Trimin1|156554|e_gw1.1.349.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|156554
Unique NameTrimin1|156554|e_gw1.1.349.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length160
Homology
BLAST of jgi.p|Trimin1|156554 vs. uniprot
Match: A0A836CNH0_9STRA (tRNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH0_9STRA)

HSP 1 Score: 307 bits (786), Expect = 1.570e-105
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
Query:    1 MQERSHAVRPLHHREVAVSTALGEEATDSADVPALQPDVSVASYEALDIRVGRIVKAETVPDPDHGNKPSRKYLSLVVALGNEFRSIISGVRPVFDVEEAIGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPVPPGSQVTGL 159
            MQERSHAVRPLHHREVAVSTALGEEATDSADVPALQPDVSVASYEALDIRVGRIVKAETVPDPDHGNKPSRKYLSLVVALGNEFRSIISGVRPVFDVEEAIGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPVPPGSQVTGL
Sbjct:    1 MQERSHAVRPLHHREVAVSTALGEEATDSADVPALQPDVSVASYEALDIRVGRIVKAETVPDPDHGNKPSRKYLSLVVALGNEFRSIISGVRPVFDVEEAIGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPVPPGSQVTGL 159          
BLAST of jgi.p|Trimin1|156554 vs. uniprot
Match: D7G8W1_ECTSI (tRNA-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W1_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 3.150e-61
Identity = 99/144 (68.75%), Postives = 117/144 (81.25%), Query Frame = 0
Query:   16 VAVSTALGEEATDSADVPALQPDVSVASYEALDIRVGRIVKAETVPDPDHGNKPSRKYLSLVVALGNEFRSIISGVRPVFDVEEAIGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPVPPGSQVTGL 159
            +AVS A  EE ++  DVP L+  V++A +EALDIRVGRIV AE +PDPDHGNKPSRKYLSLVV LGNE R ++S VR + DVE+AIGK+VL+ AN EEE ILG PSRG+LL  +N+SK PMPRTLRTVLLGGG VPPGS V+GL
Sbjct:    3 MAVSHAAAEEISNMEDVPKLKDPVAIADFEALDIRVGRIVLAELIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL 146          
BLAST of jgi.p|Trimin1|156554 vs. uniprot
Match: A0A7S0MGA1_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MGA1_9CRYP)

HSP 1 Score: 144 bits (364), Expect = 1.060e-40
Identity = 71/134 (52.99%), Postives = 101/134 (75.37%), Query Frame = 0
Query:   24 EEATDSADVPALQPDVSVASYEALDIRVGRIVKAETVPDPDHGNKPSRKYLSLVVALGNEFRSIISGVRPVFDVEEAIGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPVPPGSQVT 157
            E+  D +D+P ++ +VS A  ++LDIRVGRI +A+ +PDP+H  KPSRKYL L+V +G E R+I++  R ++DVEE+IG+SVLV  N E++ +LG  S GRLL A+N ++ P+PRTLRTVL  GG +PPGS V+
Sbjct:   71 EDNLDPSDIPPVKDEVSNALLDSLDIRVGRIERADLIPDPEHEMKPSRKYLRLIVNIGTEKRTIVAASRGIYDVEESIGRSVLVACNVEQQTVLGVASHGRLLSASNPTRRPIPRTLRTVLSKGGGLPPGSPVS 204          
BLAST of jgi.p|Trimin1|156554 vs. uniprot
Match: A0A2R6X722_MARPO (tRNA-binding domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X722_MARPO)

HSP 1 Score: 110 bits (276), Expect = 2.410e-27
Identity = 63/140 (45.00%), Postives = 85/140 (60.71%), Query Frame = 0
Query:   24 EEATDSADVPALQPDVSVASYEALDIRVGRIVKAETVPDPDHGNKP-----SRKYLSLVVALGNEFRSIISGVRPVFDVEEAIGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPVPPGSQVTG 158
            E A      PA++P+V V+++E+LDIRVG I  A+ V DP+   K      SRK+L L V +G E R ++S  + V DVE+A+GK VL VAN     +LG  S G LL   NY   PMPR+ + +L G G +PPGS+V G
Sbjct:   73 EVAVSRTACPAVKPEVDVSTFESLDIRVGLITDAKAVADPEMSAKRGVPTMSRKHLQLTVDIGCEERIVVSECKYVMDVEDAVGKKVLFVANVPPCEVLGITSHGMLLTGFNYDPTPMPRSFKVILPGLGRLPPGSEVKG 212          
BLAST of jgi.p|Trimin1|156554 vs. uniprot
Match: A0A2K1L6P8_PHYPA (tRNA-binding domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L6P8_PHYPA)

