Trimin1|156945|e_gw1.2.151.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|156945
Unique NameTrimin1|156945|e_gw1.2.151.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length277
Homology
[Close]
BLAST of jgi.p|Trimin1|156945 vs. uniprot
Match: A0A836CK20_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK20_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 3.170e-13
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 
Query:    1 MLSHVKAVHEGIKDIECEHPDCSRTFSDQGNMLXXXXXXXXXXXXXXCTD 50
            MLSHVKAVHEGIKDIECEHPDCSRTFSDQGNMLXXXXXXXXXXXXXXCTD
Sbjct:    1 MLSHVKAVHEGIKDIECEHPDCSRTFSDQGNMLXXXXXXXXXXXXXXCTD 50
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156945 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CK20_9STRA3.170e-13100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 191..216
e-value: 9.1E-4
score: 28.5
coord: 75..98
e-value: 0.016
score: 24.4
coord: 46..69
e-value: 3.8E-4
score: 29.8
coord: 253..276
e-value: 0.0011
score: 28.2
coord: 222..247
e-value: 2.0E-4
score: 30.7
coord: 104..127
e-value: 6.7E-4
score: 29.0
coord: 162..185
e-value: 0.0048
score: 26.1
coord: 15..40
e-value: 0.0026
score: 27.0
coord: 133..156
e-value: 0.0068
score: 25.6
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 192..216
e-value: 0.0097
score: 16.3
coord: 222..247
e-value: 0.013
score: 15.9
coord: 17..40
e-value: 0.012
score: 16.0
coord: 134..156
e-value: 0.0094
score: 16.4
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 48..69
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 255..276
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 193..216
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 224..247
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 106..127
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 77..98
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 135..156
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 17..40
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 164..185
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 222..252
score: 12.860899
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 46..74
score: 13.234995
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 253..277
score: 11.385298
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 15..45
score: 11.530781
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 104..132
score: 12.466019
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 162..190
score: 10.117529
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 75..103
score: 10.366926
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 133..161
score: 11.842525
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 191..221
score: 10.844938
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 192..217
e-value: 2.8E-7
score: 32.2
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 103..162
e-value: 6.0E-14
score: 53.8
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 254..277
e-value: 6.8E-5
score: 25.0
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 46..69
e-value: 3.5E-5
score: 24.3
coord: 104..127
e-value: 1.2E-4
score: 22.6
coord: 254..276
e-value: 5.4E-4
score: 20.6
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 163..190
e-value: 5.2E-6
score: 28.4
coord: 76..102
e-value: 2.2E-7
score: 32.8
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 218..253
e-value: 2.6E-9
score: 38.6
coord: 42..75
e-value: 1.2E-7
score: 33.3
coord: 2..41
e-value: 2.8E-8
score: 35.3
NoneNo IPR availablePANTHERPTHR24406TRANSCRIPTIONAL REPRESSOR CTCFL-RELATEDcoord: 4..194
coord: 69..276
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 6..55
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 84..142
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 201..262
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 40..93
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 133..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_2contigContig_2:1071745..1072575 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|156945mRNA_662Tribonema minus UTEX_B_3156 mRNAContig_2 1071745..1072575 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|156945|e_gw1.2.151.1 ID=Trimin1|156945|e_gw1.2.151.1|Name=jgi.p|Trimin1|156945|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=277bp
MLSHVKAVHEGIKDIECEHPDCSRTFSDQGNMLRHFKAVHEGIKDFQCTD
CGKMFDTKNHMLQHVKAVHDGVKDVQCTVCEKMFITKQVMLQHVKAVHEG
IKDFQCTDCDKMFDTKNHMLQHVKAVHDGVKDVQCTECDKMFSTGAYMRK
HVKVVHDGVKEVQCTECEKMFTTKQVMVKHVKAIHDCIKDVKCDYPDCSQ
TFSDKWNMQKHVKAVHEGIKDFECDHSDCNKKFSSKTNMLQHVKAVHNGI
KDVHCTTCNKTFSTESDMRKHVKAVHD
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf