Trimin1|157498|e_gw1.3.285.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|157498
Unique NameTrimin1|157498|e_gw1.3.285.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length180
Homology
BLAST of jgi.p|Trimin1|157498 vs. uniprot
Match: A0A835YYU6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYU6_9STRA)

HSP 1 Score: 362 bits (929), Expect = 1.120e-126
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
Query:    1 MLSQVRLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAAQVCTASKCNCRSSTCLAYSLPTSTLLPVRFMVLKFGLSAS 179
            MLSQVRLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAAQVCTASKCNCRSSTCLAYSLPTSTLLPVRFMVLKFGLSAS
Sbjct:    1 MLSQVRLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAAQVCTASKCNCRSSTCLAYSLPTSTLLPVRFMVLKFGLSAS 179          
BLAST of jgi.p|Trimin1|157498 vs. uniprot
Match: A0A3Q2KRL5_HORSE (RAB1A, member RAS oncogene family n=1 Tax=Equus caballus TaxID=9796 RepID=A0A3Q2KRL5_HORSE)

HSP 1 Score: 126 bits (316), Expect = 7.550e-33
Identity = 68/170 (40.00%), Postives = 98/170 (57.65%), Query Frame = 0
Query:    6 RLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAAQVCTA--SKCNCRSSTCLAYSLPTSTLLPVRFMVLK 173
            +L+++GD GVGK+ ++ R+       D      Y ST+GVDF  +T+ L+GK ++LQ+WDT+G  R+ ++ S Y   A G+ +VYD T  ESF  V+  WL  +  YA E V  LLVGNKCDLT+ K VD   A+VC    ++   +  TC+ Y    S +   R  V K
Sbjct:   37 KLLLIGDSGVGKSCLLLRFA------DDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKVCLKFDAQTELKVLTCIMYGYGVSKICAPRIWVFK 199          
BLAST of jgi.p|Trimin1|157498 vs. uniprot
Match: A0A834Y4U7_9HYME (Uncharacterized protein n=1 Tax=Aphidius gifuensis TaxID=684658 RepID=A0A834Y4U7_9HYME)

HSP 1 Score: 125 bits (314), Expect = 1.020e-32
Identity = 59/135 (43.70%), Postives = 88/135 (65.19%), Query Frame = 0
Query:    6 RLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAAQ 140
            ++V++GDCG GKT +++R+ +G F         + +T+GVDF  KTV ++GKRV+LQ+WDT+G  R+  +   Y  +A+G+ LVYD T   SF  VQ  W+  V+ Y   +V  +LVGNKCDL SL+EV+   A+
Sbjct:   22 KIVLIGDCGTGKTCVVQRFRSGTFI------ERHGNTIGVDFSMKTVMIDGKRVKLQIWDTAGQERFSGITQSYYRSANGIILVYDITKKSSFLSVQK-WVEEVRRYTSSSVMLILVGNKCDLESLREVETSEAE 149          
BLAST of jgi.p|Trimin1|157498 vs. uniprot
Match: A0A3B4BDA3_9GOBI (Uncharacterized protein n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4BDA3_9GOBI)

HSP 1 Score: 122 bits (307), Expect = 2.480e-32
Identity = 61/137 (44.53%), Postives = 86/137 (62.77%), Query Frame = 0
Query:    6 RLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAAQVC 142
            +L+++GD GVGK+ ++ R+       D      Y ST+GVDF  +T+ L+GK ++LQ+WDT+G  R+ ++ S Y   A G+ +VYD T  ESF  V+  WL  +  YA E V  LLVGNKCDLT+ K VD   A+VC
Sbjct:   23 KLLLIGDSGVGKSCLLLRFA------DDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKVC 152          
BLAST of jgi.p|Trimin1|157498 vs. uniprot
Match: A0A8J2RY20_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2RY20_9CRUS)