HSP 1 Score: 108 bits (271), Expect = 1.550e-26
Identity = 65/154 (42.21%), Postives = 89/154 (57.79%), Query Frame = 0
Query:   10 PLHHREVAVSTALGEEATDSADVPALQPDVSVASYEALDIRVGRIVKAETVPDPD---HGNKP--SRKYLSLVVALGNEFRSIISGVRPVFDVEEAIGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPVPPGSQVTG 158
            P  H      TA   E TD    PA++P+V  + +E++D+RVG I  A+ V D +      KP  SRK+L L V +G E R+I+S  + V DVE+A+GK VL+VAN     + G  S G +L   NY   PMPR+ + +L G G +PPGSQV G
Sbjct:   66 PGLHIRAHTETAEVPETTDRVACPAVKPEVDPSIFESVDVRVGLITDAKPVQDAEMTAKRGKPTLSRKFLQLTVDIGCEQRTIVSECKYVMDVEDAVGKKVLIVANVPPTEVNGIKSHGVVLTGFNYDPTPMPRSFKVILPGLGRLPPGSQVKG 219          
BLAST of jgi.p|Trimin1|156554 vs. uniprot
Match: A9TWI9_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TWI9_PHYPA)

HSP 1 Score: 105 bits (263), Expect = 2.250e-25
Identity = 63/152 (41.45%), Postives = 88/152 (57.89%), Query Frame = 0
Query:   10 PLHHREVAVSTALGEEATDSADVPALQPDVSVASYEALDIRVGRIVKAETVPDPD---HGNKP--SRKYLSLVVALGNEFRSIISGVRPVFDVEEAIGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPVPPGSQV 156
            P  H      TA   E TD    PA++P+V  + +E++D+RVG I  A+ V D +      KP  SRK+L L V +G E R+I+S  + V DVE+A+GK VL+VAN     + G  S G +L   NY   PMPR+ + +L G G +PPGSQ+
Sbjct:   38 PGLHIRAHTETAEVPETTDRVACPAVKPEVDPSIFESVDVRVGLITDAKPVQDAEMTAKRGKPTLSRKFLQLTVDIGCEQRTIVSECKYVMDVEDAVGKKVLIVANVPPTEVNGIKSHGVVLTGFNYDPTPMPRSFKVILPGLGRLPPGSQL 189          
BLAST of jgi.p|Trimin1|156554 vs. uniprot
Match: A0A176WMH6_MARPO (tRNA-binding domain-containing protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176WMH6_MARPO)

HSP 1 Score: 108 bits (271), Expect = 3.070e-25
Identity = 62/138 (44.93%), Postives = 84/138 (60.87%), Query Frame = 0
Query:   24 EEATDSADVPALQPDVSVASYEALDIRVGRIVKAETVPDPDHGNKP-----SRKYLSLVVALGNEFRSIISGVRPVFDVEEAIGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPVPPGSQV 156
            E A      PA++P+V V+++E+LDIRVG I  A+ V DP+   K      SRK+L L V +G E R ++S  + V DVE+A+GK VL VAN     +LG  S G LL   NY   PMPR+ + +L G G +PPGS+V
Sbjct:   73 EVAVSRTACPAVKPEVDVSTFESLDIRVGLITDAKAVADPEMSAKRGVPTMSRKHLQLTVDIGCEERIVVSECKYVMDVEDAVGKKVLFVANVPPCEVLGITSHGMLLTGFNYDPTPMPRSFKVILPGLGRLPPGSEV 210          
BLAST of jgi.p|Trimin1|156554 vs. uniprot
Match: A0A1Y1HKH6_KLENI (tRNA-binding domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HKH6_KLENI)

HSP 1 Score: 94.7 bits (234), Expect = 1.740e-21
Identity = 51/134 (38.06%), Postives = 77/134 (57.46%), Query Frame = 0
Query:   28 DSADVPALQPDVSVASYEALDIRVGRIVKAETVPDPDHGNKP-----SRKYLSLVVALGNEFRSIISGVRPVFDVEEAIGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPVPPGSQV 156
            D +  P ++  +  + +  +DIRVG +  A+ VPD +   K      SRK+L L V +G+E R+++S  + V DVE+A+GK VL VAN     + G  S G +L   NY   PMPR+ + +L G G +PPGS +
Sbjct:   38 DRSTCPKIKEQIGFSDFAKVDIRVGLVTDAKAVPDKEMTEKRGKPTMSRKFLQLKVDIGSETRTVVSQCKYVMDVEDAVGKKVLFVANLPPTEVEGITSHGLVLQGLNYDPTPMPRSFKVILPGLGKLPPGSPI 171          
BLAST of jgi.p|Trimin1|156554 vs. uniprot
Match: A0A662TGM8_9ARCH (Methionine--tRNA ligase subunit beta n=1 Tax=archaeon TaxID=1906665 RepID=A0A662TGM8_9ARCH)

HSP 1 Score: 75.1 bits (183), Expect = 1.280e-14
Identity = 47/122 (38.52%), Postives = 72/122 (59.02%), Query Frame = 0
Query:   35 LQPDVSVASYEALDIRVGRIVKAETVPDPDHGNKPSRKYLSLVVALGNEFRSIISGVRPVFDVEEAIGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPVPPGSQV 156
            +Q  + +  +E LDIRVG+I+KAE +P        + K L L V +GNE R +++G+   +  EE IGK ++V+ N + +VI G  S+G LL AA+ +  P+      +L    PVPPGS+V
Sbjct:    1 MQGLIDIREFEKLDIRVGKIIKAEKIPR-------TTKLLRLEVDVGNEIRQLVAGIAEEYSPEELIGKLIVVLVNLKPKVIRGVASQGMLL-AADVNGKPV------LLTTDKPVPPGSKV 108          
BLAST of jgi.p|Trimin1|156554 vs. uniprot
Match: A0A523QCY0_9EURY (Methionine--tRNA ligase n=2 Tax=Hadesarchaea archaeon TaxID=2250276 RepID=A0A523QCY0_9EURY)

HSP 1 Score: 76.6 bits (187), Expect = 2.560e-13
Identity = 48/130 (36.92%), Postives = 70/130 (53.85%), Query Frame = 0
Query:   27 TDSADVPALQPDVSVASYEALDIRVGRIVKAETVPDPDHGNKPSRKYLSLVVALGNEFRSIISGVRPVFDVEEAIGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPVPPGSQV 156
            TD+   P L+P  S+  +E LDIR+GR+ KAE +P        S+K L L + L  E R+I++G+   +  EE IGK V +V N E   ++G  S G LL A +  K        ++L    PV PG++V
Sbjct:  489 TDNPSKP-LKPRASIKDFEKLDIRIGRVTKAEKIPG-------SKKLLKLELELAGERRTIVAGIAEHYPSEELIGKQVAIVTNLEPVKLMGVKSEGMLLAAEDEGKI-------SILTADKPVKPGAKV 603          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156554 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CNH0_9STRA1.570e-105100.00tRNA-binding domain-containing protein n=1 Tax=Tri... [more]
D7G8W1_ECTSI3.150e-6168.75tRNA-binding domain-containing protein n=2 Tax=Ect... [more]
A0A7S0MGA1_9CRYP1.060e-4052.99Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A2R6X722_MARPO2.410e-2745.00tRNA-binding domain-containing protein n=1 Tax=Mar... [more]
A0A2K1L6P8_PHYPA1.550e-2642.21tRNA-binding domain-containing protein n=1 Tax=Phy... [more]
A9TWI9_PHYPA2.250e-2541.45Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A176WMH6_MARPO3.070e-2544.93tRNA-binding domain-containing protein n=1 Tax=Mar... [more]
A0A1Y1HKH6_KLENI1.740e-2138.06tRNA-binding domain-containing protein n=1 Tax=Kle... [more]
A0A662TGM8_9ARCH1.280e-1438.52Methionine--tRNA ligase subunit beta n=1 Tax=archa... [more]
A0A523QCY0_9EURY2.560e-1336.92Methionine--tRNA ligase n=2 Tax=Hadesarchaea archa... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002547tRNA-binding domainPFAMPF01588tRNA_bindcoord: 49..130
e-value: 1.9E-8
score: 34.3
IPR002547tRNA-binding domainPROSITEPS50886TRBDcoord: 43..157
score: 17.119736
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 37..156
e-value: 2.4E-18
score: 68.1
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 39..156
NoneNo IPR availablePANTHERPTHR11586TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBERcoord: 35..156
NoneNo IPR availablePANTHERPTHR11586:SF35METHIONYL-TRNA SYNTHETASE N-TERM HOMOLOG (METS-LIKE)coord: 35..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_1contigContig_1:1069907..1071728 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|156554mRNA_1083Tribonema minus UTEX_B_3156 mRNAContig_1 1069907..1071728 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|156554|e_gw1.1.349.1 ID=Trimin1|156554|e_gw1.1.349.1|Name=jgi.p|Trimin1|156554|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=160bp
MQERSHAVRPLHHREVAVSTALGEEATDSADVPALQPDVSVASYEALDIR
VGRIVKAETVPDPDHGNKPSRKYLSLVVALGNEFRSIISGVRPVFDVEEA
IGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPV
PPGSQVTGL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002547tRNA-bd_dom
IPR012340NA-bd_OB-fold