Trimin1|156512|e_gw1.1.387.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|156512
Unique NameTrimin1|156512|e_gw1.1.387.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length626
Homology
[Close]
BLAST of jgi.p|Trimin1|156512 vs. uniprot
Match: A0A835ZJ02_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ02_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.870e-23
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 
Query:    1 MNARLILAAGSRDGDGVRALLVQEAAVTASDGEGRTALMSAAIDGHIDCVRALLAHNAAVQV 62
            MNARLILAAGSRDGDGVRALLVQEAAVTASDGEGRTALMSAAIDGHIDCVRALLAHNAAVQV
Sbjct:    1 MNARLILAAGSRDGDGVRALLVQEAAVTASDGEGRTALMSAAIDGHIDCVRALLAHNAAVQV 62
[Close]
BLAST of jgi.p|Trimin1|156512 vs. uniprot
Match: A0A835YI19_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI19_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.480e-18
Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = 0 
Query:  573 MRAGADIGLPAEYTVVRHMITDMCEFIDIPDRLNEIVVAFAQRALQLRAPGPP 625
            MRAGADIGLPAEYTVVR MITDMCEFIDIP+R+NEIVVAFAQRALQ RA GPP
Sbjct:  398 MRAGADIGLPAEYTVVRDMITDMCEFIDIPERVNEIVVAFAQRALQARASGPP 450
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156512 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835ZJ02_9STRA2.870e-23100.00Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
A0A835YI19_9STRA2.480e-1890.57Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 482..511
e-value: 0.007
score: 25.6
coord: 274..303
e-value: 0.0086
score: 25.3
coord: 344..373
e-value: 0.003
score: 26.8
coord: 241..270
e-value: 1.6E-4
score: 31.1
coord: 138..167
e-value: 8.6E-5
score: 31.9
coord: 103..132
e-value: 0.002
score: 27.4
coord: 449..478
e-value: 0.0037
score: 26.5
coord: 379..408
e-value: 0.005
score: 26.1
coord: 208..237
e-value: 1.5E-4
score: 31.1
coord: 173..202
e-value: 0.0042
score: 26.3
coord: 414..443
e-value: 0.023
score: 23.9
coord: 552..581
e-value: 5.8
score: 15.9
coord: 68..97
e-value: 0.002
score: 27.4
coord: 517..546
e-value: 0.0074
score: 25.5
coord: 309..338
e-value: 0.014
score: 24.5
coord: 33..62
e-value: 9.7E-4
score: 28.4
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 379..443
e-value: 1.0E-11
score: 45.2
coord: 102..168
e-value: 5.9E-14
score: 52.4
coord: 173..237
e-value: 3.7E-12
score: 46.7
coord: 307..374
e-value: 1.2E-11
score: 45.0
coord: 518..580
e-value: 1.4E-6
score: 28.8
coord: 241..304
e-value: 1.9E-12
score: 47.6
coord: 6..96
e-value: 6.7E-16
score: 58.6
coord: 449..512
e-value: 7.5E-12
score: 45.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 103..135
score: 8.8966
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 482..514
score: 9.83145
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 208..240
score: 10.04513
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 33..65
score: 9.72461
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 68..100
score: 9.27054
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 274..306
score: 9.91158
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 414..446
score: 9.190411
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 552..584
score: 8.97673
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 309..341
score: 8.8966
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 138..170
score: 10.39236
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 173..205
score: 9.51093
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 241..273
score: 10.33894
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 379..411
score: 9.88487
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 449..481
score: 9.72461
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 201..303
e-value: 1.1E-29
score: 105.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 304..407
e-value: 1.2E-23
score: 85.4
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 488..596
e-value: 6.3E-22
score: 79.7
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 408..487
e-value: 3.6E-21
score: 77.6
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..96
e-value: 2.3E-21
score: 77.8
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 97..200
e-value: 4.8E-29
score: 103.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 307..580
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 5..372
NoneNo IPR availablePANTHERPTHR24184SI:CH211-189E2.2coord: 18..202
NoneNo IPR availablePANTHERPTHR24184:SF11SI:CH211-189E2.2coord: 206..436
coord: 382..574
NoneNo IPR availablePANTHERPTHR24184SI:CH211-189E2.2coord: 206..436
coord: 382..574
coord: 137..268
NoneNo IPR availablePANTHERPTHR24184:SF11SI:CH211-189E2.2coord: 137..268
coord: 18..202
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 379..408
score: 9.065006
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 68..95
score: 8.720098
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 173..202
score: 8.932349
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 138..167
score: 9.807884
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 103..128
score: 8.852755
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 482..511
score: 9.250726
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 33..62
score: 9.1446
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 241..272
score: 9.383383
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 274..303
score: 9.091537
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 208..239
score: 9.011944
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 414..443
score: 8.613973

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_1contigContig_1:1267869..1269746 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|156512mRNA_1111Tribonema minus UTEX_B_3156 mRNAContig_1 1267869..1269746 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|156512|e_gw1.1.387.1 ID=Trimin1|156512|e_gw1.1.387.1|Name=jgi.p|Trimin1|156512|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=626bp
MNARLILAAGSRDGDGVRALLVQEAAVTASDGEGRTALMSAAIDGHIDCV
RALLAHNAAVQVTAVDGEGTTALMWAATYGHLDCVTALLAHNAAVRVTAV
DEEGETALMSAAIDGHIDCVRALLAHNAVVQVTVVGGEGETALMSAAING
HIDCVRALLAHNAEVQVTAVDGEGETALLKAAMNGHVDCVTALLAHDAEV
QVTAVDGEGRTALIWAAKTGYVDCVRALLAHDAAVTAIDGKGRTALMVAA
MKGHVGCVEALLGHDAAVTAVDVEGKTALMKAATNGHVDCVTALLVHNAE
VQVTAADMEGRTAVMKAAMTGHIDCVTALLVHNAEVQVTAVDGERKTALM
WAANAGYVDCVRALLAHDAEVQVTAVVGKGRTALMRAAMNGHADTVTALL
AHDAEMQVTAADMEGRTALMKAAMQGHIDCVTRLLVHDAELQVTAVDGEG
KTALTWAASTGRADCVTALLAHDAAVTAVDRKGRTALMRAAMNGHVDSVT
ALLAHDAEVQVTAVDGRRRTALMWAARNGHVGCVAALLQHRAAKQVAAVD
RQGSTAFRLAVLGSHKSVIAKLMRAGADIGLPAEYTVVRHMITDMCEFID
IPDRLNEIVVAFAQRALQLRAPGPP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf