTASG++W+F  SE   ++ EG F  RY+E+F R  +++ VE+F+K  +PL+LRY+L   T+R VIA   D
Sbjct:   35 LIFLMRTSQCAQFKSLCECLKELLTDVNMEFIENKGIRLVSIDPGRVAMVHLVVNSVEYFYVKGTVTAGMNMAFLYRMIRSLSSGDY-MEWRIYEDNPHAMNIELYNSDRRTRTVSSMKLLDLDEVEISIPNVEYDRVVSMPSSELSKHVREMVAVSNFVTVRGTRSTLEFIAEGEMASSHITIHPTASGLNWKF--SEDVGDI-EGKFVVRYLEKFGRVGVEANVELFLKTDFPLILRYELSIGTLRFVIAPVKD 286          
BLAST of jgi.p|Trimin1|157547 vs. uniprot
Match: Q6XM81_9PHYC (FirrV-1-A6 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM81_9PHYC)

HSP 1 Score: 184 bits (466), Expect = 8.710e-53
Identity = 99/256 (38.67%), Postives = 167/256 (65.23%), Query Frame = 0
Query:   66 ILVCMRTHHTQQWRTLTDALKDLISESPVTF-GPAGMKLVSMDPAHVALVNLQIQS-EHYYCKREITVGLNVAALYKMLRNLTTGGYILELSLSEDDPDHLRVLISNEDKRTRTSNRPKLLRLPDEIITIPPAVFQRVLSIPSADFQRYIRELSGVSNKIKIRSTRDVLVLSAEGTSGSTEIEIRPTASGMHWQFIDSEATDEVVEGVFYSRYVERFARP-LDSVVEIFIKQAYPLVLRYQLQAATVRLVIAQCTD 318
            ++  +RT  + Q++ L + LK+L+++  + F    G++LVS+DP  VA+V+L I S E++Y +  +T GLN++ LY+M+R LT+G   +E  + EDDP  + + + N D+RTRT +  KLL L +  I+IP   + R++S+PS++  +++RE+  VSN + +R+T+  L   AEG   ++ I I PTASG++W++ D       +EG F  RY+E+F R  +++ VE+F+K+ +PL+LRY+L   T+R VIA   D
Sbjct:   15 LIALLRTSQSTQFKNLCECLKELLTDVNLEFIQDKGIRLVSIDPGRVAMVHLVINSVEYFYAQGTVTAGLNMSFLYRMIRCLTSGDS-MEWRVFEDDPHTMHIELYNNDRRTRTVSSIKLLDLDEVDISIPEVEYDRIVSMPSSELSKHVREMIAVSNYVTVRTTKTTLQFIAEGDMATSHITIHPTASGLNWKYSDDVVG--TIEGKFVVRYLEKFGRVGVEANVELFLKKNFPLILRYELTIGTLRFVIAPVKD 267          
BLAST of jgi.p|Trimin1|157547 vs. uniprot
Match: D8LPF8_ECTSI (Proliferating cell nuclear antigen n=2 Tax=root TaxID=1 RepID=D8LPF8_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 2.410e-49
Identity = 98/267 (36.70%), Postives = 168/267 (62.92%), Query Frame = 0
Query:   57 PTDEAVPEG--ILVCMRTHHTQQWRTLTDALKDLISESPVTFGPA-GMKLVSMDPAHVALVNLQIQS-EHYYCKREITVGLNVAALYKMLRNLTTGGYILELSLSEDDPDHLRVLISNEDKRTRTSNRPKLLRLPDEIITIPPAVFQRVLSIPSADFQRYIRELSGVSNKIKIRSTRDVLVLSAEGTSGSTEIEIRPTASGMHWQFIDSEATDEVVEGVFYSRYVERFARPLDSV-VEIFIKQAYPLVLRYQLQAATVRLVIAQCTD 318
            PT++   +G  +++ M+T    Q+++L + LK+L+ E  + F    G++LVS+DP  VA+++L + + E +Y K  +T GLNV  LYKM+R++T+  + +E  + ED+P  + + +SN ++RT+T    KLL L  E I IP   F RV+S+PS++  +++RE+  VS  I IR+T+  L L +EG    + I I PTASG++W+  +     E +EG +++RY+E+F +   ++ VE+F+K  YPL+LR+++    +R  IA   D
Sbjct:   16 PTEQPSYKGRPLVLMMQTSQCLQFKSLIECLKELLCEVNMDFIEGKGIRLVSIDPGRVAMIHLVVNNIESFYAKGTVTAGLNVVVLYKMIRSMTSNDF-MEWRIYEDEPHRMEIELSNSERRTKTVTSIKLLDLDAEDIIIPQVEFDRVVSMPSSELSKHVREMVTVSPFISIRATQTTLELVSEGEMAKSHITIEPTASGLNWKHSEK---GEDIEGKYFARYIEKFTKNSLAINVELFLKANYPLILRFEISIGCLRFCIAPIQD 278          
BLAST of jgi.p|Trimin1|157547 vs. uniprot
Match: A0A6C0F6B6_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F6B6_9ZZZZ)

HSP 1 Score: 152 bits (384), Expect = 1.210e-40
Identity = 78/243 (32.10%), Postives = 154/243 (63.37%), Query Frame = 0
Query:   67 LVCMRTHHTQQWRTLTDALKDLISESPVTFGPAGMKLVSMDPAHVALVNLQIQS---EHYYCKREITVGLNVAALYKMLRNLTTGGYILELSLSEDDPDHLRVLISNEDKRTRTSNRPKLLRLPDEIITIPPAVFQRVLSIPSADFQRYIRELSGVSNKIKIRSTRDVLVLSAEGTSGSTEIEIRPTASGMHWQFIDSEATDEVVEGVFYSRYVERFAR--PLDSVVEIFIKQAYPLVLRYQL 304
            L+ ++T  +  +R L +ALK++++++ + F P G+K+++ D +   L+++++++   EHYYC  +  +GLN+  LYK+++ +     IL +++ +  P+ + + I+N +K+++T  R  LL LP   I+IPPA F+  L++PS+DFQ+ IR+++ + +KI+I+S+ + L+LS EG     E  +  T +G+   F      +E ++GVF  +Y+  F +   L +++ ++IK  YPLV+RY +
Sbjct:    7 LLVVKTVQSGAFRVLVEALKEILTDTNLIFEPTGIKMMATDNSDTVLIHMKLEADKFEHYYCPEKTVIGLNMNNLYKLIKTMGNND-ILTMAIPKMSPNRISIKINNMEKQSQTIFRLNLLDLPHPEISIPPAKFETELTLPSSDFQKLIRDMTNIGDKIEIKSSGENLILSCEGDFAEQETVLSETQNGL--SFSVKSKPEEPIQGVFSLKYLSLFTKCTNLCNLIHLYIKNDYPLVIRYDV 246          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157547 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YX88_9STRA1.640e-211100.00Proliferating cell nuclear antigen n=1 Tax=Tribone... [more]
A0A835Z117_9STRA7.040e-14573.94Proliferating cell nuclear antigen n=3 Tax=Tribone... [more]
A0A836CPH7_9STRA1.910e-10660.21PCNA_C domain-containing protein n=1 Tax=Tribonema... [more]
A0A836CHQ2_9STRA1.960e-10561.80Proliferating cell nuclear antigen n=1 Tax=Tribone... [more]
A0A835Z7L8_9STRA7.350e-10162.65Proliferating cell nuclear antigen n=2 Tax=Tribone... [more]
A0A835Z2Q5_9STRA3.340e-9252.12Proliferating cell nuclear antigen n=1 Tax=Tribone... [more]
B5LWG9_9PHYC2.360e-5440.63Putative PCNA n=1 Tax=Feldmannia species virus Tax... [more]
Q6XM81_9PHYC8.710e-5338.67FirrV-1-A6 n=1 Tax=Feldmannia irregularis virus a ... [more]
D8LPF8_ECTSI2.410e-4936.70Proliferating cell nuclear antigen n=2 Tax=root Ta... [more]
A0A6C0F6B6_9ZZZZ1.210e-4032.10Uncharacterized protein n=1 Tax=viral metagenome T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000730Proliferating cell nuclear antigen, PCNAPRINTSPR00339PCNACYCLINcoord: 100..118
score: 49.87
coord: 268..282
score: 31.11
coord: 76..95
score: 21.9
IPR000730Proliferating cell nuclear antigen, PCNATIGRFAMTIGR00590TIGR00590coord: 78..319
e-value: 4.0E-35
score: 119.5
IPR000730Proliferating cell nuclear antigen, PCNAPANTHERPTHR11352:SF0PROLIFERATING CELL NUCLEAR ANTIGENcoord: 74..319
IPR022648Proliferating cell nuclear antigen, PCNA, N-terminalPFAMPF00705PCNA_Ncoord: 79..178
e-value: 3.3E-15
score: 55.9
IPR022649Proliferating cell nuclear antigen, PCNA, C-terminalPFAMPF02747PCNA_Ccoord: 193..310
e-value: 4.5E-13
score: 49.5
NoneNo IPR availableGENE3D3.70.10.10coord: 67..322
e-value: 6.0E-44
score: 152.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..40
NoneNo IPR availablePANTHERPTHR11352PROLIFERATING CELL NUCLEAR ANTIGENcoord: 74..319
NoneNo IPR availableCDDcd00577PCNAcoord: 78..302
e-value: 1.83271E-33
score: 121.967
NoneNo IPR availableSUPERFAMILY55979DNA clampcoord: 193..319
NoneNo IPR availableSUPERFAMILY55979DNA clampcoord: 74..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_3contigContig_3:889463..890461 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157547mRNA_297Tribonema minus UTEX_B_3156 mRNAContig_3 889463..890461 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|157547|e_gw1.3.462.1 ID=Trimin1|157547|e_gw1.3.462.1|Name=jgi.p|Trimin1|157547|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=333bp
MVSGASSAPAPALSVPPEASSVAAPAPPANPAPRAEVVDPPAPAPAGEDA
AAAVACPTDEAVPEGILVCMRTHHTQQWRTLTDALKDLISESPVTFGPAG
MKLVSMDPAHVALVNLQIQSEHYYCKREITVGLNVAALYKMLRNLTTGGY
ILELSLSEDDPDHLRVLISNEDKRTRTSNRPKLLRLPDEIITIPPAVFQR
VLSIPSADFQRYIRELSGVSNKIKIRSTRDVLVLSAEGTSGSTEIEIRPT
ASGMHWQFIDSEATDEVVEGVFYSRYVERFARPLDSVVEIFIKQAYPLVL
RYQLQAATVRLVIAQCTDDDAGGEGGSAKAAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000730Pr_cel_nuc_antig
IPR022648Pr_cel_nuc_antig_N
IPR022649Pr_cel_nuc_antig_C