HSP 1 Score: 124 bits (310), Expect = 3.860e-32
Identity = 56/134 (41.79%), Postives = 92/134 (68.66%), Query Frame = 0
Query:    6 RLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAA 139
            ++V++GDCG+GKT++++R+ +G F         Y++T+GVDF  KTV +EGK+V+LQ+WDT+G  R+ ++   Y  +A+GV LVYD T   SF  +Q  W+  ++ +    + ++L+GNKCD+ SL+EV+ V A
Sbjct:   19 KIVVIGDCGIGKTSLVQRFKSGVFT------ERYTNTIGVDFAMKTVVIEGKQVKLQIWDTAGQERFRTITQSYYRSANGVLLVYDITKRSSFLSLQK-WMEEIRRFTANNISWVLIGNKCDMDSLREVEQVEA 145          
BLAST of jgi.p|Trimin1|157498 vs. uniprot
Match: A0A1S3SXZ3_SALSA (ras-related protein ORAB-1-like n=1 Tax=Salmo salar TaxID=8030 RepID=A0A1S3SXZ3_SALSA)

HSP 1 Score: 122 bits (305), Expect = 3.950e-32
Identity = 62/147 (42.18%), Postives = 89/147 (60.54%), Query Frame = 0
Query:    6 RLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAAQVCTASKCNCRSS 152
            +L+++GD GVGK+ ++ R+       D      Y ST+GVDF  +T+ ++GK V+LQ+WDT+G  R+ ++ S Y   A G+ +VYD T  ESF  V+  WL  +  YA E V  LLVGNKCDL S K VD+   Q+C +    C +S
Sbjct:   10 KLLLIGDSGVGKSCLLLRFA------DDTYTESYISTIGVDFKIRTIEMDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLEEIDRYACENVSKLLVGNKCDLVSKKVVDSATGQLCNSYAVACSNS 149          
BLAST of jgi.p|Trimin1|157498 vs. uniprot
Match: A0A482WIF0_LAOST (Uncharacterized protein n=2 Tax=Delphacidae TaxID=33362 RepID=A0A482WIF0_LAOST)

HSP 1 Score: 123 bits (309), Expect = 5.880e-32
Identity = 59/135 (43.70%), Postives = 90/135 (66.67%), Query Frame = 0
Query:    6 RLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAAQ 140
            ++V++GDCGVGKT +++R+ +G F         + +TLGVDF  KTV ++GK+V+LQ+WDT+G  R+ ++   Y  +A+GV +VYD T   SF  +Q  W+  V+ Y    V  +LVGNKCD+ SL+EV+ V A+
Sbjct:   23 KIVLIGDCGVGKTCVVQRFKSGNFV------ERHGNTLGVDFSMKTVTVDGKKVKLQIWDTAGQERFRTITQSYYRSANGVIIVYDITKRSSFLGLQR-WIEEVRRYTASNVMLILVGNKCDMESLREVEFVEAE 150          
BLAST of jgi.p|Trimin1|157498 vs. uniprot
Match: UPI0013C4332C (ras-related protein Rab-1A isoform X1 n=1 Tax=Phocoena sinus TaxID=42100 RepID=UPI0013C4332C)

HSP 1 Score: 122 bits (307), Expect = 8.800e-32
Identity = 61/137 (44.53%), Postives = 86/137 (62.77%), Query Frame = 0
Query:    6 RLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAAQVC 142
            +L+++GD GVGK+ ++ R+       D      Y ST+GVDF  +T+ L+GK ++LQ+WDT+G  R+ ++ S Y   A G+ +VYD T  ESF  V+  WL  +  YA E V  LLVGNKCDLT+ K VD   A+VC
Sbjct:   13 KLLLIGDSGVGKSCLLLRFA------DDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKVC 142          
BLAST of jgi.p|Trimin1|157498 vs. uniprot
Match: E9G2G0_DAPPU (Uncharacterized protein n=6 Tax=Daphnia TaxID=6668 RepID=E9G2G0_DAPPU)

HSP 1 Score: 122 bits (306), Expect = 1.490e-31
Identity = 54/134 (40.30%), Postives = 92/134 (68.66%), Query Frame = 0
Query:    6 RLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAA 139
            ++V++GDCG+GKT++++R+ +G F         Y++T+GVDF  KT+ +EGK+V+LQ+WDT+G  R+ ++   Y  +A+GV LVYD T   SF  +Q  W+  ++ +    + ++L+GNKCD+ +L+EV+ V A
Sbjct:   19 KIVVIGDCGIGKTSLVQRFKSGVFT------ERYTNTIGVDFAMKTIVIEGKQVKLQIWDTAGQERFRTITQSYYRSANGVLLVYDITKRSSFLSLQK-WMEEIRRFTANNISWVLIGNKCDMDTLREVEQVEA 145          
BLAST of jgi.p|Trimin1|157498 vs. uniprot
Match: UPI00187DA68D (ras-related protein Rab-43 n=1 Tax=Bradysia coprophila TaxID=38358 RepID=UPI00187DA68D)

