Trimin1|156304|gw1.102.124.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|156304
Unique Name	Trimin1\|156304\|gw1.102.124.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	147

Homology

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BLAST of jgi.p|Trimin1|156304 vs. uniprot
Match: A0A836CMX7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMX7_9STRA)

HSP 1 Score: 288 bits (737), Expect = 1.820e-98
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0

Query:    1 GHFHCAPWVALCEALHILLPQQHRAAAAGGSTLCAESRFRQSFPCAIADVLAGRHDLRAPLIAAVIDTATKASDANLVVTLADPTGKIQAVVHQQALFEHAGDLVTGAALALRRAAIWVSGPGTQRALNIHPDNIMAVFPVSTPMPS 147
            GHFHCAPWVALCEALHILLPQQHRAAAAGGSTLCAESRFRQSFPCAIADVLAGRHDLRAPLIAAVIDTATKASDANLVVTLADPTGKIQAVVHQQALFEHAGDLVTGAALALRRAAIWVSGPGTQRALNIHPDNIMAVFPVSTPMPS
Sbjct:    1 GHFHCAPWVALCEALHILLPQQHRAAAAGGSTLCAESRFRQSFPCAIADVLAGRHDLRAPLIAAVIDTATKASDANLVVTLADPTGKIQAVVHQQALFEHAGDLVTGAALALRRAAIWVSGPGTQRALNIHPDNIMAVFPVSTPMPS 147

[Close]

BLAST of jgi.p|Trimin1|156304 vs. uniprot
Match: D8LFD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFD2_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 1.030e-27
Identity = 63/147 (42.86%), Postives = 89/147 (60.54%), Query Frame = 0

Query:    1 GHFHCAPWVALCEALHILLPQQHRAAAAGGSTLCAESRFRQSFPCAIADVLAGRHDLRAPLIAAVIDTATKASDANLVVTLADPTGKIQAVVHQQALFEHAGDLVTGAALALRRAAIWVSGPGTQRALNIHPDNIMAVFPVSTPMPS 147
            GHF   PW++LC A+   + ++      G S   A   F +     + +VLAG  DLR P++ AVID+ TK S +++VV L DP+G+I+  +H   L EH   L  GAAL L+  +I+VSGPGT R LN+HPD ++AVFP  T  P+
Sbjct:   48 GHFTKGPWLSLCSAIDAPIAEE------GASGSKAVQAFLRGAVSPMLEVLAGDFDLRVPVVTAVIDSYTKLSISDVVVELVDPSGRIKGHLHPGCLEEHGPSLGPGAALLLKEVSIFVSGPGTTRLLNVHPDCVLAVFPADTSPPA 188

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|156304 vs. uniprot

BLAST of jgi.p|Trimin1|156304 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836CMX7_9STRA	1.820e-98	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
D8LFD2_ECTSI	1.030e-27	42.86	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028045	Homologous recombination OB-fold protein	PFAM	PF15072	HROB	coord: 58..140 e-value: 1.4E-16 score: 60.3
IPR028045	Homologous recombination OB-fold protein	PANTHER	PTHR14523	UNCHARACTERIZED PROTEIN C17ORF53 HOMOLOG	coord: 18..142

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_102	contig	Contig_102:132621..133061 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|156304	mRNA_11801	Tribonema minus UTEX_B_3156	mRNA	Contig_102 132621..133061 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|156304|gw1.102.124.1 ID=Trimin1|156304|gw1.102.124.1|Name=jgi.p|Trimin1|156304|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=147bp
GHFHCAPWVALCEALHILLPQQHRAAAAGGSTLCAESRFRQSFPCAIADV
LAGRHDLRAPLIAAVIDTATKASDANLVVTLADPTGKIQAVVHQQALFEH
AGDLVTGAALALRRAAIWVSGPGTQRALNIHPDNIMAVFPVSTPMPS

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR028045	HROB