HSP 1 Score: 122 bits (306), Expect = 1.490e-31
Identity = 58/135 (42.96%), Postives = 88/135 (65.19%), Query Frame = 0
Query:    6 RLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAAQ 140
            ++V++GDC VGKT I++R+  G+F         +++T+GVDF  KT+ ++GKRV+ Q+WDT+G  R+ ++   Y  +ADGV +VYD T   SF  +Q  W+  V+ Y    V  +LVGNKCDL SL+EV+   A+
Sbjct:   23 KIVLIGDCSVGKTKIVQRFKTGHFT------ESHANTIGVDFSMKTITVDGKRVKTQIWDTAGQERFRTITQSYYRSADGVIIVYDITKRSSFLSIQR-WIEEVRRYTTLNVMLILVGNKCDLESLREVEFAEAE 150          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157498 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YYU6_9STRA1.120e-126100.00P-loop containing nucleoside triphosphate hydrolas... [more]
A0A3Q2KRL5_HORSE7.550e-3340.00RAB1A, member RAS oncogene family n=1 Tax=Equus ca... [more]
A0A834Y4U7_9HYME1.020e-3243.70Uncharacterized protein n=1 Tax=Aphidius gifuensis... [more]
A0A3B4BDA3_9GOBI2.480e-3244.53Uncharacterized protein n=1 Tax=Periophthalmus mag... [more]
A0A8J2RY20_9CRUS3.860e-3241.79Hypothetical protein n=1 Tax=Daphnia galeata TaxID... [more]
A0A1S3SXZ3_SALSA3.950e-3242.18ras-related protein ORAB-1-like n=1 Tax=Salmo sala... [more]
A0A482WIF0_LAOST5.880e-3243.70Uncharacterized protein n=2 Tax=Delphacidae TaxID=... [more]
UPI0013C4332C8.800e-3244.53ras-related protein Rab-1A isoform X1 n=1 Tax=Phoc... [more]
E9G2G0_DAPPU1.490e-3140.30Uncharacterized protein n=6 Tax=Daphnia TaxID=6668... [more]
UPI00187DA68D1.490e-3142.96ras-related protein Rab-43 n=1 Tax=Bradysia coprop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 52..74
score: 37.22
coord: 115..128
score: 51.98
coord: 34..50
score: 25.15
coord: 5..26
score: 38.03
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 5..162
e-value: 1.9E-29
score: 113.8
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 2..173
e-value: 2.4E-8
score: 5.9
NoneNo IPR availablePANTHERPTHR24073DRAB5-RELATEDcoord: 6..145
NoneNo IPR availablePANTHERPTHR24073:SF1125RE48347Pcoord: 6..145
NoneNo IPR availablePROSITEPS51419RABcoord: 1..179
score: 18.966194
NoneNo IPR availableCDDcd00154Rabcoord: 5..135
e-value: 3.82137E-51
score: 159.544
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 7..157
e-value: 5.0E-6
score: -40.5
IPR001806Small GTPasePFAMPF00071Rascoord: 6..143
e-value: 2.7E-32
score: 111.6
IPR001806Small GTPasePROSITEPS51421RAScoord: 1..179
score: 9.452846
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 4..135
e-value: 6.4E-20
score: 69.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 2..160
e-value: 6.4E-41
score: 141.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_3contigContig_3:1756589..1759091 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157498mRNA_473Tribonema minus UTEX_B_3156 mRNAContig_3 1756589..1759091 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|157498|e_gw1.3.285.1 ID=Trimin1|157498|e_gw1.3.285.1|Name=jgi.p|Trimin1|157498|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=180bp
MLSQVRLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCK
TVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQR
VQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAAQVCTASKCNCR
SSTCLAYSLPTSTLLPVRFMVLKFGLSAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase